Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_P16
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 332 3e-91
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 332 3e-91
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 332 3e-91
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 332 3e-91
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 246 2e-65
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 246 2e-65
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 138 7e-33
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 138 7e-33
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 2.0
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 4.5
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 29 6.0
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 332 bits (815), Expect = 3e-91
Identities = 153/254 (60%), Positives = 183/254 (72%)
Frame = +3
Query: 45 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 224
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 225 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 404
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 405 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 584
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 585 NGGTIEDKVKWAREHLEKPIPGRFCVCPR*ND*LHWCHQGQRIQRCHFSLAHKEATRKXH 764
NGGTIE KV WAREHLEK + +G + K+ RK H
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 765 KGLRKVACIGAWHP 806
KGLRKVACIGAWHP
Sbjct: 246 KGLRKVACIGAWHP 259
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 649 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRXTRVLGKLPALELGILLXCRHCX 828
VD+VFAQDEMID I SRWHTKKLP + + L K+ +G R
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC--IGAWHPSRVAF 264
Query: 829 S---CWSKRYHXRTEMNKK 876
+ K +H RT +N K
Sbjct: 265 TVARAGQKGFHHRTIINNK 283
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 332 bits (815), Expect = 3e-91
Identities = 153/254 (60%), Positives = 183/254 (72%)
Frame = +3
Query: 45 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 224
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 225 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 404
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 405 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 584
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 585 NGGTIEDKVKWAREHLEKPIPGRFCVCPR*ND*LHWCHQGQRIQRCHFSLAHKEATRKXH 764
NGGTIE KV WAREHLEK + +G + K+ RK H
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 765 KGLRKVACIGAWHP 806
KGLRKVACIGAWHP
Sbjct: 246 KGLRKVACIGAWHP 259
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 649 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRXTRVLGKLPALELGILLXCRHCX 828
VD+VFAQDEMID I SRWHTKKLP + + L K+ +G R
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC--IGAWHPSRVAF 264
Query: 829 S---CWSKRYHXRTEMNKK 876
+ K +H RT +N K
Sbjct: 265 TVARAGQKGFHHRTIINNK 283
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 332 bits (815), Expect = 3e-91
Identities = 153/254 (60%), Positives = 183/254 (72%)
Frame = +3
Query: 45 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 224
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 225 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 404
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 405 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 584
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 585 NGGTIEDKVKWAREHLEKPIPGRFCVCPR*ND*LHWCHQGQRIQRCHFSLAHKEATRKXH 764
NGGTIE KV WAREHLEK + +G + K+ RK H
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 765 KGLRKVACIGAWHP 806
KGLRKVACIGAWHP
Sbjct: 246 KGLRKVACIGAWHP 259
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 649 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRXTRVLGKLPALELGILLXCRHCX 828
VD+VFAQDEMID I SRWHTKKLP + + L K+ +G R
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC--IGAWHPSRVAF 264
Query: 829 S---CWSKRYHXRTEMNKK 876
+ K +H RT +N K
Sbjct: 265 TVARAGQKGFHHRTIINNK 283
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 332 bits (815), Expect = 3e-91
Identities = 153/254 (60%), Positives = 183/254 (72%)
Frame = +3
Query: 45 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 224
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 225 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 404
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 405 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 584
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 585 NGGTIEDKVKWAREHLEKPIPGRFCVCPR*ND*LHWCHQGQRIQRCHFSLAHKEATRKXH 764
NGGTIE KV WAREHLEK + +G + K+ RK H
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 765 KGLRKVACIGAWHP 806
KGLRKVACIGAWHP
Sbjct: 246 KGLRKVACIGAWHP 259
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 649 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRXTRVLGKLPALELGILLXCRHCX 828
