Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_L15
         (864 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    26   0.52 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   2.7  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    23   3.6  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 25.8 bits (54), Expect = 0.52
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = -1

Query: 681 TSPVLFFATRTRRCSAKAGQYASVCSAVSSLQPLQWWHFGVGSLRATRCR*RPKQPCP 508
           T P  + +  +RR +A       +CS+  S   + WW       RA R    P+  CP
Sbjct: 149 TDPFTYPSKMSRRRAAVLIAIVWICSSAISFPAIVWW-------RAVRTEEVPEDKCP 199


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 587 SHCSGGTSASAPSGRRGAGSDRNSRVP 507
           S CS GT++S  S      SDR++  P
Sbjct: 174 SECSLGTASSTSSTASSRNSDRSAGSP 200


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 63  MLTPVSLXRLHELNSTRLNLQRAFW 137
           +L P  +  LH    T LNL   FW
Sbjct: 15  VLFPEKIIGLHNNMCTSLNLSNLFW 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,190
Number of Sequences: 438
Number of extensions: 5012
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)