BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_M07
(825 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB056059-3|BAB61780.1| 414|Homo sapiens MAGE E1c protein. 38 0.044
AB040529-1|BAB33380.1| 414|Homo sapiens MAGE-E1c protein. 38 0.044
AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 34 0.54
AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 34 0.54
AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 34 0.54
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 33 0.95
BC057784-1|AAH57784.1| 519|Homo sapiens FLJ14803 protein protein. 32 2.2
BC045618-1|AAH45618.1| 561|Homo sapiens FLJ14803 protein protein. 32 2.2
BC040553-1|AAH40553.1| 550|Homo sapiens coiled-coil domain cont... 32 2.2
AK074732-1|BAC11168.1| 561|Homo sapiens protein ( Homo sapiens ... 32 2.2
AK027709-1|BAB55314.1| 561|Homo sapiens protein ( Homo sapiens ... 32 2.2
AK027678-1|BAB55289.1| 203|Homo sapiens protein ( Homo sapiens ... 32 2.2
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.8
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.8
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.8
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.8
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.8
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.8
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.8
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.8
AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens ... 31 3.8
AB028965-1|BAA82994.2| 1019|Homo sapiens KIAA1042 protein protein. 31 5.1
U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein. 31 6.7
CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein. 31 6.7
BC142624-1|AAI42625.1| 955|Homo sapiens von Willebrand factor C... 31 6.7
BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5 pr... 31 6.7
AK056571-1|BAB71219.1| 955|Homo sapiens protein ( Homo sapiens ... 31 6.7
AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein. 31 6.7
AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein. 31 6.7
AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein. 31 6.7
BC025996-1|AAH25996.1| 141|Homo sapiens hypothetical LOC441046 ... 30 8.8
AF233453-1|AAF71262.1| 614|Homo sapiens RACK-like protein PRKCB... 30 8.8
>AB056059-3|BAB61780.1| 414|Homo sapiens MAGE E1c protein.
Length = 414
Score = 37.9 bits (84), Expect = 0.044
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 449 TSQLKESMCWPPLHPLASLLAVSPL-CIKPPSPAISATSIRSSNPRF--HTPTTPDLTS 616
T +++ PP HPLA +L+ S L C PPSP + + SS P F H P+ P L+S
Sbjct: 346 TKKVRSPCPLPPPHPLAPVLSFSSLSCSSPPSP-LPLLPLFSSFPSFSPHLPSPPLLSS 403
>AB040529-1|BAB33380.1| 414|Homo sapiens MAGE-E1c protein.
Length = 414
Score = 37.9 bits (84), Expect = 0.044
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 449 TSQLKESMCWPPLHPLASLLAVSPL-CIKPPSPAISATSIRSSNPRF--HTPTTPDLTS 616
T +++ PP HPLA +L+ S L C PPSP + + SS P F H P+ P L+S
Sbjct: 346 TKKVRSPCPLPPPHPLAPVLSFSSLSCSSPPSP-LPLLPLFSSFPSFSPHLPSPPLLSS 403
>AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 34.3 bits (75), Expect = 0.54
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 537 PPLRSRLHQSDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
PPL S L + + P S QPP P P P+ + PG +PP +++P
Sbjct: 48 PPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 34.3 bits (75), Expect = 0.54
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 537 PPLRSRLHQSDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
PPL S L + + P S QPP P P P+ + PG +PP +++P
Sbjct: 48 PPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting
protein 1 protein.
Length = 495
Score = 34.3 bits (75), Expect = 0.54
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 537 PPLRSRLHQSDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
PPL S L + + P S QPP P P P+ + PG +PP +++P
Sbjct: 48 PPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 33.5 bits (73), Expect = 0.95
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 465 SQCAGHPFILSHHYWRSRPYASSHPPLRSRLHQSDHQIPDSIHQPPQ 605
S C G PF S+ S P++S HP + +H S Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>BC057784-1|AAH57784.1| 519|Homo sapiens FLJ14803 protein protein.
Length = 519
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 506 LAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKAS 676
LA + + PPSP+I S+ S +P T+P T+ + + L+G+ +G S
Sbjct: 120 LAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176
>BC045618-1|AAH45618.1| 561|Homo sapiens FLJ14803 protein protein.
Length = 561
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 506 LAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKAS 676
LA + + PPSP+I S+ S +P T+P T+ + + L+G+ +G S
Sbjct: 120 LAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176
>BC040553-1|AAH40553.1| 550|Homo sapiens coiled-coil domain
containing 60 protein.
