Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_L13
(893 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 50 2e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 2e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 5e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 5e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 6e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 39 7e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.002
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.23
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.40
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 1.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.7
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 50.4 bits (115), Expect = 2e-08
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +1
Query: 58 IASAAECENATSLSLMIDSLLATYDR----ESPLDSKIVVNLTLHLRHA---NIRESEST 216
I SA C + D LL+ Y+R S + +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 217 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 390
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 391 VSNNGSVSW 417
+ G V W
Sbjct: 127 LHYTGKVLW 135
Score = 26.6 bits (56), Expect = 0.31
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 470 PNDMQTCTFKFGSRMHNSDQMD 535
P D QTC KFGS ++ Q+D
Sbjct: 153 PFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 29/113 (25%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Frame = +1
Query: 103 MIDSLLATYDR-ESPLDSK---IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 267
+++ LL++Y+ E P+ ++ + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 268 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 420
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 26.6 bits (56), Expect = 0.31
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 470 PNDMQTCTFKFGSRMHNSDQMDXVI 544
P D Q C KFGS ++ +Q+D V+
Sbjct: 187 PFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 29/113 (25%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Frame = +1
Query: 103 MIDSLLATYDR-ESPLDSK---IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 267
+++ LL++Y+ E P+ ++ + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 268 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 420
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 26.6 bits (56), Expect = 0.31
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 470 PNDMQTCTFKFGSRMHNSDQMDXVI 544
P D Q C KFGS ++ +Q+D V+
Sbjct: 187 PFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 47.6 bits (108), Expect = 2e-07
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 DRESPLDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLV 306
+ PL+ K + L + ++ E + A L++ W+D L WN E+ G +
Sbjct: 7 NESEPLEVKFGITLQQII---DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRI 63
Query: 307 SSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 420
+ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 64 TPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYV 102
Score = 26.6 bits (56), Expect = 0.31
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 470 PNDMQTCTFKFGSRMHNSDQMDXVI 544
P D Q C KFGS ++ +Q+D V+
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVL 143
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 46.0 bits (104), Expect = 5e-07
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Frame = +1
Query: 34 YXFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPLDSK---IVVNLTLHLRHA-NI 198
+ + A+A++ + +++ LL TY+ E P+ ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 199 RESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD 372
E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 373 YALRARVSNNGSVSWI 420
Y V NNG+ ++
Sbjct: 124 YPTNVVVKNNGTCLYV 139
Score = 23.8 bits (49), Expect = 2.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 470 PNDMQTCTFKFGSRMHNSDQMD 535
P D Q C KFGS ++ Q+D
Sbjct: 156 PFDDQRCEMKFGSWTYDGFQLD 177
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.0 bits (104), Expect = 5e-07
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Frame = +1
Query: 103 MIDSLLATYDR--ESPLDSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 267
+ D LL+ Y+R +++ + + L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 268 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 417
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 27.5 bits (58), Expect = 0.17
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 452 MQLDNXPNDMQTCTFKFGSRMHNSDQMD 535
+ ++ P D Q+C KFGS +N Q+D
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 DRESPLDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLV 306
+ PL+ K + L + ++ E + A L++ W+D L WN E+ G +
Sbjct: 7 NESEPLEVKFGITLQQII---DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRI 63
Query: 307 SSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 420
+ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 64 TPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 26.6 bits (56), Expect = 0.31
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 470 PNDMQTCTFKFGSRMHNSDQMDXVI 544
P D Q C KFGS ++ +Q+D V+
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 DRESPLDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLV 306
+ PL+ K + L + ++ E + A L++ W+D L WN E+ G +
Sbjct: 7 NESEPLEVKFGITLQQII---DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRI 63
Query: 307 SSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 420
+ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 64 TPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 26.6 bits (56), Expect = 0.31
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 470 PNDMQTCTFKFGSRMHNSDQMDXVI 544
P D Q C KFGS ++ +Q+D V+
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 DRESPLDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLV 306
+ PL+ K + L + ++ E + A L++ W+D L WN E+ G +
Sbjct: 7 NESEPLEVKFGITLQQII---DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRI 63
Query: 307 SSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 420
+ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 64 TPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 26.6 bits (56), Expect = 0.31
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 470 PNDMQTCTFKFGSRMHNSDQMDXVI 544
P D Q C KFGS ++ +Q+D V+
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 DRESPLDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLV 306
+ PL+ K + L + ++ E + A L++ W+D L WN E+ G +
Sbjct: 7 NESEPLEVKFGITLQQII---DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRI 63
Query: 307 SSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 420
+ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 64 TPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 26.6 bits (56), Expect = 0.31
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 470 PNDMQTCTFKFGSRMHNSDQMDXVI 544
