Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_P05
(969 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 27 0.26
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 27 0.26
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 25 0.78
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 1.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 2.4
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 24 2.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 4.2
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 23 4.2
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 23 4.2
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 23 4.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 9.6
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.1 bits (57), Expect = 0.26
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Frame = +1
Query: 82 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIXE 240
++C +A + + D LL+ Y+R P ++ V + L L N+
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 241 SESTVRILADLQMNWIDXRLSXNPXEWG 324
T + ++ W D +L NP ++G
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYG 90
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 27.1 bits (57), Expect = 0.26
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +1
Query: 139 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIXESESTVRILAD---LQMNWIDXRLS 303
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 304 XNPXEWG 324
NP E+G
Sbjct: 97 WNPEEYG 103
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 25.4 bits (53), Expect = 0.78
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +1
Query: 112 CENATSLSLMIDSLLATYDRESPPDSKIVVNLT--LHLRHANIXESESTVRILAD---LQ 276
C + D LL+ Y++ P + LT + L+ + + + +I+ ++
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVE 78
Query: 277 MNWIDXRLSXNPXEWG 324
+W D +L +P E+G
Sbjct: 79 QSWYDYKLKWDPKEYG 94
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 1.0
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 58 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 162
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.8
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +1
Query: 139 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIXESESTVRILADLQMNWIDXRLS 303
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 304 XNPXEWG 324
N E+G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.8
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +1
Query: 139 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIXESESTVRILADLQMNWIDXRLS 303
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 304 XNPXEWG 324
N E+G
Sbjct: 118 WNESEYG 124
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.2 bits (50), Expect = 1.8
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 139 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIXESESTVRILAD---LQMNWIDXRLS 303
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 XNPXEWG 324
P E+G
Sbjct: 92 WEPKEYG 98
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.2 bits (50), Expect = 1.8
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 139 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIXESESTVRILAD---LQMNWIDXRLS 303
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 XNPXEWG 324
P E+G
Sbjct: 92 WEPKEYG 98
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +1
Query: 229 NIXESESTVRILADLQMNWIDXRLSXNPXEWG 324
++ E + A L++ W+D L N E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +1
Query: 229 NIXESESTVRILADLQMNWIDXRLSXNPXEWG 324
++ E + A L++ W+D L N E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +1
Query: 229 NIXESESTVRILADLQMNWIDXRLSXNPXEWG 324
++ E + A L++ W+D L N E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +1
Query: 229 NIXESESTVRILADLQMNWIDXRLSXNPXEWG 324
++ E + A L++ W+D L N E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +1
Query: 229 NIXESESTVRILADLQMNWIDXRLSXNPXEWG 324
++ E + A L++ W+D L N E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.8 bits (49), Expect = 2.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +1
Query: 229 NIXESESTVRILADLQMNWIDXRLSXNPXEWG 324
++ E + A L++ W+D L N E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 23.8 bits (49), Expect = 2.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 403 GXDGSRXDQYHVRSPQAFRGHQHKXCS 323
G S D+Y+ R+P F+G + K S
Sbjct: 98 GKKASFDDEYYKRAPMGFQGMRGKKIS 124
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 4.2
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIXESESTVRILADLQMNW 285
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 286 IDXRLS 303
D RL+
Sbjct: 68 TDPRLA 73
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 23.0 bits (47), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 403 GXDGSRXDQYHVRSPQAFRGHQHK 332
G S D+Y+ R+P F+G + K
Sbjct: 97 GKKASFDDEYYKRAPMGFQGMRGK 120
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 23.0 bits (47), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 403 GXDGSRXDQYHVRSPQAFRGHQHK 332
G S D+Y+ R+P F+G + K
Sbjct: 97 GKKASFDDEYYKRAPMGFQGMRGK 120
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 23.0 bits (47), Expect = 4.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 403 GXDGSRXDQYHVRSPQAFRGHQHK 332
G S D+Y+ R+P F+G + K
Sbjct: 97 GKKASFDDEYYKRAPMGFQGMRGK 120
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 9.6
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIXESESTVRILADLQMNW 285
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 286 IDXRLS 303
D RL+
Sbjct: 68 TDPRLA 73
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,409
Number of Sequences: 438
Number of extensions: 2671
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31927896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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