Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_M18
         (979 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC054516-1|AAH54516.1|  666|Homo sapiens amyloid beta (A4) precu...    33   1.2  
AY152730-1|AAN75525.1|  665|Homo sapiens Rap1-interacting adapto...    33   1.2  
AL160287-2|CAH70339.1|  666|Homo sapiens amyloid beta (A4) precu...    33   1.2  
AB085852-1|BAC41256.1|  666|Homo sapiens proline-rich protein 73...    33   1.2  
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.             31   8.5  
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.             31   8.5  
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.             31   8.5  
L18987-1|AAA35498.1|  663|Homo sapiens alpha-2 type XI collagen ...    31   8.5  
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph...    31   8.5  
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph...    31   8.5  
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph...    31   8.5  
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp...    31   8.5  
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ...    31   8.5  
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha...    31   8.5  
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha...    31   8.5  

>BC054516-1|AAH54516.1|  666|Homo sapiens amyloid beta (A4)
           precursor protein-binding, family B, member 1
           interacting pro protein.
          Length = 666

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 19/65 (29%), Positives = 21/65 (32%)
 Frame = +1

Query: 592 PPPPXKXXKFSXAXXXXXXXXKKXXXGGGAXFXXXKKXPPPPPXXXFXXPXKKNPPXXSX 771
           PPPP        +         K   GGG         PPPPP      P +  PP    
Sbjct: 517 PPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDP-ELPPPPPDF 575

Query: 772 XXPPP 786
             PPP
Sbjct: 576 MEPPP 580


>AY152730-1|AAN75525.1|  665|Homo sapiens Rap1-interacting adaptor
           molecule protein.
          Length = 665

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 19/65 (29%), Positives = 21/65 (32%)
 Frame = +1

Query: 592 PPPPXKXXKFSXAXXXXXXXXKKXXXGGGAXFXXXKKXPPPPPXXXFXXPXKKNPPXXSX 771
           PPPP        +         K   GGG         PPPPP      P +  PP    
Sbjct: 517 PPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDP-ELPPPPPDF 575

Query: 772 XXPPP 786
             PPP
Sbjct: 576 MEPPP 580


>AL160287-2|CAH70339.1|  666|Homo sapiens amyloid beta (A4)
           precursor protein-binding, family B, member 1
           interacting pro protein.
          Length = 666

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 19/65 (29%), Positives = 21/65 (32%)
 Frame = +1

Query: 592 PPPPXKXXKFSXAXXXXXXXXKKXXXGGGAXFXXXKKXPPPPPXXXFXXPXKKNPPXXSX 771
           PPPP        +         K   GGG         PPPPP      P +  PP    
Sbjct: 517 PPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDP-ELPPPPPDF 575

Query: 772 XXPPP 786
             PPP
Sbjct: 576 MEPPP 580


>AB085852-1|BAC41256.1|  666|Homo sapiens proline-rich protein 73
           protein.
          Length = 666

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 19/65 (29%), Positives = 21/65 (32%)
 Frame = +1

Query: 592 PPPPXKXXKFSXAXXXXXXXXKKXXXGGGAXFXXXKKXPPPPPXXXFXXPXKKNPPXXSX 771
           PPPP        +         K   GGG         PPPPP      P +  PP    
Sbjct: 517 PPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDP-ELPPPPPDF 575

Query: 772 XXPPP 786
             PPP
Sbjct: 576 MEPPP 580


>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
          Length = 1629

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -1

Query: 217 PKGFXXPXGXXXXPGLSSXXGVLGXKGK--AIGPXEGKWP--KPXXNGLKGT 74
           PKG   P G    PG     G  G  G   AIGP   K P  KP   G+ G+
Sbjct: 528 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGS 579


>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
          Length = 1650

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -1

Query: 217 PKGFXXPXGXXXXPGLSSXXGVLGXKGK--AIGPXEGKWP--KPXXNGLKGT 74
           PKG   P G    PG     G  G  G   AIGP   K P  KP   G+ G+
Sbjct: 549 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGS 600


>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
          Length = 1736

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -1

Query: 217 PKGFXXPXGXXXXPGLSSXXGVLGXKGK--AIGPXEGKWP--KPXXNGLKGT 74
           PKG   P G    PG     G  G  G   AIGP   K P  KP   G+ G+
Sbjct: 635 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGS 686


>L18987-1|AAA35498.1|  663|Homo sapiens alpha-2 type XI collagen
           protein.
          Length = 663

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -1

Query: 217 PKGFXXPXGXXXXPGLSSXXGVLGXKGK--AIGPXEGKWP--KPXXNGLKGT 74
           PKG   P G    PG     G  G  G   AIGP   K P  KP   G+ G+
Sbjct: 491 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGS 542


>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
           protein.
          Length = 1622

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -1

Query: 217 PKGFXXPXGXXXXPGLSSXXGVLGXKGK--AIGPXEGKWP--KPXXNGLKGT 74
           PKG   P G    PG     G  G  G   AIGP   K P  KP   G+ G+
Sbjct: 521 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGS 572


>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
           protein.
          Length = 1650

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -1

Query: 217 PKGFXXPXGXXXXPGLSSXXGVLGXKGK--AIGPXEGKWP--KPXXNGLKGT 74
           PKG   P G    PG     G  G  G   AIGP   K P  KP   G+ G+
Sbjct: 549 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGS 600


>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
           protein.
          Length = 1650

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -1

Query: 217 PKGFXXPXGXXXXPGLSSXXGVLGXKGK--AIGPXEGKWP--KPXXNGLKGT 74
           PKG   P G    PG     G  G  G   AIGP   K P  KP   G+ G+
Sbjct: 549 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGS 600


>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha
           2 protein.
          Length = 1650

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -1

Query: 217 PKGFXXPXGXXXXPGLSSXXGVLGXKGK--AIGPXEGKWP--KPXXNGLKGT 74
           PKG   P G    PG     G  G  G   AIGP   K P  KP   G+ G+
Sbjct: 549 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGS 600


>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
           protein.
          Length = 1650

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -1

Query: 217 PKGFXXPXGXXXXPGLSSXXGVLGXKGK--AIGPXEGKWP--KPXXNGLKGT 74
           PKG   P G    PG     G  G  G   AIGP   K P  KP   G+ G+
Sbjct: 549 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGS 600


>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
           protein.
          Length = 1736

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -1

Query: 217 PKGFXXPXGXXXXPGLSSXXGVLGXKGK--AIGPXEGKWP--KPXXNGLKGT 74
           PKG   P G    PG     G  G  G   AIGP   K P  KP   G+ G+
Sbjct: 635 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGS 686


>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
           protein.
          Length = 1650

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -1

Query: 217 PKGFXXPXGXXXXPGLSSXXGVLGXKGK--AIGPXEGKWP--KPXXNGLKGT 74
           PKG   P G    PG     G  G  G   AIGP   K P  KP   G+ G+
Sbjct: 549 PKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGS 600


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,746,165
Number of Sequences: 237096
Number of extensions: 2464676
Number of successful extensions: 10511
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8659
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13047299170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)