Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_M08
(850 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1148 - 24693323-24693877,24694092-24694315,24694519-246946... 34 0.16
11_06_0542 + 24777453-24777632,24777654-24778478,24778576-247793... 31 1.2
05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376... 31 1.2
01_06_0912 + 32933362-32933515,32933628-32933697,32933893-329340... 31 1.2
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 31 1.5
04_04_0675 + 27183826-27184443 31 1.5
03_05_0612 + 26117306-26118045,26118151-26118680,26119247-261192... 31 1.5
12_02_0254 + 16451683-16451985 30 2.0
04_03_0856 + 20336390-20336906,20337276-20337397 30 2.0
05_06_0141 - 25964706-25965473 30 2.7
08_01_1034 - 10482670-10483400,10483442-10483964 29 3.5
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 29 3.5
01_01_0347 + 2765517-2767109,2767214-2767228 29 3.5
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 29 4.7
08_01_0966 + 9751198-9751530,9752182-9752337,9753145-9753240,975... 29 4.7
04_04_0981 + 29912275-29912814 29 4.7
02_04_0304 + 21860661-21860784,21861435-21862044,21862557-218627... 29 4.7
02_02_0131 - 7065762-7065813,7065907-7065992,7066080-7066150,706... 29 4.7
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 29 6.2
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 29 6.2
03_01_0453 - 3471656-3471819,3472416-3472580,3473062-3473145,347... 29 6.2
03_01_0451 + 3461229-3461561,3462043-3462290,3462425-3462716,346... 29 6.2
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 28 8.2
11_03_0191 - 11366831-11367676 28 8.2
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 28 8.2
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 28 8.2
09_01_0032 - 541411-541737,542751-543752 28 8.2
08_02_1458 - 27270834-27271320,27271752-27271961,27272627-272736... 28 8.2
08_02_0229 - 14540302-14540736 28 8.2
03_05_0840 + 28101420-28101779,28101878-28101991,28102131-281022... 28 8.2
03_04_0140 + 17638335-17638583,17638843-17639061,17639206-176394... 28 8.2
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 28 8.2
>08_02_1148 -
24693323-24693877,24694092-24694315,24694519-24694636,
24694761-24695132,24696998-24697324
Length = 531
Score = 33.9 bits (74), Expect = 0.16
Identities = 30/97 (30%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Frame = +1
Query: 97 SVDTAPSPSRRRAFSPGRLPGTWRRRRSPPIMRGDVTFATGGNHVP---EKERLERGGSN 267
S D P SPG P WRRRR + RG GG ++L GG
Sbjct: 6 SSDLPPRAGAGAGASPG-WPQRWRRRRQRGVERGGAVSGGGGGVFSIGVGGKKLHHGGGG 64
Query: 268 LGGLCWRRGLAAWRTRQLVSGPSRRCARSSRNGRTVT 378
GG LA R V+G S ++ GR T
Sbjct: 65 -GGEMTEEELAKVEGRVCVNGASAAACLHTQQGRKGT 100
>11_06_0542 +
24777453-24777632,24777654-24778478,24778576-24779319,
24779422-24780354,24780456-24780938,24780969-24781082,
