Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_M10
         (846 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   0.88 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   0.88 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   8.2  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 656 TTSQRWSRGSTPRSLSTSRANNHHIKP 576
           T +Q WSRG+T  SL  S  +   + P
Sbjct: 18  TQAQHWSRGNTWLSLDNSNMSMSSVGP 44


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 656 TTSQRWSRGSTPRSLSTSRANNHHIKP 576
           T +Q WSRG+T  SL  S  +   + P
Sbjct: 18  TQAQHWSRGNTWLSLDNSNMSMSSVGP 44


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 1   YWISASQWHYTRLVVTQI 54
           YW+S+SQ+H  + +  Q+
Sbjct: 243 YWMSSSQYHMPKEIRGQL 260


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 619 RGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAK 717
           R +LPR ++  +   LF Y  P  SE ++  ++
Sbjct: 603 RLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSR 635


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 619 RGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAK 717
           R +LPR ++  +   LF Y  P  SE ++  ++
Sbjct: 603 RLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSR 635


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 1   YWISASQWHYTRLVVTQI 54
           YW+S+SQ+H  + +  Q+
Sbjct: 243 YWMSSSQYHMPKEIRGQL 260


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 6/30 (20%), Positives = 16/30 (53%)
 Frame = +1

Query: 433 VLDPAQDHQPITEASYVNIPVIALCNTDSP 522
           ++DP ++++   E   + IP++   +   P
Sbjct: 167 IVDPVEENETYDEFDTIRIPIVRSLSKSPP 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,133
Number of Sequences: 438
Number of extensions: 5447
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)