Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_P11
(996 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 37 0.038
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 34 0.27
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 34 0.27
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 34 0.27
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 33 0.46
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 33 0.46
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 33 0.46
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 33 0.46
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 33 0.46
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 33 0.46
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 31 1.9
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 31 1.9
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 31 1.9
AY089606-1|AAL90344.1| 206|Drosophila melanogaster RE21686p pro... 31 1.9
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 31 1.9
AE013599-3386|AAF46839.2| 503|Drosophila melanogaster CG13506-P... 31 1.9
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 31 2.5
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 31 2.5
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 31 2.5
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 31 2.5
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 31 2.5
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 30 4.3
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 30 5.7
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 30 5.7
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 30 5.7
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 30 5.7
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 29 7.5
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 37.1 bits (82), Expect = 0.038
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
++ +W D +L W E+G H+ P + RPD VL N A
Sbjct: 93 VEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYNNA 133
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
++ +W D +L W E+G + P + RPD VL N A
Sbjct: 59 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 99
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
++ +W D +L W E+G + P + RPD VL N A
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 118
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 34.3 bits (75), Expect = 0.27
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
++ +W D +L W E+G + P + RPD VL N A
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 118
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 33.5 bits (73), Expect = 0.46
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
L++ W D L WN+ E+G P RL +PD ++ N A
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSA 153
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 33.5 bits (73), Expect = 0.46
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
L++ W D L WN+ E+G P RL +PD ++ N A
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSA 153
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 33.5 bits (73), Expect = 0.46
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
L++ W D L WN+ E+G P RL +PD ++ N A
Sbjct: 91 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSA 131
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 33.5 bits (73), Expect = 0.46
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
L++ W D L WN+ E+G P RL +PD ++ N A
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSA 153
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 33.5 bits (73), Expect = 0.46
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
L++ W D L WN+ E+G P RL +PD ++ N A
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSA 153
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 33.5 bits (73), Expect = 0.46
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
L++ W D L WN+ E+G P RL +PD ++ N A
Sbjct: 94 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSA 134
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 31.5 bits (68), Expect = 1.9
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 212 NIRESESSGRILADLQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
N+ E + L++ W D +L W+ ++G + P ++ +PD VL N A
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA 120
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 31.5 bits (68), Expect = 1.9
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 212 NIRESESSGRILADLQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
N+ E + L++ W D +L W+ ++G + P ++ +PD VL N A
Sbjct: 66 NVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA 120
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 31.5 bits (68), Expect = 1.9
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 212 NIRESESSGRILADLQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
N+ E + L++ W D +L W+ ++G + P ++ +PD VL N A
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA 120
>AY089606-1|AAL90344.1| 206|Drosophila melanogaster RE21686p
protein.
Length = 206
Score = 31.5 bits (68), Expect = 1.9
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -1
Query: 246 SIRPEDSDSRMLACLKCRVRLTTILEXGGRLPIVRCEER 130
++ PEDSD L RVR T L G RL I+ C++R
Sbjct: 134 NVSPEDSDDYYCEILPQRVRQHTALRVGARLSIL-CDDR 171
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 31.5 bits (68), Expect = 1.9
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 212 NIRESESSGRILADLQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
N+ E + L++ W D +L W+ ++G + P ++ +PD VL N A
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA 120
>AE013599-3386|AAF46839.2| 503|Drosophila melanogaster CG13506-PA
protein.
Length = 503
Score = 31.5 bits (68), Expect = 1.9
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -1
Query: 246 SIRPEDSDSRMLACLKCRVRLTTILEXGGRLPIVRCEER 130
++ PEDSD L RVR T L G RL I+ C++R
Sbjct: 134 NVSPEDSDDYYCEILPQRVRQHTALRVGARLSIL-CDDR 171
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 31.1 bits (67), Expect = 2.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
L++ W D L WN ++G P R+ +PD ++ N A
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSA 405
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 31.1 bits (67), Expect = 2.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
L++ W D L WN ++G P R+ +PD ++ N A
Sbjct: 364 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSA 404
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 31.1 bits (67), Expect = 2.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
L++ W D L WN ++G P R+ +PD ++ N A
Sbjct: 316 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSA 356
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 31.1 bits (67), Expect = 2.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
L++ W D L WN ++G P R+ +PD ++ N A
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSA 405
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 31.1 bits (67), Expect = 2.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
L++ W D L WN ++G P R+ +PD ++ N A
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSA 405
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
++ W D +L WN ++G P + PD VL N A
Sbjct: 77 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWHPDIVLYNNA 117
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLN 370
++ W D +L W+ E+G + P + PD VL N
Sbjct: 63 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 101
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLN 370
++ W D +L W+ E+G + P + PD VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLN 370
++ W D +L W+ E+G + P + PD VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLN 370
++ W D +L W+ E+G + P + PD VL N
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAWEWGCSHLAWCPRXRLXRPDXVLLNPA 376
++ W D +L WN ++G P + PD VL N A
Sbjct: 77 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,429,654
Number of Sequences: 53049
Number of extensions: 453548
Number of successful extensions: 937
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5037883938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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