24781240-24781636,24781732-24782024,24782392-24782802
Length = 1459
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 314 RVRQAARPRLQHRPPRLEPPRSNRSFSG 231
+V+Q L HRPP PPR++RSF G
Sbjct: 606 KVKQQVLQGLHHRPPP-HPPRADRSFKG 632
>05_04_0124 + 18232961-18236636,18236810-18237288,18237549-18237629,
18238033-18238041,18238096-18238248
Length = 1465
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 477 CHHCDCDEDTVEHTLAYCPAWLEQRRVLVSQIGPDLSLP 593
C CD E+T++H L CP + V++S IG LP
Sbjct: 1273 CVLCDQHEETIDHILIACPESRQLWWVVLSSIGLPQCLP 1311
>01_06_0912 +
32933362-32933515,32933628-32933697,32933893-32934035,
32934127-32934637,32934693-32934729,32935254-32935350,
32936774-32937153
Length = 463
Score = 31.1 bits (67), Expect = 1.2
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 10/106 (9%)
Frame = -2
Query: 663 WCTRRSRASPSRTHRC--RASWPRRSAAISP-------VLFARQGHGVAPAMRGNMRAYA 511
W ++R A+ S+ H R+SWPRR +P V+ A G G G R A
Sbjct: 350 WLSQRRHATASQEHHGWQRSSWPRRRLEAAPTWTAALLVVTAEAGGGSPCGRGGGWRRTA 409
Query: 510 RPCPRRSHSGDTPSSVPSGRCDAGTGQNTH-GR*ASASTGR*DALG 376
+ +G + + R D+G ++ G A A G D +G
Sbjct: 410 MLVGDAAEAGGSAEADGDARRDSGPWRSAEAGGGAEAEGGVMDGVG 455
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 327 RTVEAVRPVLAEWANRDQGRLTFRLTQMLTGHGCFGRYLHRIARREPT 470
+ VE + LA+W + + G+ T TG C+G L + R++P+
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPS 237
>04_04_0675 + 27183826-27184443
Length = 205
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -2
Query: 669 ARWCTRRSRASPSRTHRCRASWPRRSAAISPVLFARQGHGVAPAMRGNMRA-YARPCPRR 493
AR T R R + R H A W + A +P ARQ +R +R+ RPCP
Sbjct: 30 ARAYTAR-RLAVGRAHLTSADWAAVADAATPTKTARQCRHKVEKLRRRLRSKRRRPCPLL 88
Query: 492 SH----SGDTPSSVPS 457
G +PS+ PS
Sbjct: 89 DAIDLLDGPSPSASPS 104
>03_05_0612 +
26117306-26118045,26118151-26118680,26119247-26119278,
26119910-26121175
Length = 855
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Frame = +3
Query: 285 EAWSRRLANPSAGL--RTVEAVRPVLAEWANRDQGRLTFRLTQMLTGHGCFGRYLHRIAR 458
EA+ +N G+ R +E+ + W G++ L + H C R
Sbjct: 512 EAFFADQSNSGRGMASRLLESQKDWKGLWKINAPGKMKIILWR--AAHECLATGFQLPRR 569
Query: 459 REPTME-CHHCDCDEDTVEHTLAYCP----AWLEQRRVLVSQIG 575
P+ + C C+ D DTVEH +CP W E +R ++G
Sbjct: 570 HIPSTDGCVFCNRD-DTVEHVFLFCPFAAQIWEEIKRKCAVKLG 612
>12_02_0254 + 16451683-16451985
Length = 100
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 397 RKVRRPWSRFAHSARTGRTASTVRRPADGF-AKRRDHASSTDRRDWSLRALI 245
R+ R WS+ GR S R+PA G + + + RR WS+R +
Sbjct: 6 RRWGRGWSQLQRWEGVGRKRSRQRKPAGGIEGEVEEDGEAWSRRRWSMRGSV 57
>04_03_0856 + 20336390-20336906,20337276-20337397
Length = 212
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -2
Query: 561 QGHGVAPAMRGNMRAYARPCPRRSHSGDTPSSVPSGRCDAGTGQNTHGR*ASASTGR 391
+G AP G RA+ P P S + P+ +GR D G G + G A AS R
