Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_P12
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 50 2e-06
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 50 2e-06
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 50 3e-06
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 49 4e-06
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 49 4e-06
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 46 4e-05
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 46 5e-05
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 46 5e-05
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 46 5e-05
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 46 5e-05
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 44 1e-04
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 44 2e-04
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 44 2e-04
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 44 2e-04
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 44 2e-04
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 43 3e-04
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 43 3e-04
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 43 3e-04
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 41 0.001
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 41 0.001
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 41 0.001
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 41 0.001
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 40 0.002
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 40 0.002
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 40 0.002
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 40 0.002
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 40 0.003
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 40 0.003
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 40 0.003
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 39 0.006
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 39 0.006
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 39 0.006
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 39 0.006
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 38 0.007
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 38 0.007
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 38 0.007
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 38 0.007
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 38 0.010
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 38 0.013
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 38 0.013
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 37 0.017
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 37 0.022
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 36 0.029
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 36 0.029
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 36 0.029
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 36 0.039
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 36 0.039
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 36 0.039
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 36 0.039
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 36 0.039
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 36 0.039
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 36 0.051
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 36 0.051
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 36 0.051
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 35 0.068
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 35 0.068
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 35 0.090
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 35 0.090
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 33 0.21
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 33 0.21
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 33 0.21
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 33 0.27
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 33 0.27
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 33 0.27
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 33 0.36
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 33 0.36
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 32 0.48
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 32 0.63
AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 32 0.63
AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 32 0.63
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 31 0.84
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 31 1.1
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 31 1.1
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 31 1.1
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 30 2.6
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 30 2.6
U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 29 5.9
AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine... 29 5.9
Z49912-7|CAI70412.1| 554|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z49912-6|CAA90137.1| 615|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +2
Query: 137 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 313
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 314 EWG--CSTWLVSSERXWRPDVVLVNAXA 391
+G TW + ++ W PD+++ N A
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLA 156
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +2
Query: 137 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 313
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 314 EWG--CSTWLVSSERXWRPDVVLVNAXA 391
+G TW + ++ W PD+++ N A
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLA 156
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +2
Query: 137 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 313
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 314 EWG--CSTWLVSSERXWRPDVVLVNAXA 391
+G TW + ++ W PD+++ N A
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLA 156