Length = 550
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +2
Query: 491 PLASLLAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVK 670
P +S+++V+P +PPS TS + + T PD + +N L +L+ VR +
Sbjct: 250 PQSSMISVNPGSDEPPSVNTQVTSSKDIEDNESSSTKPDEEPLYMN-LQKLLEMVREDAR 308
Query: 671 ASVVIRGSISVSHPLV 718
+V I + P +
Sbjct: 309 RTVTIENGMQRKAPSI 324
>AK074732-1|BAC11168.1| 561|Homo sapiens protein ( Homo sapiens
cDNA FLJ90251 fis, clone NT2RM4000115. ).
Length = 561
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 506 LAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKAS 676
LA + + PPSP+I S+ S +P T+P T+ + + L+G+ +G S
Sbjct: 120 LAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176
>AK027709-1|BAB55314.1| 561|Homo sapiens protein ( Homo sapiens
cDNA FLJ14803 fis, clone NT2RP4001442. ).
Length = 561
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 506 LAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKAS 676
LA + + PPSP+I S+ S +P T+P T+ + + L+G+ +G S
Sbjct: 120 LAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176
>AK027678-1|BAB55289.1| 203|Homo sapiens protein ( Homo sapiens
cDNA FLJ14772 fis, clone NT2RP3004332. ).
Length = 203
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 506 LAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKAS 676
LA + + PPSP+I S+ S +P T+P T+ + + L+G+ +G S
Sbjct: 120 LAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ30019 fis, clone 3NB692000545. ).
Length = 262
Score = 31.5 bits (68), Expect = 3.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 594 QPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPSAYLTPSSL 722
+PP + PFP +P +P FAP L+PP +AP + P L
Sbjct: 85 RPPSS--PFPPVPGSP----FAPSLRPPAWMDAPRLPVRPGVL 121
>AB028965-1|BAA82994.2| 1019|Homo sapiens KIAA1042 protein protein.
Length = 1019
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 485 LHPLASLLAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSIS 622
LHP L V+P P+PA +TS S P TP TP S++
Sbjct: 743 LHPSDELTRVTPSLNSAPTPACGSTSHLKSTP-VATPCTPRRLSLA 787
>U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 174 PDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219
>CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 174 PDSFHQPNNT--PFPLSPNSPYPPSPASSAYPNSPASSGPGSPFQLPA 219
>BC142624-1|AAI42625.1| 955|Homo sapiens von Willebrand factor C and
EGF domains protein.
Length = 955
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +2
Query: 476 WPPLHPLASLLAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTS 616
WPPL P L S L + PSP S T I PR +PTT L++
Sbjct: 887 WPPL-PGTLLTEASALSMMDPSP--SKTPITLLGPRVLSPTTSRLST 930
>BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5
protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 174 PDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219
>AK056571-1|BAB71219.1| 955|Homo sapiens protein ( Homo sapiens cDNA
FLJ32009 fis, clone NT2RP7009498, weakly similar to
FIBULIN-1, ISOFORM A PRECURSOR. ).
Length = 955
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +2
Query: 476 WPPLHPLASLLAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTS 616
WPPL P L S L + PSP S T I PR +PTT L++
Sbjct: 887 WPPL-PGTLLTEASALSMMDPSP--SKTPITLLGPRVLSPTTSRLST 930
>AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 174 PDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219
>AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein.
Length = 462
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 171 PDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 216
>AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 174 PDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219
>BC025996-1|AAH25996.1| 141|Homo sapiens hypothetical LOC441046
protein.
Length = 141
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 476 WPPLHPLASLLAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAV 643
W P P ++ L+ S C PP A+S + PR + P + T + + P A+
Sbjct: 85 WGPCPPASASLSPSATCSSPPPCHQGASSTWPTPPRGYHPASTADTHLRVPPRGAL 140
>AF233453-1|AAF71262.1| 614|Homo sapiens RACK-like protein PRKCBP1
protein.
Length = 614
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/72 (22%), Positives = 30/72 (41%)
Frame = +2
Query: 515 SPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKASVVIRGS 694
S + + P+PA + + ++ P T P + + N + K + S + +
Sbjct: 257 STVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSSVQQKEITQSPSTSTITLVT 316
Query: 695 ISVSHPLVTGHG 730
+ S PLVT G
Sbjct: 317 STQSSPLVTSSG 328
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,092,648
Number of Sequences: 237096
Number of extensions: 2719385
Number of successful extensions: 11238
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 10459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11162
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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