Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_P21
(889 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 229 3e-60
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 202 4e-52
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 143 2e-34
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 131 6e-31
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 92 5e-19
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 38 0.011
01_06_0073 + 26191822-26192116,26192227-26192445,26193655-261938... 34 0.13
03_06_0413 + 33756151-33756475,33756837-33756945,33757004-337570... 33 0.30
03_03_0178 - 15144449-15144623,15144776-15144887,15144988-15145087 30 2.1
01_06_0077 + 26215954-26216224,26216355-26216579,26217099-262172... 30 2.8
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 29 6.5
10_06_0127 - 11027692-11027826,11027925-11027993,11029925-110300... 28 8.6
08_02_0432 - 17103230-17103322,17103403-17103542,17104950-171052... 28 8.6
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 229 bits (559), Expect = 3e-60
Identities = 112/236 (47%), Positives = 160/236 (67%), Gaps = 6/236 (2%)
Frame = +1
Query: 46 PVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFG-KISEENIKNN 222
PV I SF +++ +N+++ V N N A F+F+++ + + +SYFG E+ I+NN
Sbjct: 49 PVRQIGGCSFLYMRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNN 108
Query: 223 FVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKS--ASKEEQAQI---TSQVTGQIGW 387
FVLIYELLDEI+DFG+PQN +LK +ITQ+G++S +SK + T QVTG +GW
Sbjct: 109 FVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGW 168
Query: 388 RREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIV 567
RREG+ Y++NE+FLD++E VNLLMS +G VL V GK++MK +LSGMP+ K G+NDKI
Sbjct: 169 RREGLMYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIG 228
Query: 568 MEAKGKGNGGISGNTDSDPARSGKPXXVIDDCQFHQCVKLXKFXTEHSISFIPPDG 735
+E + + S PA+SGK +DD FHQCV L +F +E ++SF+PPDG
Sbjct: 229 LEKEAQ--------LKSRPAKSGKTIE-LDDVTFHQCVNLTRFNSEKTVSFVPPDG 275
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 202 bits (492), Expect = 4e-52
Identities = 96/235 (40%), Positives = 154/235 (65%), Gaps = 1/235 (0%)
Frame = +1
Query: 34 QVRSPVT-NIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEEN 210
+ SPV + A ++ I+ N++L ++QN NAA + FL +++DV + YF ++ EE+
Sbjct: 47 EAHSPVVYDDAGVTYMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEES 106
Query: 211 IKNNFVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWR 390
+++NFV++YELLDE++DFG+PQ ++ +L FI + E + VT + WR
Sbjct: 107 LRDNFVVVYELLDEMMDFGYPQYTEAKILSEFIKTDAYRM---EVSQRPPMAVTNAVSWR 163
Query: 391 REGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVM 570
EGI+Y++NE+FLDV+E VN+L++ GQ++ + V G + M++YLSGMPECK G+ND++++
Sbjct: 164 SEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLL 223
Query: 571 EAKGKGNGGISGNTDSDPARSGKPXXVIDDCQFHQCVKLXKFXTEHSISFIPPDG 735
EA+G+ A GK +DD +FHQCV+L +F + +ISFIPPDG
Sbjct: 224 EAQGR-------------ATKGKAID-LDDIKFHQCVRLARFENDRTISFIPPDG 264
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 143 bits (346), Expect = 2e-34
Identities = 76/244 (31%), Positives = 137/244 (56%), Gaps = 14/244 (5%)
Frame = +1
Query: 46 PVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNF 225
PV N+ ++ H+K A ++ T NV+ +++ E L +I V + Y G ++E++++ NF
Sbjct: 49 PVFNVDGVNYIHVKVAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNEDSLRKNF 108
Query: 226 VLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSAS-------------KEEQAQITSQ 366
+L+YELLDE++DFG+PQ + T VLK++I + I + + + +
Sbjct: 109 ILVYELLDEVIDFGYPQTTSTEVLKSYIFNEPIMVDAGRLPPLGPAAMFMQGTKRMPGTA 168
Query: 367 VTGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKF 546
VT + G K +R E+F+D++E +++ S G +L++ + G + MKSYL+G PE +
Sbjct: 169 VTKSVVATEPGGK-KREEIFVDIIERISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRL 227
Query: 547 GINDKIVMEAKGKGNGGISGNTDSD-PARSGKPXXVIDDCQFHQCVKLXKFXTEHSISFI 723
+N+ + + G +G++ D + SG ++DDC FH+ V L F + ++ I
Sbjct: 228 ALNEDLSI--------GRTGSSSYDYRSSSGGGAVILDDCNFHESVHLDSFDIDRTLHLI 279
Query: 724 PPDG 735
PPDG
Sbjct: 280 PPDG 283
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 131 bits (317), Expect = 6e-31
Identities = 82/235 (34%), Positives = 135/235 (57%), Gaps = 1/235 (0%)
Frame = +1
Query: 34 QVRSPVTNI-ARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEEN 210
+V SPV + A S+ I+ N++L ++QN NAA + FL +++DV + YF ++ EE+
Sbjct: 48 EVLSPVVHDDAGVSYMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEES 107
Query: 211 IKNNFVLIYELLDEILDFGHPQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWR 390