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Frame = +2
Query: 41 NVDDLYYSCYRFLLTCAIASAAECENAT-SLSLMIDSLLATYDRESPPDSKIVVNLTLHL 217
N+ + + + F+ T + A E S S + LL +++ SPPD ++ ++ + L
Sbjct: 40 NMQCSFLTIFIFITTVTVGVAEFSEQYQGSSSRLTRHLLEKHNKCSPPDGRVDISHNIEL 99
Query: 218 RHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCS-TWLVSSERXWRPDVVLVN 382
H I E +++L + W D LSW E+ G TWL W PD+++ N
Sbjct: 100 VHIIGINELNQNMQVLVYIVQQWTDASLSWKVEEFRGIKHTWL-PEHSIWIPDIIVFN 156
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +2
Query: 137 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 313
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 314 EWG--CSTWLVSSERXWRPDVVLVN 382
+G TW + ++ W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Frame = +2
Query: 74 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRE 238
FLL I +S ++++LL Y++ P + V +L R ++ E
Sbjct: 11 FLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDE 70
Query: 239 SESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRPDVVLVN 382
+ L+M W DK+L+WN +WG ++ + S++ W PD+VL N
Sbjct: 71 VNQVLTTSLWLEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYN 119
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +2
Query: 137 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 313
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 314 EWG--CSTWLVSSERXWRPDVVLVN 382
+G TW + ++ W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +2
Query: 137 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 313
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 314 EWG--CSTWLVSSERXWRPDVVLVN 382
+G TW + ++ W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 46.0 bits (104), Expect = 4e-05
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 161 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL- 337
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 338 VSSERXWRPDV 370
+ ++ W P +
Sbjct: 123 MKQDKVWSPTI 133
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 45.6 bits (103), Expect = 5e-05
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Frame = +2
Query: 68 YRFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 232
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 233 RESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWRPDVVLVN 382
E + + L+ WID++LSW+ + G + V E W PD+VL N
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYN 117
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 45.6 bits (103), Expect = 5e-05
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Frame = +2
Query: 68 YRFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 232
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 233 RESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWRPDVVLVN 382
E + + L+ WID++LSW+ + G + V E W PD+VL N
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYN 117
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 45.6 bits (103), Expect = 5e-05
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Frame = +2
Query: 68 YRFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 232
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 233 RESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWRPDVVLVN 382
E + + L+ WID++LSW+ + G + V E W PD+VL N
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYN 117
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 45.6 bits (103), Expect = 5e-05
Identities = 21/100 (21%), Positives = 44/100 (44%)
Frame = +2
Query: 98 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 277
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 278 NWIDKRLSWNAGEWGCSTWLVSSERXWRPDVVLVNAXATT 397
+W D +SW+ +WG S + W P++V +N +T+
Sbjct: 114 SWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQINGGSTS 153
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWG-CSTWLVSSERXWRPDVVLVN 382
L +NW+D RLSWN W + R W+PD++LVN
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVN 203
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Frame = +2
Query: 77 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 241
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 242 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRPDVVLVNAXAT 394
V + A L W D L W+ E+G T + + + W+PDV+L N+ T
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDT 117
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Frame = +2
Query: 77 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 241
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 242 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRPDVVLVNAXAT 394
V + A L W D L W+ E+G T + + + W+PDV+L N+ T
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDT 117
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Frame = +2
Query: 77 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 241
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 242 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRPDVVLVNAXAT 394
V + A L W D L W+ E+G T + + + W+PDV+L N+ T
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDT 117
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Frame = +2
Query: 77 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 241
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 242 ESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRPDVVLVNAXAT 394
V + A L W D L W+ E+G T + + + W+PDV+L N+ T
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDT 117
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERXWRPDVVLVN 382
N+ E ++ L M W D +L+WN E+G S V S+R W PD+VL N
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFN 151
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERXWRPDVVLVN 382
N+ E ++ L M W D +L+WN E+G S V S+R W PD+VL N
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFN 151
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRPDVVLVN 382
++ E + + + L +W+D RLSWN E+G T + E W PD++L N
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYN 96
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +2
Query: 137 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 301