P D Q C KFGS ++ +Q+D V+
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 130 DRESPLDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLV 306
+ PL+ K + L + ++ E + A L++ W+D L WN E+ G +
Sbjct: 7 NESEPLEVKFGITLQQII---DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRI 63
Query: 307 SSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 420
+ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 64 TPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 26.6 bits (56), Expect = 0.31
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 470 PNDMQTCTFKFGSRMHNSDQMDXVI 544
P D Q C KFGS ++ +Q+D V+
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 45.6 bits (103), Expect = 6e-07
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Frame = +1
Query: 46 LTCAIASAAECENATSLSLMIDSLLATYDRE-SPLDS---KIVVNLTLHLRH---ANIRE 204
++C +A + + D LL+ Y+R P+ + ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 205 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 381
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 382 ----RARVSNNGSVSW 417
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
Score = 23.8 bits (49), Expect = 2.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 452 MQLDNXPNDMQTCTFKFGSRMHNSDQMD 535
+ ++ P D QTC KFGS ++ +D
Sbjct: 147 IDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.2 bits (102), Expect = 8e-07
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +1
Query: 103 MIDSLLATYDR--ESPLDSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 267
+ D LL+ Y++ +++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 268 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 417
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 25.4 bits (53), Expect = 0.71
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 452 MQLDNXPNDMQTCTFKFGSRMHNSDQMD 535
+ ++ P D QTC KFGS ++ ++D
Sbjct: 155 IDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 45.2 bits (102), Expect = 8e-07
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Frame = +1
Query: 76 CENATSLSLMIDSLLATYDR--------ESPLDSKIVVNLTLHLRHANIRESESTVRILA 231
C + D LL+ Y++ L KI + L+ L N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLS-QLIDVNLKNQIMTTNLW- 76
Query: 232 DLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNG 405
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 -VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTG 135
Query: 406 SVSW 417
V W
Sbjct: 136 RVEW 139
Score = 27.1 bits (57), Expect = 0.23
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 452 MQLDNXPNDMQTCTFKFGSRMHNSDQMD 535
+ ++ P D QTC KFGS ++ Q+D
Sbjct: 151 IDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 43.6 bits (98), Expect = 2e-06
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = +1
Query: 145 LDSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSER 318
+ K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + ++
Sbjct: 48 MTEKVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDK 107
Query: 319 LWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 420
+W+PD+VL N A G+Y +R + + NG V W+
Sbjct: 108 VWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
Score = 29.5 bits (63), Expect = 0.043
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 470 PNDMQTCTFKFGSRMHNSDQMDXVI 544
P D QTC KFGS N DQ+ +
Sbjct: 159 PFDQQTCIMKFGSWTFNGDQVSLAL 183
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +1
Query: 157 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 333
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 334 VVLLNAAATTAGDYALRAR--VSNNGSVSWI 420
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.3 bits (95), Expect = 6e-06
Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +1
Query: 103 MIDSLLATYDR--ESPLDSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 267
+ D LL+ Y++ +++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 268 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 417
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 25.8 bits (54), Expect = 0.53
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 449 SMQLDNXPNDMQTCTFKFGSRMHNSDQMD 535
S+ ++ P D+QTC K GS ++ ++D
Sbjct: 154 SIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 41.1 bits (92), Expect = 1e-05
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +1
Query: 76 CENATSLSLMIDS---LLATYDRESPLDSKIV--VNLTLHLRHANIRESESTVRILADLQ 240
C++ TS S + L YDR+ + K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 241 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 342
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 38.7 bits (86), Expect = 7e-05
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +1
Query: 82 NATSLSLMIDSLLATYDRESPLD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 249
N +++S ++D+LL YD D V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 250 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 348
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 26.6 bits (56), Expect = 0.31
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 422 SAWTLALQFSMQLDNXPNDMQTCTFKFGS 508
S T+ M L+N P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.002
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Frame = +1
Query: 91 SLSLMIDSLLATYDRES-PLDSK---IVVNLTLHLRHAN-IRESESTVRILADLQMNWID 255
++++++++LL Y+ P K VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 256 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 426
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 427 LDI 435
L I
Sbjct: 156 LTI 158
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 431 TLALQFSMQLDNXPNDMQTCTFKFGS 508
T+ + M+L N P D Q+C GS
Sbjct: 157 TIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 27.1 bits (57), Expect = 0.23
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 422 SAWTLALQFSMQLDNXPNDMQTCTFKFGSRMHNSDQM 532
S TL L +M+ ++ P+D Q C+ S H + +
Sbjct: 124 SKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.2 bits (55), Expect = 0.40
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 431 TLALQFSMQLDNXPNDMQTCTFKFGSRMHNSDQM 532
TL L +M P+D Q C + S H +D+M
Sbjct: 158 TLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEM 191
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 24.2 bits (50), Expect = 1.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 440 LQFSMQLDNXPNDMQTCTFKFGSRMHNSDQMDXVIDQ 550
L ++L+ P D+Q C F S HN M DQ
Sbjct: 140 LNCGLRLEKFPFDVQECPLIFESWTHNVLDMVLYWDQ 176
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 99 GQ*CCVFAFCRTSYSTSEEKXVTRII 22
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 300 PSAAAPFPCVPTQS 259
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,488
Number of Sequences: 438
Number of extensions: 5235
Number of successful extensions: 77
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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