Sbjct: 14 RGDASAPTRVGRRRAF--PLPFASPPPEWPAGKLAGRKDGGGGASLEGAAAGASRRR 68
>05_06_0141 - 25964706-25965473
Length = 255
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -1
Query: 847 RCCXARXAFPLSCPLPSPGEAAIYRGRSRXKALFRP-PARRRRIGA 713
RC AR +CP PGEAA R R P P RRR GA
Sbjct: 68 RCARARSHDWTACPYAHPGEAARRRDPRRVAYTGEPCPDFRRRPGA 113
>08_01_1034 - 10482670-10483400,10483442-10483964
Length = 417
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 17 KQYRISKRLFLQLCSELKPLLPGSYTNPWIPHRLLRGGVRS 139
+Q IS L C+ P + G++ N WI + + + GVRS
Sbjct: 107 EQLTISIELHEGCCARAVPAVHGAHANAWIRYAMEQQGVRS 147
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 296 RPRLQHRPPRLEPPRSNRSFSGTWFPPVAKVTSPRIIGGERLRLQVPGRR 147
RP+L+ PP RS + P A+ TSP I GG+R P R+
Sbjct: 192 RPQLRSDYSTHRPPPGGRSRGRSRHPRKAESTSPSISGGDRGSRSGPWRQ 241
>01_01_0347 + 2765517-2767109,2767214-2767228
Length = 535
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +2
Query: 674 GGGGTREGELIPLR--TYPSPPSRGSEKGLXPTPAP 775
GGGG RE +IP R +P PP P+P P
Sbjct: 54 GGGGDRELFIIPRRESAHPGPPDINLPLSADPSPPP 89
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 775 RGRSRXKALFRPPARRRRIGAERDEL 698
RGR R +A PPA+RRR+ +E+
Sbjct: 73 RGRGRSRAAPSPPAKRRRVEEPEEEV 98
>08_01_0966 +
9751198-9751530,9752182-9752337,9753145-9753240,
9753599-9753719,9754027-9754196
Length = 291
Score = 29.1 bits (62), Expect = 4.7
Identities = 26/93 (27%), Positives = 37/93 (39%)
Frame = -3
Query: 302 AARPRLQHRPPRLEPPRSNRSFSGTWFPPVAKVTSPRIIGGERLRLQVPGRRPGENARRL 123
AA P +HR P L PRS R + PP ++ G G G A L
Sbjct: 17 AASPPARHRHPALAAPRSRRPIN----PP--RLRCRAAAGAAATTTTTTGGGGGGGALVL 70
Query: 122 EGDGAVSTDLCMTQVVTASIQSIIAKIDVSKFY 24
EG GA + + + + VT ++ + FY
Sbjct: 71 EGSGAGA--VAVREFVTLDELRAAVRLRIRTFY 101
>04_04_0981 + 29912275-29912814
Length = 179
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +2
Query: 521 RILPRMAGATPCPCLA------NRTGLIAADRRGHDARQR*VLEGDARL-LRVHHLAEGG 679
R+ P A A PCPC A + + A+ R ++E + R+ LR +A GG
Sbjct: 30 RLCPECAHARPCPCAASSSSPSSSSSSAASGSAAVVGRVYSLIERERRMGLRSRSVAAGG 89
Query: 680 GGTREGELI 706
GG G ++
Sbjct: 90 GGGGRGIVV 98
>02_04_0304 +
21860661-21860784,21861435-21862044,21862557-21862771,
21863072-21863192,21863660-21863772,21863877-21864106,
21864428-21864543,21864675-21864773,21865394-21865639,
21866091-21866190,21866280-21866486,21866584-21866805
Length = 800
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 495 DEDTVEHTLAYCPAWLEQRRV---LVSQIGPDLSLPTVVATMLGSDESWKAML 644
D+D +E AYC A+LE+RR L+ + LP+ V L D WKA L
Sbjct: 434 DDDGLEQLRAYCRAFLEERRATGNLMDKWVIANGLPSEVEYAL--DFPWKASL 484
>02_02_0131 -
7065762-7065813,7065907-7065992,7066080-7066150,
7066563-7066638,7066977-7067078,7068025-7068123,
7068208-7068339
Length = 205
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +3