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 302 WNAGEW-GCSTWLVSSERXWRPDVVLVN 382
W+ E+ G V S+ W PDVVL N
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYN 117
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 176 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSER 352
PP +++ + + + L+ ++ E E V L D W D+RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 353 XWRPDVVLVNA 385
W P+V + +A
Sbjct: 110 IWLPEVTIADA 120
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +2
Query: 137 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 301
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 302 WNAGEW-GCSTWLVSSERXWRPDVVLVN 382
W+ E+ G V S+ W PDVVL N
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYN 117
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +2
Query: 140 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 298
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 299 SWNAGEWGCSTWLVS-SERXWRP 364
SWNA ++ T + + E+ W P
Sbjct: 110 SWNASDYKNVTAIFTRQEKIWSP 132
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Frame = +2
Query: 137 MIDSLLATYDRESPP--DSK--IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 301
+I+ L++ Y RE P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 302 WNAGEWGCSTWL-VSSERXWRPDVVLVNA 385
W + T L + W PD++L N+
Sbjct: 85 WEPTAYENVTDLRHPPDALWTPDILLYNS 113
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRPDVVLVN 382
L+M W D RL W+ G WG L V ++ W PD++L N
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYN 115
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Frame = +2
Query: 53 LYYSCYRFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLR 220
+ ++ +L+ I + C+ + + + + LL Y+ P + V + L L+
Sbjct: 1 MIFNLINSILSLVIIHSNLCDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQ 60
Query: 221 HA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLV---SSERXWRPDVVLVNAX 388
++ E V + A L W D +L W ++G + SS+ W+PDV+L N+
Sbjct: 61 QILDVDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYNSA 120
Query: 389 A 391
A
Sbjct: 121 A 121
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Frame = +2
Query: 56 YYSCYRFLLTCAIASAAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHL 217
+Y+ + +L +IA CEN +L S +++ + YDR P ++VN+T+ L
Sbjct: 44 FYALFSHILFFSIA--LNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVL 101
Query: 218 RHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWRPDVVLVNA 385
++E++ + W D RLSW+ ++ G +V W P + + N+
Sbjct: 102 GILIELKENQQLAAYVISHTQRWYDGRLSWDPSKYRGQREVIVPQTMVWIPKLFVYNS 159
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Frame = +2
Query: 53 LYYSCYRFL---LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTL 211
L Y C+ L L+ A T + + + L Y +E P + V +
Sbjct: 2 LIYPCFLILWQILSSHRVHATSHPARTPMRNLYEHLFLDYVKEIRPVRNESESLKVEIKF 61
Query: 212 HLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERXWRPDVVLVN 382
L+ + E + V I L++ WID+ L+W+ ++G S V + + W+PDV++ N
Sbjct: 62 WLKQILKVDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYN 120
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Frame = +2
Query: 53 LYYSCYRFL---LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTL 211
L Y C+ L L+ A T + + + L Y +E P + V +
Sbjct: 2 LIYPCFLILWQILSSHRVHATSHPARTPMRNLYEHLFLDYVKEIRPVRNESESLKVEIKF 61
Query: 212 HLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERXWRPDVVLVN 382
L+ + E + V I L++ WID+ L+W+ ++G S V + + W+PDV++ N
Sbjct: 62 WLKQILKVDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYN 120
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 176 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSER 352
PP +I + L++ ++ + E E L D + +W D RLSW+ ++G + V +
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSK 137
Query: 353 XWRPDVVLVN 382
W P+ +V+
Sbjct: 138 VWIPETTIVD 147
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 203 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWRP 364
L +L+ ++E E V ++ +L W D RLSWN+ + T V E+ W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Frame = +2
Query: 74 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRE 238
F L + + E + T + D L+ YD P + +++N++++ +
Sbjct: 10 FYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDP 69
Query: 239 SESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-XWRPDVVLVNAXAT 394
+E T+ ++ + W D+ L WN ++ TWL E W PD + + T
Sbjct: 70 AEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTVSTSIDT 121
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 170 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 346
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 347 ERXWRPDVVLVN 382
E+ W PD+VL N
Sbjct: 118 EKVWLPDIVLFN 129
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 170 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 346
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 347 ERXWRPDVVLVN 382
E+ W PD+VL N
Sbjct: 118 EKVWLPDIVLFN 129
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 170 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 346
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 347 ERXWRPDVVLVN 382
E+ W PD+VL N
Sbjct: 118 EKVWLPDIVLFN 129
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +2
Query: 92 IASAAECENATSLSLMIDSLLATYDRE-SPPDSKIVVNLTLH-LRHANIRESESTVRILA 265
+ + A E + + +L+ TYD + P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 266 DLQMNWIDKRLSWNAGEWGCST-WL-VSSERXWRPDVVLVN 382
+ + W D L WN W+ +S+ R W PDV+ N
Sbjct: 77 EFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 197 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERXWRPDVV 373
VN+ L + H + E E T + + WID+ + W+A + + +S+ W+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 374 LVNA 385
L N+
Sbjct: 114 LYNS 117
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Frame = +2
Query: 137 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 298
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 299 SWNAGEWG-CSTWLVSSERXWRPDVVLVN 382
+WN ++G + V SE W+PD+++ N
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYN 115
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Frame = +2
