Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_P01
(840 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 164 2e-40
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 164 2e-40
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 164 2e-40
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 164 2e-40
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 128 7e-30
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 2.6
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 2.6
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 2.6
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 164 bits (398), Expect = 2e-40
Identities = 84/167 (50%), Positives = 103/167 (61%)
Frame = +1
Query: 94 MSLSVARPLXVGVFREE*DGAGXQXXXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSK 273
MSL ARPL V V+ E+ + A + D+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
Query: 274 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXX 453
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 60 LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119
Query: 454 XXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLGCSRQSPRDQQ 594
Q++GH+I+ + E PL S + + Q+
Sbjct: 120 VNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQK 166
Score = 118 bits (285), Expect = 8e-27
Identities = 52/76 (68%), Positives = 67/76 (88%)
Frame = +2
Query: 554 FPWVVADKVQEINKTKQAVIFLRRLKAWSDILKVYRSQRLRAGKGKMRNRRRIQRKGXLI 733
FP VV+D+VQ++ KTKQAVIFLRRLK W+DI KVY+SQR RAG+G MR+RRRI R+G L+
Sbjct: 153 FPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLV 212
Query: 734 IFNKDQGLTRAFRNIP 781
+++KD+GL +AFRNIP
Sbjct: 213 VYDKDEGLRKAFRNIP 228
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 164 bits (398), Expect = 2e-40
Identities = 84/167 (50%), Positives = 103/167 (61%)
Frame = +1
Query: 94 MSLSVARPLXVGVFREE*DGAGXQXXXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSK 273
MSL ARPL V V+ E+ + A + D+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
Query: 274 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXX 453
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 60 LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119
Query: 454 XXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLGCSRQSPRDQQ 594
Q++GH+I+ + E PL S + + Q+
Sbjct: 120 VNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQK 166
Score = 120 bits (288), Expect = 3e-27
Identities = 52/77 (67%), Positives = 68/77 (88%)
Frame = +2
Query: 554 FPWVVADKVQEINKTKQAVIFLRRLKAWSDILKVYRSQRLRAGKGKMRNRRRIQRKGXLI 733
FP VV+D+VQ++ KTKQAVIFLRRLK W+DI KVY+SQR RAG+G MR+RRRI R+G L+
Sbjct: 153 FPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLV 212
Query: 734 IFNKDQGLTRAFRNIPV 784
+++KD+GL +AFRNIP+
Sbjct: 213 VYDKDEGLRKAFRNIPI 229
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 164 bits (398), Expect = 2e-40
Identities = 84/167 (50%), Positives = 103/167 (61%)
Frame = +1
Query: 94 MSLSVARPLXVGVFREE*DGAGXQXXXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSK 273
MSL ARPL V V+ E+ + A + D+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
Query: 274 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXX 453
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 60 LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119
Query: 454 XXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLGCSRQSPRDQQ 594
Q++GH+I+ + E PL S + + Q+
Sbjct: 120 VNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQK 166
Score = 118 bits (285), Expect = 8e-27
Identities = 52/76 (68%), Positives = 67/76 (88%)
Frame = +2
Query: 554 FPWVVADKVQEINKTKQAVIFLRRLKAWSDILKVYRSQRLRAGKGKMRNRRRIQRKGXLI 733
FP VV+D+VQ++ KTKQAVIFLRRLK W+DI KVY+SQR RAG+G MR+RRRI R+G L+
Sbjct: 153 FPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLV 212
Query: 734 IFNKDQGLTRAFRNIP 781
+++KD+GL +AFRNIP
Sbjct: 213 VYDKDEGLRKAFRNIP 228
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 164 bits (398), Expect = 2e-40
Identities = 84/167 (50%), Positives = 103/167 (61%)
Frame = +1
Query: 94 MSLSVARPLXVGVFREE*DGAGXQXXXXXXXXXXXXXXDLVNDVHVSMSKNSRQPYCVSK 273
MSL ARPL V V+ E+ + A + D+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPL-VSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
Query: 274 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXX 453
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 60 LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119
Query: 454 XXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLGCSRQSPRDQQ 594
Q++GH+I+ + E PL S + + Q+
Sbjct: 120 VNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQK 166
Score = 118 bits (285), Expect = 8e-27
Identities = 52/76 (68%), Positives = 67/76 (88%)
Frame = +2
Query: 554 FPWVVADKVQEINKTKQAVIFLRRLKAWSDILKVYRSQRLRAGKGKMRNRRRIQRKGXLI 733
FP VV+D+VQ++ KTKQAVIFLRRLK W+DI KVY+SQR RAG+G MR+RRRI R+G L+
Sbjct: 153 FPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLV 212
Query: 734 IFNKDQGLTRAFRNIP 781
+++KD+GL +AFRNIP
Sbjct: 213 VYDKDEGLRKAFRNIP 228
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 128 bits (310), Expect = 7e-30
Identities = 60/104 (57%), Positives = 69/104 (66%)
Frame = +1
Query: 283 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 462
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 463 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLGCSRQSPRDQQ 594
Q++GH+I+ + E PL S + + Q+
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQK 104
Score = 54.4 bits (125), Expect = 2e-07
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = +2
Query: 554 FPWVVADKVQEINKTKQAVIFLRRLKAWSDILK 652
FP VV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 91 FPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.6
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 315 TCCRP-NSACPWWWYS*VRSGC 377
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 2.6
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 315 TCCRP-NSACPWWWYS*VRSGC 377
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.6
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 315 TCCRP-NSACPWWWYS*VRSGC 377
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,477,946
Number of Sequences: 53049
Number of extensions: 811161
Number of successful extensions: 4159
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4017
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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