Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_P09
(886 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052973-1|AAH52973.1| 1187|Homo sapiens PCDH12 protein protein. 34 0.60
BC042634-1|AAH42634.1| 1187|Homo sapiens PCDH12 protein protein. 34 0.60
AY358428-1|AAQ88794.1| 1184|Homo sapiens PCDH12 protein. 34 0.60
AK024140-1|BAB14837.1| 1187|Homo sapiens protein ( Homo sapiens ... 34 0.60
AK023785-1|BAB14677.1| 808|Homo sapiens protein ( Homo sapiens ... 34 0.60
AF240635-1|AAF73962.1| 1184|Homo sapiens vascular endothelial ca... 34 0.60
AF231025-1|AAF61931.1| 1184|Homo sapiens protocadherin 12 protein. 34 0.60
AB026893-1|BAA95162.1| 1184|Homo sapiens vascular cadherin-2 pro... 34 0.60
AB029041-1|BAA83070.1| 1165|Homo sapiens KIAA1118 protein protein. 31 4.2
X70940-1|CAA50280.1| 463|Homo sapiens elongation factor 1 alpha... 31 5.6
L10340-1|AAA91835.1| 435|Homo sapiens elongation factor-1 alpha... 31 5.6
BC110409-1|AAI10410.1| 463|Homo sapiens eukaryotic translation ... 31 5.6
BC000432-1|AAH00432.1| 463|Homo sapiens eukaryotic translation ... 31 5.6
AL121829-9|CAC15522.1| 463|Homo sapiens EEF1A2 protein. 31 5.6
AF163763-1|AAF80488.1| 463|Homo sapiens elongation factor 1 A-2... 31 5.6
AB209064-1|BAD92301.1| 340|Homo sapiens eukaryotic translation ... 31 5.6
AF425597-1|AAL23950.1| 218|Homo sapiens forkhead/winged helix t... 31 7.3
>BC052973-1|AAH52973.1| 1187|Homo sapiens PCDH12 protein protein.
Length = 1187
Score = 34.3 bits (75), Expect = 0.60
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 384 PEDMTPT-SPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTPPDDNEDERPPLPTAAR 560
PE + P S A L + + A+ L +P E P G +G TPP RP L T
Sbjct: 563 PEVVQPVLSDGKASLSVLVNASTGHLLVPIETPNGLGPAGTDTPPLATHSSRPFLLTTIV 622
Query: 561 SXESLDSG 584
+ ++ DSG
Sbjct: 623 ARDA-DSG 629
>BC042634-1|AAH42634.1| 1187|Homo sapiens PCDH12 protein protein.
Length = 1187
Score = 34.3 bits (75), Expect = 0.60
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 384 PEDMTPT-SPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTPPDDNEDERPPLPTAAR 560
PE + P S A L + + A+ L +P E P G +G TPP RP L T
Sbjct: 563 PEVVQPVLSDGKASLSVLVNASTGHLLVPIETPNGLGPAGTDTPPLATHSSRPFLLTTIV 622
Query: 561 SXESLDSG 584
+ ++ DSG
Sbjct: 623 ARDA-DSG 629
>AY358428-1|AAQ88794.1| 1184|Homo sapiens PCDH12 protein.
Length = 1184
Score = 34.3 bits (75), Expect = 0.60
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 384 PEDMTPT-SPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTPPDDNEDERPPLPTAAR 560
PE + P S A L + + A+ L +P E P G +G TPP RP L T
Sbjct: 563 PEVVQPVLSDGKASLSVLVNASTGHLLVPIETPNGLGPAGTDTPPLATHSSRPFLLTTIV 622
Query: 561 SXESLDSG 584
+ ++ DSG
Sbjct: 623 ARDA-DSG 629
>AK024140-1|BAB14837.1| 1187|Homo sapiens protein ( Homo sapiens
cDNA FLJ14078 fis, clone HEMBB1002044, moderately
similar to Mus musculus mRNA for vascular cadherin-2. ).