Query: 137 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 298
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 299 SWNAGEWG-CSTWLVSSERXWRPDVVLVN 382
+WN ++G + V SE W+PD+++ N
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYN 115
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Frame = +2
Query: 137 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNWIDKRL 298
+I L Y +E P +S N+T+ L I+ E++ + + ++ W D+ L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 299 SWNAGEWG-CSTWLVSSERXWRPDVVLVN 382
+WN ++G + V SE W+PD+++ N
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLVYN 99
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +2
Query: 149 LLATYDRESPPD--SKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLSWNAG 313
LL Y+ E P SK +N+T I + + +IL ++++W+D +L W+
Sbjct: 7 LLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPR 66
Query: 314 EWGCSTWL-VSSERXWRPDVVLVN 382
+ T + + S++ W+PD++L N
Sbjct: 67 LYQNVTRIHIPSDKIWKPDIILYN 90
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 37.5 bits (83), Expect = 0.013
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Frame = +2
Query: 83 TCAIASAAECE-NATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVR 256
T ++ A CE N+ ++ LL YD+ P + V +++ L +I SE +
Sbjct: 20 TESLVDPAHCEYNSNHRKSILTDLLQDYDKTMVPSNNSV-QVSVELTVQDISSISEISSS 78
Query: 257 ILADLQMN--WIDKRLSWNAGEWGCSTWLVS--SERXWRPDVVLVNAXAT 394
+AD+ + W D RL + + L S SER W P+V VN+ +T
Sbjct: 79 FIADVWFSQVWYDPRLEYRNISCKTNLSLDSYVSERLWTPNVCFVNSKST 128
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 37.5 bits (83), Expect = 0.013
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 197 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERXWRPDVV 373
V + L++ H + E E T + L +W D+ L W ST ++S + W+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 374 LVNA 385
L N+
Sbjct: 114 LYNS 117
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Frame = +2
Query: 191 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL---VSSERXW 358
+VV++ ++L+ ++ E + ++A ++ W D +L W+ E+G + ++ W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 359 RPDVVLVNA 385
+PDV+L N+
Sbjct: 113 KPDVLLYNS 121
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 36.7 bits (81), Expect = 0.022
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +2
Query: 137 MIDSLLATYDRESPP--DSKIVVNLTLHL---RHANIRESESTVRILADLQMNWIDKRLS 301
++ L YD P D + VN+ L L + ++ E + ++ Q W D +L
Sbjct: 28 LLKDLREGYDPVERPVADHRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLR 87
Query: 302 WNAGEWGCSTWL-VSSERXWRPDVVLVNA 385
W+ E+G T L + W+PD++L N+
Sbjct: 88 WSPEEYGNITTLQIPHGTLWKPDILLFNS 116
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 203 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWRP 364
L +L+ ++E V ++ +L W D RLSWN + ST E+ W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 36.3 bits (80), Expect = 0.029
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 194 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRPDV 370
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V + W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 371 VLVNA 385
+ N+
Sbjct: 134 KVSNS 138
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 36.3 bits (80), Expect = 0.029
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 194 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRPDV 370
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ + V + W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 371 VLVNA 385
+ N+
Sbjct: 134 KVSNS 138
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 35.9 bits (79), Expect = 0.039
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 191 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRP 364
++V + L L N+ E + + L + W D ++ WN +G + VS ++ W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 365 DVVLVN 382
D+VL N
Sbjct: 116 DIVLFN 121
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 35.9 bits (79), Expect = 0.039
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 215 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWRPDVVLVNAXA 391
+R ++ E + L+M W D +L+W ++ G T + S+ W PD+VL N A
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 35.9 bits (79), Expect = 0.039
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 191 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRP 364
++V + L L N+ E + + L + W D ++ WN +G + VS ++ W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 365 DVVLVN 382
D+VL N
Sbjct: 116 DIVLFN 121
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 35.9 bits (79), Expect = 0.039
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 191 IVVNLTLHL-RHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRP 364
++V + L L N+ E + + L + W D ++ WN +G + VS ++ W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 365 DVVLVN 382
D+VL N
Sbjct: 116 DIVLFN 121
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 35.9 bits (79), Expect = 0.039
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 215 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWRPDVVLVNAXA 391
+R ++ E + L+M W D +L+W ++ G T + S+ W PD+VL N A
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAA 131
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 35.9 bits (79), Expect = 0.039
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTW-LVSSERXWRPDV 370
L+++W D+RL WN EW L S R W PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 35.9 bits (79), Expect = 0.039
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTW-LVSSERXWRPDV 370
L+++W D+RL WN EW L S R W PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 35.5 bits (78), Expect = 0.051
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 194 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWR 361
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ + W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 362 PDVVLVNAXATT 397
PD + N T
Sbjct: 120 PDGYIFNTVEET 131
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 35.5 bits (78), Expect = 0.051
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 194 VVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWR 361
