Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_A07
(768 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 140 7e-33
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 140 7e-33
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 140 7e-33
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 138 2e-32
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 136 1e-31
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 7.9
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 30 7.9
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 7.9
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 237 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 296
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 297 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 349
Score = 65.3 bits (152), Expect = 2e-10
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = -1
Query: 726 FPXFPLXVAXQSPGDQXXPNRLSXS*XAFKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 547
FP PL V + G + + KAW+DI KVY SQR+RAGKGKMRN RRIQR+
Sbjct: 147 FPELPLVVEDKVEGYKKTKEAVLLL-KKLKAWNDIKKVYASQRMRAGKGKMRN-RRIQRR 204
Query: 546 GPLIIFKQ 523
GP II+ +
Sbjct: 205 GPCIIYNE 212
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 140 bits (338), Expect = 7e-33
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 138 bits (334), Expect = 2e-32
Identities = 63/113 (55%), Positives = 81/113 (71%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS E
Sbjct: 252 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPE 311
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 312 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILCQARNHKLR 364
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 189 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 227
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 136 bits (328), Expect = 1e-31
Identities = 61/113 (53%), Positives = 80/113 (70%)
Frame = -2
Query: 446 LKLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDE 267
LKLAPGGH+GRF IW +SAF +LD L+G+W+ + K N+NLP +M NTDL+R+LKS E
Sbjct: 238 LKLAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNLPMHEMINTDLSRILKSPE 297
Query: 266 IRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 108
I++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
Score = 69.7 bits (163), Expect = 1e-11
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = -1
Query: 639 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFKQ 523
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+ +
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE 213
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 377 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 243
DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 26 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 70
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 400 LSPHSAGLTPYSGHGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSG 260
+ PH A L G G + K ++T P QR P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 377 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 243
DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 771 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 815
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,076,729
Number of Sequences: 237096
Number of extensions: 2056665
Number of successful extensions: 3991
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3989
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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