Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_L03
(887 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 70 3e-14
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 68 1e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 66 5e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 65 7e-13
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 65 7e-13
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 65 9e-13
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 65 9e-13
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 63 4e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 63 4e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 60 4e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 60 4e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 58 8e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 55 8e-10
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 7e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 52 7e-09
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 49 5e-08
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 48 9e-08
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 47 2e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 43 4e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 39 7e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 33 0.003
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 32 0.006
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.043
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 4.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 4.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 8.6
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 69.7 bits (163), Expect = 3e-14
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Frame = +1
Query: 91 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 249
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 250 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 423
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 424 VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMD 567
+ G V W + + + ++P D QTC KFGS + ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 67.7 bits (158), Expect = 1e-13
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Frame = +1
Query: 187 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 360
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 361 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTX 528
PD+VL N A G+Y +R + + NG V W+ + ++ + ++P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 529 KFGSXMXNSDEMDFVI 576
KFGS N D++ +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 65.7 bits (153), Expect = 5e-13
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Frame = +1
Query: 109 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 267
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 268 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 441
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 442 VSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMD 567
V W + + ++++P D QTC KFGS + ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 65.3 bits (152), Expect = 7e-13
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDFVI 576
G Y V++NGS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 65.3 bits (152), Expect = 7e-13
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDFVI 576
G Y V++NGS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 64.9 bits (151), Expect = 9e-13
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDFVI 576
G Y V++NGS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 64.9 bits (151), Expect = 9e-13
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Frame = +1
Query: 136 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 294
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 295 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 459
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 460 LDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMD 567
+ + ++++P D Q+C KFGS N ++D
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 64.1 bits (149), Expect = 2e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDFVI 576
G Y V+++GS ++ + M + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 63.7 bits (148), Expect = 2e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDFVI 576
G Y V+++GS ++ + M + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDFVI 576
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 62.9 bits (146), Expect = 4e-12
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 282
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 283 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 453
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 454 KRLDISTPISMQLDHWPNDMQTCTXKFGS 540
RL I M L+++P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 62.9 bits (146), Expect = 4e-12
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Frame = +1
Query: 136 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 474
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 475 PISMQLDHWPNDMQTCTXKFGSXMXNSDEMD 567
+ ++++P D QTC KFGS + ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDFVI 576
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 399
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDFVI 576
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 61.7 bits (143), Expect = 9e-12
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Frame = +1
Query: 82 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 240
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 241 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 414
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNAD---GNYEVT 120
Query: 415 ---RARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMD 567
+A + + G V W + + ++++P D QTC KFGS + +D
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 59.7 bits (138), Expect = 4e-11
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Frame = +1
Query: 109 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 273
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 274 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 444
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 445 SWIKRLDISTPISMQLDH--WPNDMQTCTXKFGSXMXNSDEM 564
+ TP+ + DH WP D+ CT S S+E+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.7 bits (138), Expect = 4e-11
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Frame = +1
Query: 136 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 465
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 466 ISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMD 567
+ S+ ++ +P D+QTC K GS + ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 58.4 bits (135), Expect = 8e-11
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 7/167 (4%)
Frame = +1
Query: 88 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 252
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 253 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 426
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 427 SNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMD 567
NNG+ ++ + + + +P D Q C KFGS + ++D
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 56.8 bits (131), Expect = 2e-10
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Frame = +1
Query: 112 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 279
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 280 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 447
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 448 WIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDFVIGPK 585
+ + + WP D C FGS + + +E++ + K
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKK 204
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 55.2 bits (127), Expect = 8e-10
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +1
Query: 190 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 366
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 367 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGS 540
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 541 XMXNSDEMD 567
+ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 52.0 bits (119), Expect = 7e-09
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Frame = +1
Query: 124 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 288
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 289 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 459
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 460 LDISTPISMQLDHWPNDMQTCTXKFGS 540
L I M+L ++P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 52.0 bits (119), Expect = 7e-09
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Frame = +1
Query: 136 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 294
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 295 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 459
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 460 LDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDFV 573
+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 49.2 bits (112), Expect = 5e-08
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Frame = +1
Query: 136 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 294
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 295 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 459
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 460 LDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDFV 573
+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 48.4 bits (110), Expect = 9e-08
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 282
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 435
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 436 GSVSWIKRLDISTPISMQLDHWPNDMQTC 522
GS++ RL I+ M L ++P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 47.2 bits (107), Expect = 2e-07
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 282
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 435
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 436 GSVSWIKRLDISTPISMQLDHWPNDMQTC 522
GS++ RL I+ M L ++P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 42.7 bits (96), Expect = 4e-06
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +1
Query: 229 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 408
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 409 ALR---ARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGS 540
R R+S +GSV++ R + M L ++P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 38.7 bits (86), Expect = 7e-05
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Frame = +1
Query: 280 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 432
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 433 NGSVSWIKRLDISTPISMQLDHWPNDMQTC 522
+GS++ RL I+ M L ++P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 33.1 bits (72), Expect = 0.003
Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 399
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 400 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTXKFGSXMXNSDEMDF 570
+ ++ + ++ ++ ++ +L + +M+ + +P+D Q C+ S + ++ F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
Query: 571 V 573
+
Sbjct: 163 I 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 32.3 bits (70), Expect = 0.006
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +1
Query: 346 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDHWPNDMQ 516
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 517 TCTXKFGSXMXNSDEMDFVIGP 582
C + S +DEM F P
Sbjct: 176 ECKLQMESLSHTTDEMIFQWDP 197
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.5 bits (63), Expect = 0.043
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +1
Query: 190 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 351
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 352 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDHWPNDMQ 516
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 517 TC 522
C
Sbjct: 129 IC 130
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -1
Query: 518 VCMSL--GQWSNCIEIGVLMSKRF 453
+CM L G WS C++ V M + F
Sbjct: 283 ICMMLLIGHWSGCLQFLVPMLQGF 306
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -1
Query: 518 VCMSL--GQWSNCIEIGVLMSKRF 453
+CM L G WS C++ V M + F
Sbjct: 251 ICMMLLIGHWSGCLQFLVPMLQGF 274
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 333 PSAAAPLPCVPTQS 292
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 762 RGNTAPAXXXLXXGDAFPGXXIWNIAH 682
R A A GD PG I NIAH
Sbjct: 373 RARKARANRKPNLGDIKPGSIIENIAH 399
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,517
Number of Sequences: 438
Number of extensions: 4827
Number of successful extensions: 98
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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