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ + W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 362 PDVVLVNAXATT 397
PD + N T
Sbjct: 120 PDGYIFNTVEET 131
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 35.5 bits (78), Expect = 0.051
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 191 IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERXWRP 364
++V + L L+ ++ E V + A L+ +W+D L W ++G T L + W P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 365 DVVLVNA 385
DV++ N+
Sbjct: 111 DVLMYNS 117
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 35.1 bits (77), Expect = 0.068
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 143 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 319
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 320 GCSTWLVSSERXWRPDVVLVN 382
G T V ++ W PD+VL N
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFN 117
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 35.1 bits (77), Expect = 0.068
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 143 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 319
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 320 GCSTWLVSSERXWRPDVVLVN 382
G T V ++ W PD+VL N
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFN 117
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 34.7 bits (76), Expect = 0.090
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Frame = +2
Query: 107 ECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLH-LRHANIRESESTVRILADL 271
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 272 QMNWIDKRLSWNAGEWGCSTWLVSSER-XWRPDVVLVNAXAT 394
+ W D+ L WN ++ TWL E W PD + + T
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTVSTSIDT 121
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 34.7 bits (76), Expect = 0.090
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +2
Query: 209 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWRPDVVLVN 382
LH+ H + I++ + +++ W+D+RL WN + G T+ + WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWRKKFWTPT 121
Query: 383 AXATTXGXLRSPXPVY 430
T R P V+
Sbjct: 122 LMMTDVPNSRRPSDVF 137
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 33.5 bits (73), Expect = 0.21
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +2
Query: 113 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 286
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 287 DKRLSWNAGEWGCSTWLVSS-ERXWRP 364
D RL WN W + +V S W P
Sbjct: 93 DDRLMWNQDTWKKNKLVVHSFHHIWVP 119
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 188 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERXWRP 364
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ W P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 365 DVVLVNA 385
D L N+
Sbjct: 138 DTYLYNS 144
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 188 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERXWRP 364
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ W P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 365 DVVLVNA 385
D L N+
Sbjct: 138 DTYLYNS 144
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 188 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERXWRP 364
K+ ++++L+ + + E +++ + W D+ L WN E+G ++ ++ W P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 365 DVVLVNA 385
D L N+
Sbjct: 138 DTYLYNS 144
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWG-CSTWLVSSERXWRPDVVLVNA 385
L+M+W D L+W+ E+G + W+PDV+L N+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 161 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWL 337
YD ++P + L L+ + E V ++ ++ W D RLSWNA + T+
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFY 122
Query: 338 VSSERXWRP 364
W P
Sbjct: 123 TRQSNVWSP 131
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 33.1 bits (72), Expect = 0.27
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Frame = +2
Query: 107 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 280
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 281 -WIDKRLSWNAGEWGCSTWL---VSS--ERXWRPDVVLVNAXATT 397
W D RLS+ C+T + VS ++ W PD ++N+ +++
Sbjct: 68 IWQDPRLSFKHLN-VCATNITLKVSDFRKKIWTPDTCIINSKSSS 111
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWG-CSTWLVSSERXWRPDVVLVNA 385
L+M+W D L+W+ E+G + W+PDV+L N+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNS 116
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 197 VNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERXWRPDV 370
VNL++ L ++ E ++ + + +W D+ L WN ++G + +V + W PD
Sbjct: 133 VNLSMSLYQILDVDEHMQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDT 192
Query: 371 VLVNA 385
L N+
Sbjct: 193 YLYNS 197
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +2
Query: 137 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLS 301
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 302 WN-AGEWGCSTWLVSSERXWRPDVVLVNAXAT 394
WN A G + ++ W P + + N+ T
Sbjct: 104 WNPADHSGLTQVVMPRSLVWVPKLFIYNSMDT 135
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 32.3 bits (70), Expect = 0.48
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Frame = +2
Query: 53 LYYSCYRFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSKIVVNLTLH-LRHA 226
L S FL+ S + + L+ + TYD P D+ V +T +
Sbjct: 4 LLNSLLTFLVLRTFGSNTTNVESNTEVLLQELFNRTYDVNVKPSDTLTTVTITPNTFLLL 63
Query: 227 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCS-TWL-VSSERXWRPDVV 373
++ +++ T+ + + W D L WN + + W+ +S R W PDV+
Sbjct: 64 SMDQTQETILFSQEFLLKWYDPILHWNRTLFDYNREWIKISVSRVWVPDVI 114
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 31.9 bits (69), Expect = 0.63
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 161 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL- 337
Y+ +P V+L +L+ + E E V ++ ++ W D R++W++ +G L
Sbjct: 64 YNPLAPKRFNYTVSL-YYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYGDIKMLH 122
Query: 338 VSSERXWRPDVVL 376
+ ++ W P + L
Sbjct: 123 MRQDKVWSPTLSL 135
>AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine
receptor (62.5 kD)(acr-23) protein.