+++NFV++Y E+LD + D G + +A I S+ +R
Sbjct: 108 LRDNFVVVY----ELLD----EMMDFGY-------------PQYTEAMILSEFIKTDAYR 146
Query: 391 REGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVM 570
E +FLDV+E VN+L++ GQ++ + V G++ M+++LSGMPECK G+ND++++
Sbjct: 147 ME--------VFLDVVESVNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLL 198
Query: 571 EAKGKGNGGISGNTDSDPARSGKPXXVIDDCQFHQCVKLXKFXTEHSISFIPPDG 735
EA+G+ GK +DD +FHQCV+L +F + +ISFIPPDG
Sbjct: 199 EAQGR-------------TTKGKAID-LDDIKFHQCVRLARFENDRTISFIPPDG 239
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 92.3 bits (219), Expect = 5e-19
Identities = 43/149 (28%), Positives = 83/149 (55%)
Frame = +1
Query: 124 NVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGHPQNSDTGVLKT 303
+VN F+FL ++ DV+ Y G ++E+ IK+NFVL+Y++LDE++D G P ++ +LK
Sbjct: 91 SVNMICDFQFLSRVADVLTDYLGDLNEDIIKDNFVLVYQILDEMMDNGFPLTTEPNILKE 150
Query: 304 FITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLS 483
I I S +T + WR +K NE++++++E ++ ++ +G ++
Sbjct: 151 MIAPPNIVSKMLN---VVTDAAASFVPWRTTVVKDASNEVYVNIVEELDACVNREGALVK 207
Query: 484 AHVAGKVVMKSYLSGMPECKFGINDKIVM 570
GK+ + S L G+PE ++ ++
Sbjct: 208 CEAYGKIQVNSSLPGVPELTLSFSNPTII 236
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +1
Query: 91 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGH 270
A+++ N V E + ++V+ YFG + E ++ NF Y +LDEIL G
Sbjct: 174 ASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEILIAGE 233
Query: 271 PQNSDTGVLKTFITQQ 318
Q S + I Q
Sbjct: 234 LQESSKKNVARLIAAQ 249
>01_06_0073 +
26191822-26192116,26192227-26192445,26193655-26193803,
26193910-26194186,26194683-26194963
Length = 406
Score = 34.3 bits (75), Expect = 0.13
Identities = 28/79 (35%), Positives = 40/79 (50%)
Frame = +1
Query: 370 TGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFG 549
TG + W E +Y N+L +D LE + L P ++ A G M+ +LS PE +FG
Sbjct: 261 TGCLRWMNEFSQYH-NKLLIDELEKLRKL-HPDVAIIYADYYG-AAMEVFLS--PE-QFG 314
Query: 550 INDKIVMEAKGKGNGGISG 606
I D + G G G+SG
Sbjct: 315 IKDPLTACCGGGGPYGVSG 333
>03_06_0413 +
33756151-33756475,33756837-33756945,33757004-33757058,
33757059-33757094,33757196-33757282,33757737-33757808
Length = 227
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 193 KISEENIKNNFVLIYELLDEILDFGHPQNSD-TGVLKTFITQQGIKSASKEEQAQI 357
++ E ++ NF Y +LDE+L G Q S+ VL+ TQ + A+KEE + +
Sbjct: 163 QVCELDLIFNFHKAYFILDEVLIAGELQESNKKAVLRLITTQDNLVEAAKEEASSL 218
>03_03_0178 - 15144449-15144623,15144776-15144887,15144988-15145087
Length = 128
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 520 LSGMPECKFGINDKIVMEAKGKGNGGISGNTDSDPARSG 636
+ G P G ND+I EA G GG G +D P R G
Sbjct: 3 VGGSPVLAAGANDEIGEEAMA-GGGGSVGESDGQPTRPG 40
>01_06_0077 +
26215954-26216224,26216355-26216579,26217099-26217247,
26217353-26217629,26217956-26218236
Length = 400
Score = 29.9 bits (64), Expect = 2.8
Identities = 33/113 (29%), Positives = 52/113 (46%)
Frame = +1
Query: 271 PQNSDTGVLKTFITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELFLDVLEYVN 450
P N G + ++ Q +S KE+ G + W E +Y N+L +D LE +
Sbjct: 228 PGNIPIGCIPMYLMQ--FESDKKEDY----EPKIGCLRWMNEFSQYH-NKLLVDELENLR 280
Query: 451 LLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMEAKGKGNGGISGN 609
L ++ A G M+ +LS PE +FGI D +V G+G G+S +
Sbjct: 281 KLHLDV-TIIYADYYG-AAMEVFLS--PE-RFGIEDPLVACCGGRGPYGVSAS 328
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = -1
Query: 505 PLSQPREQRALDLAVTSTS*HTLVHQGTARFVCT*CLHGASQSDQLLVR*SGLVPPWR 332
P S P +Q D V + S TL+ T RFVC C G + L + G PW+
Sbjct: 21 PASTPSQQNP-DAEVIALSPRTLM--ATNRFVCEVCNKGFQREQNLQLHRRGHNLPWK 75
>10_06_0127 -
11027692-11027826,11027925-11027993,11029925-11030011,
11030146-11030286
Length = 143
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/56 (19%), Positives = 30/56 (53%)
Frame = +1
Query: 91 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEIL 258
A+++ + N + EF+ +++ M +FG + E +I + ++ +L+E++
Sbjct: 64 ASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMV 119
>08_02_0432 -
17103230-17103322,17103403-17103542,17104950-17105211,
17105391-17105495,17105496-17105558,17106876-17107022
Length = 269
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 574 AKGKGNGGISGNTDSDPARSGKPXXVIDDCQFHQCVKLXKFXTEHSISFIPP 729
A G+G GG GN D R+ + D ++ + ++ S+ F+PP
Sbjct: 165 ADGRGGGGGGGNGGGDGGRARQRGDDDDTKKYDEIYRIFVNPCSGSMEFVPP 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,877,106
Number of Sequences: 37544
Number of extensions: 481019
Number of successful extensions: 1259
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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