VD+VFAQDEMID I SRWHTKKLP + + L K+ +G R
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC--IGAWHPSRVAF 264
Query: 829 S---CWSKRYHXRTEMNKK 876
+ K +H RT +N K
Sbjct: 265 TVARAGQKGFHHRTIINNK 283
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 246 bits (602), Expect = 2e-65
Identities = 107/163 (65%), Positives = 127/163 (77%)
Frame = +3
Query: 45 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 224
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 225 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 404
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 405 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 533
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 741 KEATRKXHKGLRKVACIGAWHP 806
K+ RK HKGLRKVACIGAWHP
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHP 211
Score = 34.3 bits (75), Expect = 0.12
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 658 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRXTRVLGKLPALELGILLXCRHCXS-- 831
V A +MID I SRWHTKKLP + + L K+ +G R +
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC--IGAWHPSRVAFTVA 219
Query: 832 -CWSKRYHXRTEMNKK 876
K +H RT +N K
Sbjct: 220 RAGQKGFHHRTIINNK 235
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 246 bits (602), Expect = 2e-65
Identities = 107/163 (65%), Positives = 127/163 (77%)
Frame = +3
Query: 45 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 224
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 225 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 404
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 405 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 533
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 741 KEATRKXHKGLRKVACIGAWHP 806
K+ RK HKGLRKVACIGAWHP
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHP 211
Score = 34.3 bits (75), Expect = 0.12
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 658 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRXTRVLGKLPALELGILLXCRHCXS-- 831
V A +MID I SRWHTKKLP + + L K+ +G R +
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC--IGAWHPSRVAFTVA 219
Query: 832 -CWSKRYHXRTEMNKK 876
K +H RT +N K
Sbjct: 220 RAGQKGFHHRTIINNK 235
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 138 bits (333), Expect = 7e-33
Identities = 68/123 (55%), Positives = 82/123 (66%)
Frame = +3
Query: 438 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 617
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 618 AREHLEKPIPGRFCVCPR*ND*LHWCHQGQRIQRCHFSLAHKEATRKXHKGLRKVACIGA 797
AREHLEK + +G + K+ RK HKGLRKVACIGA
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGA 158
Query: 798 WHP 806
WHP
Sbjct: 159 WHP 161
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 649 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRXTRVLGKLPALELGILLXCRHCX 828
VD+VFAQDEMID I SRWHTKKLP + + L K+ +G R
Sbjct: 109 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC--IGAWHPSRVAF 166
Query: 829 S---CWSKRYHXRTEMNKK 876
+ K +H RT +N K
Sbjct: 167 TVARAGQKGFHHRTIINNK 185
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 45 FQHPXHGSMGFYPKKRSRRHRGKVKAFPK 131
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 138 bits (333), Expect = 7e-33
Identities = 68/123 (55%), Positives = 82/123 (66%)
Frame = +3
Query: 438 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 617
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 618 AREHLEKPIPGRFCVCPR*ND*LHWCHQGQRIQRCHFSLAHKEATRKXHKGLRKVACIGA 797
AREHLEK + +G + K+ RK HKGLRKVACIGA
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGA 158
Query: 798 WHP 806
WHP
Sbjct: 159 WHP 161
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 649 VDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRXTRVLGKLPALELGILLXCRHCX 828
VD+VFAQDEMID I SRWHTKKLP + + L K+ +G R
Sbjct: 109 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC--IGAWHPSRVAF 166
Query: 829 S---CWSKRYHXRTEMNKK 876
+ K +H RT +N K
Sbjct: 167 TVARAGQKGFHHRTIINNK 185
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 45 FQHPXHGSMGFYPKKRSRRHRGKVKAFPK 131
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 270 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 398
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 251 GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 418
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +1
Query: 553 KRRLTLWKSNLTVVPSRTK*NGPENIWRNLSL------VDSVFAQD-EMIDC 687
K RL L K +V S K GP+ W N+ L ++S+F D + IDC
Sbjct: 473 KNRLNLSKEEKELVSSYMKNQGPQKKWENMPLHETSIRINSLFYVDGKKIDC 524
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,752,368
Number of Sequences: 27780
Number of extensions: 449808
Number of successful extensions: 1103
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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