Length = 545
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 185 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS-SERXW 358
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 359 RPDVVLVNA 385
PD L N+
Sbjct: 110 LPDTTLYNS 118
>AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine
receptor protein 23 protein.
Length = 545
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 185 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVS-SERXW 358
S I V L+L L + E + + + A W+D+ L W+ E+ T +++ + W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 359 RPDVVLVNA 385
PD L N+
Sbjct: 110 LPDTTLYNS 118
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +2
Query: 230 IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERXWRPDVVLVNAXATT 397
+ E +++L +W D L W+ EW G + W PD + N T
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFNTVEET 124
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 179 PDSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 349
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 350 RXWRPDVVLVN 382
+ W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 179 PDSKIVVNLTLHLRHANIRESE-STVRILADLQMNWIDKRLSWNAGEWG--CSTWLVSSE 349
P + V + + ++ + +++ + + A L+ W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 350 RXWRPDVVLVN 382
+ W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 269 LQMNWIDKRLSWNAGEWGCSTWLVSSERXWRPDVVLVNA 385
L M W D+RL+ N T + ++R W PD+ VN+
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVNS 213
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWNAGEWG------CSTWLVSSERXWRPDVVLVNA 385
++ E + ILA + +W D +L+W+ +G S +S + WRPDV+L N+
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNS 117
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 230 IRESESTVRILADLQMNWIDKRLSWN-AGEWGC--STWLVSSERXWRPDVV 373
++ S + D+ +NW D+R+ W+ GE+ ++ +S W P V+
Sbjct: 83 VKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLYIFNSSAIWTPHVI 133
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 251 VRILADLQMNWIDKRLSWNAGEWGCST---WLVSSERXWRPDVVLVNA 385
+ + A L+ W+D RL W+ ++ T + + WRPD++L N+
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNS 59
>U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical
protein C44B7.4 protein.
Length = 329
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 44 VDDLYYSCYRFLLTCAIASAAECENATSLS 133
+D YY CYR C I+ A C+N+T L+
Sbjct: 124 LDGGYYRCYRSHEFCLISDAILCKNSTILN 153
>Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical
protein R06A4.10b protein.
Length = 511
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 185 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-XW 358
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 359 RPDVVLVNA 385
PD L N+
Sbjct: 65 LPDTTLYNS 73
>Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical
protein R06A4.10a protein.
Length = 514
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 185 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-XW 358
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ W
Sbjct: 5 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 64
Query: 359 RPDVVLVNA 385
PD L N+
Sbjct: 65 LPDTTLYNS 73
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +2
Query: 203 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 319
L L+ + E + V ++ ++ W D RL+WN ++
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDY 116
>AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine
receptor 20 (63.9kD) alternative variant a protein.
Length = 553
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 185 SKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER-XW 358
S I V+ ++ L ++ E + + + A + W D+ L W+ ++G T ++ W
Sbjct: 47 SPIEVHFSMELYQIISVNEPQQFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIW 106
Query: 359 RPDVVLVNA 385
PD L N+
Sbjct: 107 LPDTTLYNS 115
>Z49912-7|CAI70412.1| 554|Caenorhabditis elegans Hypothetical
protein T24F1.3b protein.
Length = 554
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 379 YQYHVRPPXAFRGHQPSAAAPFPCVPTQSFVDPIHLK 269
Y+YH+ RGH AA P V T F+D L+
Sbjct: 473 YRYHLDAELRQRGHSVPDAAAQPMVQTNPFLDEEFLR 509
>Z49912-6|CAA90137.1| 615|Caenorhabditis elegans Hypothetical
protein T24F1.3a protein.
Length = 615
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 379 YQYHVRPPXAFRGHQPSAAAPFPCVPTQSFVDPIHLK 269
Y+YH+ RGH AA P V T F+D L+
Sbjct: 534 YRYHLDAELRQRGHSVPDAAAQPMVQTNPFLDEEFLR 570
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,575,420
Number of Sequences: 27780
Number of extensions: 223811
Number of successful extensions: 699
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -