Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_L16
         (848 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041587-1|AAH41587.1|  669|Homo sapiens KRBA1 protein protein.        32   2.3  
BC033229-1|AAH33229.1|  669|Homo sapiens KRBA1 protein protein.        32   2.3  
AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens ...    29   4.3  
X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for ...    31   5.3  
M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.                    31   5.3  
BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1,...    31   5.3  
BC031341-1|AAH31341.1|  214|Homo sapiens family with sequence si...    31   5.3  
AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of compl...    31   5.3  

>BC041587-1|AAH41587.1|  669|Homo sapiens KRBA1 protein protein.
          Length = 669

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 22/64 (34%), Positives = 29/64 (45%)
 Frame = -3

Query: 735 PREVSVXAELALGHLRYSLTDVPPPVKLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERN 556
           P + S      L  L   L ++P PV  PAW C     RG    RRA  PR+ +A  E +
Sbjct: 189 PGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGP---RRA-EPRNWTADKEGS 244

Query: 555 TVRP 544
             +P
Sbjct: 245 APKP 248


>BC033229-1|AAH33229.1|  669|Homo sapiens KRBA1 protein protein.
          Length = 669

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 22/64 (34%), Positives = 29/64 (45%)
 Frame = -3

Query: 735 PREVSVXAELALGHLRYSLTDVPPPVKLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERN 556
           P + S      L  L   L ++P PV  PAW C     RG    RRA  PR+ +A  E +
Sbjct: 189 PGKGSPPGSSPLQGLENCLKEIPVPVLRPAWPCSSAADRGP---RRA-EPRNWTADKEGS 244

Query: 555 TVRP 544
             +P
Sbjct: 245 APKP 248


>AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45380 fis, clone BRHIP3020733. ).
          Length = 223

 Score = 29.1 bits (62), Expect(2) = 4.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 604 ATSVSATSPLCTLGTKHRAPADIIDRAPLPPNR 506
           A S+ A +P C L   HR    + D   LPP+R
Sbjct: 154 APSLPAQAPWCLLSPGHRGATSLPDTMMLPPSR 186



 Score = 21.0 bits (42), Expect(2) = 4.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 697 TPALFFDRCTAPSQTP 650
           TPAL+ D  + P+Q P
Sbjct: 147 TPALWVDAPSLPAQAP 162


>X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for
           complement component C1r. ).
          Length = 705

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 296 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 406
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 296 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 406
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1, r
           subcomponent protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 296 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 406
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>BC031341-1|AAH31341.1|  214|Homo sapiens family with sequence
           similarity 101, member B protein.
          Length = 214

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
 Frame = -3

Query: 750 FCPFAPREVSVXAELALGHLRYSLTDVPPPVKLPAWQCPRT------GSRGSFKRRRAFP 589
           F P  P+EV   + +     R+ + DV  P+ L    C +T      G+  ++K    F 
Sbjct: 96  FDPLPPKEVRYTSLVKYDSERHFIDDVQLPLGLAVASCSQTVTCVPNGTWRNYKAEVRFE 155

Query: 588 PRHHSARLERNTVRPP 541
           PRH   R    T+  P
Sbjct: 156 PRHRPTRFLSTTIVYP 171


>AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of
           complement component 1 protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 296 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 406
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,373,205
Number of Sequences: 237096
Number of extensions: 2829604
Number of successful extensions: 10066
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10062
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)