Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_M06
(815 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 182 5e-46
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 182 7e-46
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 182 7e-46
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 177 1e-44
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 153 3e-37
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 153 3e-37
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 149 6e-36
BT022898-1|AAY55314.1| 320|Drosophila melanogaster IP12553p pro... 30 4.4
BT022867-1|AAY55283.1| 327|Drosophila melanogaster IP12753p pro... 30 4.4
BT022227-1|AAY54643.1| 312|Drosophila melanogaster IP12453p pro... 30 4.4
AE013599-2353|AAF57947.2| 463|Drosophila melanogaster CG6301-PA... 30 4.4
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 182 bits (443), Expect = 5e-46
Identities = 89/154 (57%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
Frame = +2
Query: 29 SSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVR 208
+ MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VR
Sbjct: 10 TDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVR 69
Query: 209 EPDRPGFKNQQEEIVEAVTIIXTPPMVWSVLLGYIENPHGLXXLXTVWA-XLFXKXAXSF 385
E DRPG K ++E+VEAVT++ TPPM+ +GYIE P GL L VWA L + F
Sbjct: 70 EADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRF 129
Query: 386 *KTGXNGKKRXSLNPLKNXXXXXGXQXXKKNFXK 487
K KK+ K G + + +F K
Sbjct: 130 YKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRK 163
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 182 bits (442), Expect = 7e-46
Identities = 89/152 (58%), Positives = 102/152 (67%), Gaps = 1/152 (0%)
Frame = +2
Query: 35 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 214
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 215 DRPGFKNQQEEIVEAVTIIXTPPMVWSVLLGYIENPHGLXXLXTVWA-XLFXKXAXSF*K 391
DRPG K ++E+VEAVT++ TPPM+ +GYIE P GL L VWA L + F K
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 392 TGXNGKKRXSLNPLKNXXXXXGXQXXKKNFXK 487
KK+ K G + + +F K
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRK 152
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 182 bits (442), Expect = 7e-46
Identities = 89/152 (58%), Positives = 102/152 (67%), Gaps = 1/152 (0%)
Frame = +2
Query: 35 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 214
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 215 DRPGFKNQQEEIVEAVTIIXTPPMVWSVLLGYIENPHGLXXLXTVWA-XLFXKXAXSF*K 391
DRPG K ++E+VEAVT++ TPPM+ +GYIE P GL L VWA L + F K
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 392 TGXNGKKRXSLNPLKNXXXXXGXQXXKKNFXK 487
KK+ K G + + +F K
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRK 152
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 177 bits (431), Expect = 1e-44
Identities = 80/107 (74%), Positives = 88/107 (82%)
Frame = +2
Query: 35 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 214
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 215 DRPGFKNQQEEIVEAVTIIXTPPMVWSVLLGYIENPHGLXXLXTVWA 355
DRPG K ++E+VEAVT++ TPPM+ +GYIE P GL L VWA
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWA 107
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 153 bits (371), Expect = 3e-37
Identities = 76/139 (54%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
Frame = +2
Query: 74 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGFKNQQEEIV 253
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG K ++E+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 254 EAVTIIXTPPMVWSVLLGYIENPHGLXXLXTVWA-XLFXKXAXSF*KTGXNGKKRXSLNP 430
EAVT++ TPPM+ +GYIE P GL L VWA L + F K KK+
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 431 LKNXXXXXGXQXXKKNFXK 487
K G + + +F K
Sbjct: 121 SKKWTDDLGKKSIENDFRK 139
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 153 bits (371), Expect = 3e-37
Identities = 76/139 (54%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
Frame = +2
Query: 74 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGFKNQQEEIV 253
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG K ++E+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 254 EAVTIIXTPPMVWSVLLGYIENPHGLXXLXTVWA-XLFXKXAXSF*KTGXNGKKRXSLNP 430
EAVT++ TPPM+ +GYIE P GL L VWA L + F K KK+
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 431 LKNXXXXXGXQXXKKNFXK 487
K G + + +F K
Sbjct: 121 SKKWTDDLGKKSIENDFRK 139
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 149 bits (360), Expect = 6e-36
Identities = 67/94 (71%), Positives = 75/94 (79%)
Frame = +2
Query: 74 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGFKNQQEEIV 253
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG K ++E+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 254 EAVTIIXTPPMVWSVLLGYIENPHGLXXLXTVWA 355
EAVT++ TPPM+ +GYIE P GL L VWA
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWA 94
>BT022898-1|AAY55314.1| 320|Drosophila melanogaster IP12553p
protein.
Length = 320
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 304 QQHRPNHRRSXDDGDSLHDLFLLIFEPGT 218
Q+H P H+R D + L+D F I EPGT
Sbjct: 43 QRHSPQHKRMIDPRELLND-FAAIKEPGT 70
>BT022867-1|AAY55283.1| 327|Drosophila melanogaster IP12753p
protein.
Length = 327
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 304 QQHRPNHRRSXDDGDSLHDLFLLIFEPGT 218
Q+H P H+R D + L+D F I EPGT
Sbjct: 50 QRHSPQHKRMIDPRELLND-FAAIKEPGT 77
>BT022227-1|AAY54643.1| 312|Drosophila melanogaster IP12453p
protein.
Length = 312
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 304 QQHRPNHRRSXDDGDSLHDLFLLIFEPGT 218
Q+H P H+R D + L+D F I EPGT
Sbjct: 35 QRHSPQHKRMIDPRELLND-FAAIKEPGT 62
>AE013599-2353|AAF57947.2| 463|Drosophila melanogaster CG6301-PA
protein.
Length = 463
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 304 QQHRPNHRRSXDDGDSLHDLFLLIFEPGT 218
Q+H P H+R D + L+D F I EPGT
Sbjct: 28 QRHSPQHKRMIDPRELLND-FAAIKEPGT 55
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,659,083
Number of Sequences: 53049
Number of extensions: 457660
Number of successful extensions: 721
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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