Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_L06
         (899 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   3.8  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   5.0  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   5.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   5.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.6  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   8.8  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   8.8  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 80  AEKSPSSTLQILLWTDGG 133
           A+++PS +L ++ W  GG
Sbjct: 114 ADRTPSQSLPVIFWIHGG 131


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 501 LSPCLVRYIVLGTICMFIK*YTIRLCMC 418
           + PC  +Y  +G  C      TI +C+C
Sbjct: 79  IDPCASKYCGIGKECELSPNSTIAVCVC 106


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 80  AEKSPSSTLQILLWTDGG 133
           A+++PS +L ++ W  GG
Sbjct: 114 ADRTPSQSLPVIFWIHGG 131


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -2

Query: 229 HNVLFNNPRVITYRFNK 179
           H+   +NP+++TY+++K
Sbjct: 308 HDTQRDNPQILTYKYSK 324


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 116 VEFVASKTATSPPLVSHSHTSCNASKAHCCL 24
           +E V S    SPP  SHS       K+  C+
Sbjct: 461 IEEVKSPVLRSPPAFSHSRCPPEIHKSCICV 491


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 116 VEFVASKTATSPPLVSHSHTSCNASKAHCCL 24
           +E V S    SPP  SHS       K+  C+
Sbjct: 461 IEEVKSPVLRSPPAFSHSRCPPEIHKSCICV 491


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +3

Query: 303 G*NITRRSTSLWTRAWSLNTAS*RYTIPERRWSFTSTKGTYRV 431
           G + T R   L  R   LN A   YTI     + TS KGT R+
Sbjct: 462 GLDFTPRGAVL-ARFTHLNHADFSYTIVINNRNNTSMKGTVRI 503


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 324 STSLWTRAWSLNTAS*RYTIPERRWS 401
           ST+LW RA  L   + +   P + WS
Sbjct: 441 STTLWQRAHRLGIDTPKKDGPTKSWS 466


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 550 GDSGLSPPMRPTQV 509
           G++ L PP RPT++
Sbjct: 18  GNTNLDPPTRPTRL 31


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 550 GDSGLSPPMRPTQV 509
           G++ L PP RPT++
Sbjct: 19  GNTNLDPPTRPTRL 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,728
Number of Sequences: 438
Number of extensions: 5092
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)