Query: 198 RCDLRDRGEPRPGEGAIRARRLQSRRSVLEAWSRRLANPSAGLRTVEAVRPVLAEWANRD 377
R +R RGE G A RA R R+ L ++ ++V L+ + +
Sbjct: 10 RGGVRGRGEGEEGSLARRAWRQYLRQLQLHPLRTKMITAGCLAGVSDSVAQKLSGYQRIE 69
Query: 378 QGRLTFRLTQMLTGHGCFGRYLHRI 452
+ RL ++ G FG +LH++
Sbjct: 70 KRRLLLKMLFGFAYGGPFGHFLHKV 94
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +2
Query: 707 PLRTYPSPPSRG----SEKGLXPTPAPVNGGFPR*R*XATKGESXP 832
P R P PPS S+ P PAP GG P R A GE+ P
Sbjct: 65 PSRAPPPPPSHHERAPSDAPPPPPPAPYAGGSPYHRHAAGGGETPP 110
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 106 TAPSPSRRRAFSPGRLPGTWRRRRSP 183
TAPSP R +P R PG+ RRRSP
Sbjct: 293 TAPSPIRHGG-TPSRRPGSPIRRRSP 317
>03_01_0453 -
3471656-3471819,3472416-3472580,3473062-3473145,
3473304-3473375,3473496-3473574,3473894-3473990,
3474064-3474116,3474257-3474386,3474464-3474498,
3476108-3476212,3476759-3476833,3477671-3477799,
3477918-3478097,3478737-3478820,3478943-3479059,
3479170-3479242,3479316-3479437,3479519-3479641,
3479917-3479989,3480218-3480396,3480699-3480837,
3481105-3481259,3481570-3481875
Length = 912
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 234 GEGAIRARRLQSRRSVLEAWSRRLANPSAGLRTVEAVRPV--LAEWANRDQGRLTFRLTQ 407
G GAIR + + SV ++ + L+ PS G+R+ E + E+ GR L
Sbjct: 6 GGGAIRVLNVAEKPSVAKSVAEILSRPSGGMRSREGRSRYNRVFEFDYSIGGRACHMLVT 65
Query: 408 MLTGH 422
+TGH
Sbjct: 66 SVTGH 70
>03_01_0451 +
3461229-3461561,3462043-3462290,3462425-3462716,
3463057-3463209,3463288-3463674
Length = 470
Score = 28.7 bits (61), Expect = 6.2
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = -3
Query: 308 RQAARPRLQHRPPRLEPPRSNRSFSGTWFPPVAKVTSPRIIGGERLRLQVPGRRPGENAR 129
R+A RPR+ HRPP PPR R G A+ + + E R P GE +
Sbjct: 19 RRAPRPRVLHRPP---PPR--RRLEG-----AARPRAVAVAVNEARRRWPPAEGGGEEGK 68
Query: 128 RLEGDGAVSTDLCMTQVVT 72
E D A +LC+ V++
Sbjct: 69 --ETDLATLGNLCVDVVLS 85
>12_02_0953 -
24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 28.3 bits (60), Expect = 8.2
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = -3
Query: 314 RVRQAARPRLQHRPPRLEPPRSNRSFSGTWFPPVAKVTSPRIIGGERLR-LQVPGRRPGE 138
R ++ P P R + RS G W PP + P +GG + PGR G+
Sbjct: 82 RKPESPAPTPSKLPFRTPEKAAARSRFG-WVPPRGEEQPPPRVGGTPYSAVSTPGRHRGK 140
Query: 137 N--ARRLEGDGAVSTDLCMTQVVTASIQSI 54
+ A EG G ST T+ VT SI
Sbjct: 141 SSAAAASEGGGG-STQSTPTKSVTKPAYSI 169
>11_03_0191 - 11366831-11367676
Length = 281
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -3
Query: 272 PRLEPPRSNRSFSGTWFPPVAKVTSPRIIGGERLRLQVPGRRP 144
P +EP ++ S T P + + PR + R + PG++P
Sbjct: 204 PEIEPDITDPSEDATPVPRITFIGGPRTLSNARKSTRPPGKKP 246
>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 118 PSRRRAFSPGRLPGTWRRRRSPPIMRGDVTFATGGNHVPEK 240
P+ +S GR G RR+ +PP GD A VP+K
Sbjct: 2800 PASGGEWSAGRFSGGCRRKEAPPCGGGDGFLALPRMKVPDK 2840
