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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_M07
         (825 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB056059-3|BAB61780.1|  414|Homo sapiens MAGE E1c protein.             38   0.044
AB040529-1|BAB33380.1|  414|Homo sapiens MAGE-E1c protein.             38   0.044
AL359706-1|CAI12865.1|  495|Homo sapiens nuclear fragile X menta...    34   0.54 
AL354816-1|CAC40689.2|  495|Homo sapiens nuclear fragile X menta...    34   0.54 
AF159548-1|AAF15315.1|  495|Homo sapiens nuclear FMRP interactin...    34   0.54 
AK127507-1|BAC87013.1|  130|Homo sapiens protein ( Homo sapiens ...    33   0.95 
BC057784-1|AAH57784.1|  519|Homo sapiens FLJ14803 protein protein.     32   2.2  
BC045618-1|AAH45618.1|  561|Homo sapiens FLJ14803 protein protein.     32   2.2  
BC040553-1|AAH40553.1|  550|Homo sapiens coiled-coil domain cont...    32   2.2  
AK074732-1|BAC11168.1|  561|Homo sapiens protein ( Homo sapiens ...    32   2.2  
AK027709-1|BAB55314.1|  561|Homo sapiens protein ( Homo sapiens ...    32   2.2  
AK027678-1|BAB55289.1|  203|Homo sapiens protein ( Homo sapiens ...    32   2.2  
X89894-1|CAA61984.1|  443|Homo sapiens nuclear receptor protein.       31   3.8  
S81243-1|AAB36006.1|  684|Homo sapiens CHN protein.                    31   3.8  
D78579-1|BAA11419.1|  626|Homo sapiens neuron derived orphan rec...    31   3.8  
AL359710-3|CAI95139.1|  443|Homo sapiens nuclear receptor subfam...    31   3.8  
AL359710-2|CAI95138.1|  626|Homo sapiens nuclear receptor subfam...    31   3.8  
AL359710-1|CAM16648.1|  637|Homo sapiens nuclear receptor subfam...    31   3.8  
AL358937-4|CAI95320.1|  626|Homo sapiens nuclear receptor subfam...    31   3.8  
AL358937-3|CAM22558.1|  637|Homo sapiens nuclear receptor subfam...    31   3.8  
AK054581-1|BAB70764.1|  262|Homo sapiens protein ( Homo sapiens ...    31   3.8  
AB028965-1|BAA82994.2| 1019|Homo sapiens KIAA1042 protein protein.     31   5.1  
U73825-1|AAB95090.1|  465|Homo sapiens Smad5 protein.                  31   6.7  
CR457424-1|CAG33705.1|  465|Homo sapiens MADH5 protein.                31   6.7  
BC142624-1|AAI42625.1|  955|Homo sapiens von Willebrand factor C...    31   6.7  
BC009682-1|AAH09682.1|  465|Homo sapiens SMAD family member 5 pr...    31   6.7  
AK056571-1|BAB71219.1|  955|Homo sapiens protein ( Homo sapiens ...    31   6.7  
AF010601-1|AAB66353.1|  465|Homo sapiens SMAD5 protein.                31   6.7  
AF009744-1|AAB82655.1|  462|Homo sapiens Mad homolog protein.          31   6.7  
AF009678-1|AAB72180.1|  465|Homo sapiens Smad5 protein.                31   6.7  
BC025996-1|AAH25996.1|  141|Homo sapiens hypothetical LOC441046 ...    30   8.8  
AF233453-1|AAF71262.1|  614|Homo sapiens RACK-like protein PRKCB...    30   8.8  

>AB056059-3|BAB61780.1|  414|Homo sapiens MAGE E1c protein.
          Length = 414

 Score = 37.9 bits (84), Expect = 0.044
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = +2

Query: 449 TSQLKESMCWPPLHPLASLLAVSPL-CIKPPSPAISATSIRSSNPRF--HTPTTPDLTS 616
           T +++     PP HPLA +L+ S L C  PPSP +    + SS P F  H P+ P L+S
Sbjct: 346 TKKVRSPCPLPPPHPLAPVLSFSSLSCSSPPSP-LPLLPLFSSFPSFSPHLPSPPLLSS 403


>AB040529-1|BAB33380.1|  414|Homo sapiens MAGE-E1c protein.
          Length = 414

 Score = 37.9 bits (84), Expect = 0.044
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = +2

Query: 449 TSQLKESMCWPPLHPLASLLAVSPL-CIKPPSPAISATSIRSSNPRF--HTPTTPDLTS 616
           T +++     PP HPLA +L+ S L C  PPSP +    + SS P F  H P+ P L+S
Sbjct: 346 TKKVRSPCPLPPPHPLAPVLSFSSLSCSSPPSP-LPLLPLFSSFPSFSPHLPSPPLLSS 403


>AL359706-1|CAI12865.1|  495|Homo sapiens nuclear fragile X mental
           retardation protein interacting protein 1 protein.
          Length = 495

 Score = 34.3 bits (75), Expect = 0.54
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +3

Query: 537 PPLRSRLHQSDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
           PPL S L  +  + P S  QPP      P  P  P+  +  PG +PP  +++P
Sbjct: 48  PPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98


>AL354816-1|CAC40689.2|  495|Homo sapiens nuclear fragile X mental
           retardation protein interacting protein 1 protein.
          Length = 495

 Score = 34.3 bits (75), Expect = 0.54
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +3

Query: 537 PPLRSRLHQSDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
           PPL S L  +  + P S  QPP      P  P  P+  +  PG +PP  +++P
Sbjct: 48  PPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98


>AF159548-1|AAF15315.1|  495|Homo sapiens nuclear FMRP interacting
           protein 1 protein.
          Length = 495

 Score = 34.3 bits (75), Expect = 0.54
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +3

Query: 537 PPLRSRLHQSDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
           PPL S L  +  + P S  QPP      P  P  P+  +  PG +PP  +++P
Sbjct: 48  PPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98


>AK127507-1|BAC87013.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45600 fis, clone BRTHA3020369. ).
          Length = 130

 Score = 33.5 bits (73), Expect = 0.95
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = +3

Query: 465 SQCAGHPFILSHHYWRSRPYASSHPPLRSRLHQSDHQIPDSIHQPPQ 605
           S C G PF  S+    S P++S HP +   +H S  Q P  + QPPQ
Sbjct: 85  SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129


>BC057784-1|AAH57784.1|  519|Homo sapiens FLJ14803 protein protein.
          Length = 519

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 506 LAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKAS 676
           LA + +   PPSP+I   S+ S +P     T+P  T+  +   +  L+G+ +G   S
Sbjct: 120 LAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176


>BC045618-1|AAH45618.1|  561|Homo sapiens FLJ14803 protein protein.
          Length = 561

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 506 LAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKAS 676
           LA + +   PPSP+I   S+ S +P     T+P  T+  +   +  L+G+ +G   S
Sbjct: 120 LAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176


>BC040553-1|AAH40553.1|  550|Homo sapiens coiled-coil domain
           containing 60 protein.
          Length = 550

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 20/76 (26%), Positives = 36/76 (47%)
 Frame = +2

Query: 491 PLASLLAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVK 670
           P +S+++V+P   +PPS     TS +       + T PD   + +N L  +L+ VR   +
Sbjct: 250 PQSSMISVNPGSDEPPSVNTQVTSSKDIEDNESSSTKPDEEPLYMN-LQKLLEMVREDAR 308

Query: 671 ASVVIRGSISVSHPLV 718
            +V I   +    P +
Sbjct: 309 RTVTIENGMQRKAPSI 324


>AK074732-1|BAC11168.1|  561|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90251 fis, clone NT2RM4000115. ).
          Length = 561

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 506 LAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKAS 676
           LA + +   PPSP+I   S+ S +P     T+P  T+  +   +  L+G+ +G   S
Sbjct: 120 LAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176


>AK027709-1|BAB55314.1|  561|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14803 fis, clone NT2RP4001442. ).
          Length = 561

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 506 LAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKAS 676
           LA + +   PPSP+I   S+ S +P     T+P  T+  +   +  L+G+ +G   S
Sbjct: 120 LAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176


>AK027678-1|BAB55289.1|  203|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14772 fis, clone NT2RP3004332. ).
          Length = 203

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 506 LAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKAS 676
           LA + +   PPSP+I   S+ S +P     T+P  T+  +   +  L+G+ +G   S
Sbjct: 120 LAATQIPPAPPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176


>X89894-1|CAA61984.1|  443|Homo sapiens nuclear receptor protein.
          Length = 443

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 35  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86


>S81243-1|AAB36006.1|  684|Homo sapiens CHN protein.
          Length = 684

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 93  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144


>D78579-1|BAA11419.1|  626|Homo sapiens neuron derived orphan
           receptor protein.
          Length = 626

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 35  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86


>AL359710-3|CAI95139.1|  443|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 443

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 35  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86


>AL359710-2|CAI95138.1|  626|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 626

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 35  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86


>AL359710-1|CAM16648.1|  637|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 637

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 46  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97


>AL358937-4|CAI95320.1|  626|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 626

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 35  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86


>AL358937-3|CAM22558.1|  637|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 637

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 46  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97


>AK054581-1|BAB70764.1|  262|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30019 fis, clone 3NB692000545. ).
          Length = 262

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +3

Query: 594 QPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPSAYLTPSSL 722
           +PP +  PFP +P +P    FAP L+PP   +AP   + P  L
Sbjct: 85  RPPSS--PFPPVPGSP----FAPSLRPPAWMDAPRLPVRPGVL 121


>AB028965-1|BAA82994.2| 1019|Homo sapiens KIAA1042 protein protein.
          Length = 1019

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +2

Query: 485 LHPLASLLAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSIS 622
           LHP   L  V+P     P+PA  +TS   S P   TP TP   S++
Sbjct: 743 LHPSDELTRVTPSLNSAPTPACGSTSHLKSTP-VATPCTPRRLSLA 787


>U73825-1|AAB95090.1|  465|Homo sapiens Smad5 protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
           PDS HQP  T  PFP  P +PY    A    P  P SS   S +  P+
Sbjct: 174 PDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219


>CR457424-1|CAG33705.1|  465|Homo sapiens MADH5 protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
           PDS HQP  T  PFP  P +PY    A    P  P SS   S +  P+
Sbjct: 174 PDSFHQPNNT--PFPLSPNSPYPPSPASSAYPNSPASSGPGSPFQLPA 219


>BC142624-1|AAI42625.1|  955|Homo sapiens von Willebrand factor C and
            EGF domains protein.
          Length = 955

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 20/47 (42%), Positives = 24/47 (51%)
 Frame = +2

Query: 476  WPPLHPLASLLAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTS 616
            WPPL P   L   S L +  PSP  S T I    PR  +PTT  L++
Sbjct: 887  WPPL-PGTLLTEASALSMMDPSP--SKTPITLLGPRVLSPTTSRLST 930


>BC009682-1|AAH09682.1|  465|Homo sapiens SMAD family member 5
           protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
           PDS HQP  T  PFP  P +PY    A    P  P SS   S +  P+
Sbjct: 174 PDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219


>AK056571-1|BAB71219.1|  955|Homo sapiens protein ( Homo sapiens cDNA
            FLJ32009 fis, clone NT2RP7009498, weakly similar to
            FIBULIN-1, ISOFORM A PRECURSOR. ).
          Length = 955

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 20/47 (42%), Positives = 24/47 (51%)
 Frame = +2

Query: 476  WPPLHPLASLLAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTS 616
            WPPL P   L   S L +  PSP  S T I    PR  +PTT  L++
Sbjct: 887  WPPL-PGTLLTEASALSMMDPSP--SKTPITLLGPRVLSPTTSRLST 930


>AF010601-1|AAB66353.1|  465|Homo sapiens SMAD5 protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
           PDS HQP  T  PFP  P +PY    A    P  P SS   S +  P+
Sbjct: 174 PDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219


>AF009744-1|AAB82655.1|  462|Homo sapiens Mad homolog protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
           PDS HQP  T  PFP  P +PY    A    P  P SS   S +  P+
Sbjct: 171 PDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 216


>AF009678-1|AAB72180.1|  465|Homo sapiens Smad5 protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 579 PDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
           PDS HQP  T  PFP  P +PY    A    P  P SS   S +  P+
Sbjct: 174 PDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219


>BC025996-1|AAH25996.1|  141|Homo sapiens hypothetical LOC441046
           protein.
          Length = 141

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +2

Query: 476 WPPLHPLASLLAVSPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAV 643
           W P  P ++ L+ S  C  PP     A+S   + PR + P +   T + + P  A+
Sbjct: 85  WGPCPPASASLSPSATCSSPPPCHQGASSTWPTPPRGYHPASTADTHLRVPPRGAL 140


>AF233453-1|AAF71262.1|  614|Homo sapiens RACK-like protein PRKCBP1
           protein.
          Length = 614

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/72 (22%), Positives = 30/72 (41%)
 Frame = +2

Query: 515 SPLCIKPPSPAISATSIRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKASVVIRGS 694
           S + +  P+PA + + ++   P     T P +  +  N  +   K +      S +   +
Sbjct: 257 STVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSSVQQKEITQSPSTSTITLVT 316

Query: 695 ISVSHPLVTGHG 730
            + S PLVT  G
Sbjct: 317 STQSSPLVTSSG 328


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,092,648
Number of Sequences: 237096
Number of extensions: 2719385
Number of successful extensions: 11238
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 10459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11162
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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