Length = 1187
Score = 34.3 bits (75), Expect = 0.60
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 384 PEDMTPT-SPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTPPDDNEDERPPLPTAAR 560
PE + P S A L + + A+ L +P E P G +G TPP RP L T
Sbjct: 563 PEVVQPVLSDGKASLSVLVNASTGHLLVPIETPNGLGPAGTDTPPLATHSSRPFLLTTIV 622
Query: 561 SXESLDSG 584
+ ++ DSG
Sbjct: 623 ARDA-DSG 629
>AK023785-1|BAB14677.1| 808|Homo sapiens protein ( Homo sapiens
cDNA FLJ13723 fis, clone PLACE2000458, weakly similar to
CADHERIN-RELATED TUMOR SUPPRESSOR PRECURSOR. ).
Length = 808
Score = 34.3 bits (75), Expect = 0.60
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 384 PEDMTPT-SPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTPPDDNEDERPPLPTAAR 560
PE + P S A L + + A+ L +P E P G +G TPP RP L T
Sbjct: 187 PEVVQPVLSDGKASLSVLVNASTGHLLVPIETPNGLGPAGTDTPPLATHSSRPFLLTTIV 246
Query: 561 SXESLDSG 584
+ ++ DSG
Sbjct: 247 ARDA-DSG 253
>AF240635-1|AAF73962.1| 1184|Homo sapiens vascular endothelial
cadherin 2 protein.
Length = 1184
Score = 34.3 bits (75), Expect = 0.60
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 384 PEDMTPT-SPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTPPDDNEDERPPLPTAAR 560
PE + P S A L + + A+ L +P E P G +G TPP RP L T
Sbjct: 563 PEVVQPVLSDGKASLSVLVNASTGHLLVPIETPNGLGPAGTDTPPLATHSSRPFLLTTIV 622
Query: 561 SXESLDSG 584
+ ++ DSG
Sbjct: 623 ARDA-DSG 629
>AF231025-1|AAF61931.1| 1184|Homo sapiens protocadherin 12 protein.
Length = 1184
Score = 34.3 bits (75), Expect = 0.60
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 384 PEDMTPT-SPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTPPDDNEDERPPLPTAAR 560
PE + P S A L + + A+ L +P E P G +G TPP RP L T
Sbjct: 563 PEVVQPVLSDGKASLSVLVNASTGHLLVPIETPNGLGPAGTDTPPLATHSSRPFLLTTIV 622
Query: 561 SXESLDSG 584
+ ++ DSG
Sbjct: 623 ARDA-DSG 629
>AB026893-1|BAA95162.1| 1184|Homo sapiens vascular cadherin-2
protein.
Length = 1184
Score = 34.3 bits (75), Expect = 0.60
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 384 PEDMTPT-SPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTPPDDNEDERPPLPTAAR 560
PE + P S A L + + A+ L +P E P G +G TPP RP L T
Sbjct: 563 PEVVQPVLSDGKASLSVLVNASTGHLLVPIETPNGLGPAGTDTPPLATHSSRPFLLTTIV 622
Query: 561 SXESLDSG 584
+ ++ DSG
Sbjct: 623 ARDA-DSG 629
>AB029041-1|BAA83070.1| 1165|Homo sapiens KIAA1118 protein protein.
Length = 1165
Score = 31.5 bits (68), Expect = 4.2
Identities = 26/91 (28%), Positives = 36/91 (39%)
Frame = +3
Query: 309 TGAGGPPAGCGHQRNRSLDSVLQRIPEDMTPTSPEDAPLRLTIEATVPRLALPPEVPTGS 488
TG GG A +R+ S V Q PT P D + E + P + T
Sbjct: 144 TGPGGSQAINNLRRSNSTTQVSQPRSGSPRPTEPTD--FLMLFEGSPSGKKRPASLSTAP 201
Query: 489 DDSGIHTPPDDNEDERPPLPTAARSXESLDS 581
+ G D++ LP+ ARS +LDS
Sbjct: 202 SEKGATWNVLDDQPRGFTLPSNARSSSALDS 232
>X70940-1|CAA50280.1| 463|Homo sapiens elongation factor 1 alpha-2
protein.
