Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_B01
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 153 1e-37
AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical ... 29 2.7
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 6.3
Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 28 8.3
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 28 8.3
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 28 8.3
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 8.3
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 8.3
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 28 8.3
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 8.3
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 153 bits (372), Expect = 1e-37
Identities = 69/133 (51%), Positives = 92/133 (69%), Gaps = 5/133 (3%)
Frame = -1
Query: 752 VILSRPFGQXXVXKFAAHTGXTXXXGRFTXRXFXNQIQXAFREPRLLIVFDPAQDHQPIT 573
V+ +RP+ Q + KFAAHTG T GRF+ NQIQ F+EPRLL++ DP DHQ +T
Sbjct: 76 VVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVT 135
Query: 572 EASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRW 393
EASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW+LARE+L LRG + R +
Sbjct: 136 EASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGF 195
Query: 392 -----DVVVDLFF 369
+++ DL+F
Sbjct: 196 VLEGKEIMPDLYF 208
>AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical
protein F39C12.4 protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 213 CCTRCSSCFWSTPCSRRMVCP 151
CCT CF ST CS VCP
Sbjct: 53 CCTN-EECFMSTECSYSAVCP 72
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 536 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 429
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -3
Query: 564 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 457
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
>Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical
protein F13E6.4 protein.
Length = 442
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/74 (24%), Positives = 28/74 (37%)
Frame = +3
Query: 336 HPFHFLQGSRXEEQINHNIPALVTGKHTTKPQHFTCQQPPHQTNRVGRLGVAWDSNVHKS 515
H H + Q+N + V + PQ Q PH N + V D N H+
Sbjct: 361 HTLHQIPNQYQNSQMNDDSAMEVDYSMVSHPQQLQHQHQPHMHNNMPSNYVIDDINPHEF 420
Query: 516 *WGVCVAQSNHRNV 557
+ ++ N+R V
Sbjct: 421 DQYLQISNDNNRGV 434
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = -1
Query: 542 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFXP 363
+L N ++ + V I + C + L W VLR G +W V ++F P
Sbjct: 552 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 609
Query: 362 *XLKKVKRMNNK 327
+KK K N++
Sbjct: 610 ASMKKTKTSNHR 621
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = -1
Query: 542 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFXP 363
+L N ++ + V I + C + L W VLR G +W V ++F P
Sbjct: 552 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 609
Query: 362 *XLKKVKRMNNK 327
+KK K N++
Sbjct: 610 ASMKKTKTSNHR 621
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = -1
Query: 542 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFXP 363
+L N ++ + V I + C + L W VLR G +W V ++F P
Sbjct: 534 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 591
Query: 362 *XLKKVKRMNNK 327
+KK K N++
Sbjct: 592 ASMKKTKTSNHR 603
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 164 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 259
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 485 TKSSHSIGLMWWLLA 441
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = -1
Query: 542 ALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFXP 363
+L N ++ + V I + C + L W VLR G +W V ++F P
Sbjct: 552 SLPNVEAEVSSVPIPVCCRPLLDNEPSLKIWCATGVVLR--GGRDERGQWIVGDPIYFAP 609
Query: 362 *XLKKVKRMNNK 327
+KK K N++
Sbjct: 610 ASMKKTKTSNHR 621
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 164 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 259
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,930,553
Number of Sequences: 27780
Number of extensions: 286798
Number of successful extensions: 802
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -