Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_P15
(895 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 50 3e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 2e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 43 3e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 4e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 8e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 42 8e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 39 5e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 39 5e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 39 7e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 37 3e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 31 0.014
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.17
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.17
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.93
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 3.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.7
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 50.0 bits (114), Expect = 3e-08
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Frame = +1
Query: 91 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 249
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 250 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 387
+ L+ W D + W+ E+G T L V SE +W PD+VL N A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113
Score = 27.1 bits (57), Expect = 0.23
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +2
Query: 485 CSVD--NWPNDMQTCTFKFGSRMHNSDEMD 568
C +D +P D QTC KFGS ++ ++D
Sbjct: 145 CEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.8 bits (106), Expect = 3e-07
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Frame = +1
Query: 136 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 300
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 301 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 441
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 28.7 bits (61), Expect = 0.076
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 485 CSVD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 577
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 179 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.8 bits (106), Expect = 3e-07
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Frame = +1
Query: 136 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 300
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 301 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 441
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 28.7 bits (61), Expect = 0.076
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 485 CSVD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 577
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 179 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 46.4 bits (105), Expect = 4e-07
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Frame = +1
Query: 79 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 237
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 238 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 387
T + ++ W D +L WN ++G T V SE +W PD+VL N A
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
Score = 25.4 bits (53), Expect = 0.71
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 491 VDNWPNDMQTCTFKFGSRMHNSDEMD 568
V+ +P D QTC KFGS ++ +D
Sbjct: 149 VEYFPFDEQTCFMKFGSWTYDGYTVD 174
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGS 441
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
Score = 28.7 bits (61), Expect = 0.076
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 485 CSVD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 577
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 8e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +1
Query: 109 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 273
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 274 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 375
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 26.6 bits (56), Expect = 0.31
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 482 LCSVDN--WPNDMQTCTFKFGSRMHNSDEM 565
+C D+ WP D+ CT S H S+E+
Sbjct: 158 VCEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGS 441
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 485 CSVD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 577
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGS 441
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 27.9 bits (59), Expect = 0.13
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 485 CSVD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 577
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGS 441
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 28.7 bits (61), Expect = 0.076
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 485 CSVD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 577
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGS 441
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 27.9 bits (59), Expect = 0.13
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 485 CSVD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 577
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGS 441
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 485 CSVD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 577
C +D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 44.0 bits (99), Expect = 2e-06
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Frame = +1
Query: 109 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 267
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 268 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 387
++ +W D +L W+ E+G L V S+ +WRPD+VL N A
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
Score = 27.5 bits (58), Expect = 0.17
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 491 VDNWPNDMQTCTFKFGSRMHNSDEMD 568
V+ +P D QTC KFGS ++ ++D
Sbjct: 153 VEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 43.6 bits (98), Expect = 2e-06
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Frame = +1
Query: 88 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 252
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 253 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 426
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 427 SNNGS 441
NNG+
Sbjct: 131 KNNGT 135
Score = 25.4 bits (53), Expect = 0.71
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 485 CSVD-NW-PNDMQTCTFKFGSRMHNSDEMD 568
C +D W P D Q C KFGS ++ ++D
Sbjct: 148 CKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 43.2 bits (97), Expect = 3e-06
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +1
Query: 136 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 300
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 387
WN E+G L V SE +W PD+VL N A
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
Score = 28.3 bits (60), Expect = 0.10
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 488 SVDNWPNDMQTCTFKFGSRMHNSDEMD 568
+V+ +P D Q+C KFGS +N ++D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 42.7 bits (96), Expect = 4e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 282
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 283 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 381
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 488 SVDNWPNDMQTCTFKFGS 541
+++N+P D Q C +FGS
Sbjct: 133 NLENFPMDTQRCPLQFGS 150
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.9 bits (94), Expect = 8e-06
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 136 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 387
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
Score = 27.1 bits (57), Expect = 0.23
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +2
Query: 485 CSVDN--WPNDMQTCTFKFGSRMHNSDEMD 568
CS+D +P D+QTC K GS ++ ++D
Sbjct: 153 CSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.9 bits (94), Expect = 8e-06
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 136 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 387
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
Score = 27.1 bits (57), Expect = 0.23
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 491 VDNWPNDMQTCTFKFGSRMHNSDEMD 568
V+ +P D QTC KFGS ++ ++D
Sbjct: 157 VEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 39.1 bits (87), Expect = 5e-05
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 187 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 360
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 361 PDVVLLNAAATTAGDYALR 417
PD+VL N A G+Y +R
Sbjct: 111 PDIVLFNNA---DGNYEVR 126
Score = 31.1 bits (67), Expect = 0.014
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 476 QFLCSVD--NWPNDMQTCTFKFGSRMHNSDEMDFVI 577
Q C++D +P D QTC KFGS N D++ +
Sbjct: 148 QSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL 183
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 39.1 bits (87), Expect = 5e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 190 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 366
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 367 VVLLNAA 387
+L N A
Sbjct: 92 TILYNNA 98
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.7 bits (86), Expect = 7e-05
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 282
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 435
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 436 GSVSXIKRLDISTPISMQCRQLAQRHADLHVQV 534
GS++ RL I+ M + H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 282
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 435
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 436 GSVSXIKRLDISTPISMQCRQLAQRHADLHVQV 534
GS++ RL I+ M + H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 36.7 bits (81), Expect = 3e-04
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Frame = +1
Query: 124 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 288
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 289 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSXIKR 459
RLS+ S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 460 LDISTPISMQCR 495
L I M+ R
Sbjct: 156 LTIKAKCPMELR 167
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 31.1 bits (67), Expect = 0.014
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 485 CSVD--NWPNDMQTCTFKFGSRMHNSDEMDFVI*QK 586
C+ D +WP D C FGS +H+ +E++ + +K
Sbjct: 169 CATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKK 204
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 27.5 bits (58), Expect = 0.17
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +2
Query: 455 SAWTLALQFLCSVDNWPNDMQTCTFKFGSRMHNSDEMDFV 574
S TL L +++P+D Q C+ S H + ++ F+
Sbjct: 124 SKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.5 bits (58), Expect = 0.17
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 467 LALQFLCSVDN--WPNDMQTCTFKFGSRMHNSDEMDF 571
L L+ C+++ +P+D Q C + S H +DEM F
Sbjct: 157 LTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIF 193
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.93
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 55 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 159
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 549 CILEPNLNVQVCMSLGQLSTLHRNWSANVQALY 451
C L PN + VC+ + + HR A+ +Y
Sbjct: 93 CELSPNSTIAVCVCMRKCPRRHRPVCASNGKIY 125
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 333 PSAAAPFPCVPTQS 292
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,001
Number of Sequences: 438
Number of extensions: 4448
Number of successful extensions: 79
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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