Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_P17
         (910 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127507-1|BAC87013.1|  130|Homo sapiens protein ( Homo sapiens ...    32   2.5  
BC057784-1|AAH57784.1|  519|Homo sapiens FLJ14803 protein protein.     32   3.3  
BC045618-1|AAH45618.1|  561|Homo sapiens FLJ14803 protein protein.     32   3.3  
AK074732-1|BAC11168.1|  561|Homo sapiens protein ( Homo sapiens ...    32   3.3  
AK027709-1|BAB55314.1|  561|Homo sapiens protein ( Homo sapiens ...    32   3.3  
AK027678-1|BAB55289.1|  203|Homo sapiens protein ( Homo sapiens ...    32   3.3  

>AK127507-1|BAC87013.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45600 fis, clone BRTHA3020369. ).
          Length = 130

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +1

Query: 466 SQCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 606
           S C G PF  S+    S P++S HP +   +H    Q P  + QPPQ
Sbjct: 85  SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129


>BC057784-1|AAH57784.1|  519|Homo sapiens FLJ14803 protein protein.
          Length = 519

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 534 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGG 668
           PPSP+I   S  S +P     T+P  T+  +   +  L+G+ +GG
Sbjct: 129 PPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGG 173


>BC045618-1|AAH45618.1|  561|Homo sapiens FLJ14803 protein protein.
          Length = 561

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 534 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGG 668
           PPSP+I   S  S +P     T+P  T+  +   +  L+G+ +GG
Sbjct: 129 PPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGG 173


>AK074732-1|BAC11168.1|  561|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90251 fis, clone NT2RM4000115. ).
          Length = 561

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 534 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGG 668
           PPSP+I   S  S +P     T+P  T+  +   +  L+G+ +GG
Sbjct: 129 PPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGG 173


>AK027709-1|BAB55314.1|  561|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14803 fis, clone NT2RP4001442. ).
          Length = 561

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 534 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGG 668
           PPSP+I   S  S +P     T+P  T+  +   +  L+G+ +GG
Sbjct: 129 PPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGG 173


>AK027678-1|BAB55289.1|  203|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14772 fis, clone NT2RP3004332. ).
          Length = 203

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 534 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGG 668
           PPSP+I   S  S +P     T+P  T+  +   +  L+G+ +GG
Sbjct: 129 PPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGG 173


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,448,991
Number of Sequences: 237096
Number of extensions: 2463490
Number of successful extensions: 5692
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5684
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)