Length = 463
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 351 NRSLDSVLQRIPEDMTPTSPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTP 512
N S S+L+ + + PT P D PLRL ++ V ++ VP G ++GI P
Sbjct: 222 NASGVSLLEALDTILPPTRPTDKPLRLPLQ-DVYKIGGIGTVPVGRVETGILRP 274
>L10340-1|AAA91835.1| 435|Homo sapiens elongation factor-1 alpha
protein.
Length = 435
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 351 NRSLDSVLQRIPEDMTPTSPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTP 512
N S S+L+ + + PT P D PLRL ++ V ++ VP G ++GI P
Sbjct: 194 NASGVSLLEALDTILPPTRPTDKPLRLPLQ-DVYKIGGIGTVPVGRVETGILRP 246
>BC110409-1|AAI10410.1| 463|Homo sapiens eukaryotic translation
elongation factor 1 alpha 2 protein.
Length = 463
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 351 NRSLDSVLQRIPEDMTPTSPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTP 512
N S S+L+ + + PT P D PLRL ++ V ++ VP G ++GI P
Sbjct: 222 NASGVSLLEALDTILPPTRPTDKPLRLPLQ-DVYKIGGIGTVPVGRVETGILRP 274
>BC000432-1|AAH00432.1| 463|Homo sapiens eukaryotic translation
elongation factor 1 alpha 2 protein.
Length = 463
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 351 NRSLDSVLQRIPEDMTPTSPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTP 512
N S S+L+ + + PT P D PLRL ++ V ++ VP G ++GI P
Sbjct: 222 NASGVSLLEALDTILPPTRPTDKPLRLPLQ-DVYKIGGIGTVPVGRVETGILRP 274
>AL121829-9|CAC15522.1| 463|Homo sapiens EEF1A2 protein.
Length = 463
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 351 NRSLDSVLQRIPEDMTPTSPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTP 512
N S S+L+ + + PT P D PLRL ++ V ++ VP G ++GI P
Sbjct: 222 NASGVSLLEALDTILPPTRPTDKPLRLPLQ-DVYKIGGIGTVPVGRVETGILRP 274
>AF163763-1|AAF80488.1| 463|Homo sapiens elongation factor 1 A-2
protein.
Length = 463
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 351 NRSLDSVLQRIPEDMTPTSPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTP 512
N S S+L+ + + PT P D PLRL ++ V ++ VP G ++GI P
Sbjct: 222 NASGVSLLEALDTILPPTRPTDKPLRLPLQ-DVYKIGGIGTVPVGRVETGILRP 274
>AB209064-1|BAD92301.1| 340|Homo sapiens eukaryotic translation
elongation factor 1 alpha 2 variant protein.
Length = 340
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 351 NRSLDSVLQRIPEDMTPTSPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTP 512
N S S+L+ + + PT P D PLRL ++ V ++ VP G ++GI P
Sbjct: 198 NASGVSLLEALDTILPPTRPTDKPLRLPLQ-DVYKIGGIGTVPVGRVETGILRP 250
>AF425597-1|AAL23950.1| 218|Homo sapiens forkhead/winged helix
transcription factor FOXN4 protein.
Length = 218
Score = 30.7 bits (66), Expect = 7.3
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 363 DSVLQRIPEDMTPTSPEDAPLRLTIEATVPRLALPPEVPTGSDDSGIHTPPDDNEDERP 539
DS + + P P+S P L AT P+ LPP SD G P++ +D +P
Sbjct: 78 DSQMSQFPVGGQPSSGLQDPPHLYSPATQPQFPLPPGAQQLSDRHG----PEEQQDRQP 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,938,188
Number of Sequences: 237096
Number of extensions: 2649195
Number of successful extensions: 8839
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8824
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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