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = -1
Query: 805 LPSPGEA-AIYRGRSRXKALFRPPARRRRIGAERDELSFSRSAASFCEMVYSQKSSIAFQ 629
LPSP + GRS A+R R+ A D + YSQ+ S +
Sbjct: 358 LPSPESGNPLLTGRSAQSTFDPREAKRLRLDAAADPYDTRAGSEGLYSAGYSQRESARSE 417
Query: 628 DSSLPSI 608
SS P+I
Sbjct: 418 RSSSPAI 424
>09_01_0032 - 541411-541737,542751-543752
Length = 442
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 201 CDLRDRGEPRPGEGAIRARRLQSRRSVLEAWSRRL 305
C +R+ EP+P G R + + VL AWS +
Sbjct: 316 CLIRNTREPQPYRGICRKQTFSLKDRVLNAWSAEI 350
>08_02_1458 - 27270834-27271320,27271752-27271961,27272627-27273624,
27274099-27274195,27274278-27274393,27274465-27274590,
27275123-27275233,27275347-27275428,27275844-27275989,
27276457-27276650,27277277-27277388,27277869-27278001,
27278295-27278437,27278488-27278562,27278830-27278937,
27279072-27279197,27279752-27279836,27280358-27280440,
27280545-27280625,27280709-27280789,27281960-27282034,
27282112-27282498,27282902-27283036
Length = 1396
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 17 KQYRISKRLFLQLCSELKPLLPGSYTNPWIPHRLLR 124
+ Y + K +FL E+ P LP S IP+ +LR
Sbjct: 1235 RPYIVPKLIFLDQLCEMSPYLPRSTLEVHIPYTILR 1270
>08_02_0229 - 14540302-14540736
Length = 144
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 456 GRCDAGTGQNTHGR*ASASTGR*D 385
G CDAG G T GR A+A+ G D
Sbjct: 93 GGCDAGGGDGTAGRRANAAVGAAD 116
>03_05_0840 +
28101420-28101779,28101878-28101991,28102131-28102229,
28102800-28102874,28103311-28103378,28104015-28104087
Length = 262
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 260 PPRSNRSFSGTWFPPVAKVTSPRIIGGERLRLQVPGRRPGENAR 129
PPR+ S ++ PP + +SPR GG RL + +PG R
Sbjct: 21 PPRAEPDASSSFHPPASSSSSPR--GG---RLALAAAQPGSGRR 59
>03_04_0140 +
17638335-17638583,17638843-17639061,17639206-17639443,
17640614-17640809,17640888-17640942,17641495-17641645,
17642501-17642809,17642950-17643215,17643311-17644237,
17644386-17644712
Length = 978
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +2
Query: 557 PCLANRTGLIAADRRGHDARQR*VLEGDARLLRVHHLAEGGGGTREGELIPLRTYPSPP 733
P +A + A G AR+ L AR R L+ GGGG R+G + P PP
Sbjct: 13 PAMAAAQAPVVAAAWGVGARRGAALSSSARC-RALRLSRGGGGGRDGWVPPPVVGRMPP 70
>01_05_0195 -
19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +3
Query: 426 CFGRYLHRIARREPTMECHHCDCDEDTVEHTLAYCPAWLEQRRVLVSQIGPDLSLP 593
C+ Y R C CD E+T++H L CP + V + IG LP
Sbjct: 731 CWTTYRLRSRGLSHPDRCVLCDQCEETIDHLLVACPESRQLWWVALRAIGHSECLP 786
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,153,587
Number of Sequences: 37544
Number of extensions: 701323
Number of successful extensions: 3160
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3154
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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