BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_J06
(919 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y16187-1|CAA76113.1| 775|Homo sapiens metallopeptidase protein. 32 2.5
DQ114476-1|AAZ22338.1| 773|Homo sapiens endothelin converting e... 32 2.5
BC050453-1|AAH50453.2| 775|Homo sapiens endothelin converting e... 32 2.5
AJ130734-1|CAB86601.1| 775|Homo sapiens xce protein. 32 2.5
AC092165-1|AAY24101.1| 775|Homo sapiens unknown protein. 32 2.5
U17105-1|AAB60342.1| 786|Homo sapiens cyclin F protein. 32 3.4
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.4
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.4
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.4
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.4
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.4
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.4
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.4
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.4
X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein. 31 5.9
Z36714-1|CAA85308.1| 786|Homo sapiens cyclin F protein. 31 7.7
AF036977-1|AAD02090.1| 331|Homo sapiens unknown protein. 31 7.7
>Y16187-1|CAA76113.1| 775|Homo sapiens metallopeptidase protein.
Length = 775
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 467 VNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHHHPRIPYTNHPRLNIHFHQS 634
VN T + +GGL L + A W R H P+H PR+ YT+ I F Q+
Sbjct: 664 VNGKHTLGENIADMGGLKLAYHAYQKW-VREHGPEHPLPRLKYTHDQLFFIAFAQN 718
>DQ114476-1|AAZ22338.1| 773|Homo sapiens endothelin converting
enzyme-like 1 protein.
Length = 773
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 467 VNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHHHPRIPYTNHPRLNIHFHQS 634
VN T + +GGL L + A W R H P+H PR+ YT+ I F Q+
Sbjct: 662 VNGKHTLGENIADMGGLKLAYHAYQKW-VREHGPEHPLPRLKYTHDQLFFIAFAQN 716
>BC050453-1|AAH50453.2| 775|Homo sapiens endothelin converting
enzyme-like 1 protein.
Length = 775
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 467 VNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHHHPRIPYTNHPRLNIHFHQS 634
VN T + +GGL L + A W R H P+H PR+ YT+ I F Q+
Sbjct: 664 VNGKHTLGENIADMGGLKLAYHAYQKW-VREHGPEHPLPRLKYTHDQLFFIAFAQN 718
>AJ130734-1|CAB86601.1| 775|Homo sapiens xce protein.
Length = 775
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 467 VNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHHHPRIPYTNHPRLNIHFHQS 634
VN T + +GGL L + A W R H P+H PR+ YT+ I F Q+
Sbjct: 664 VNGKHTLGENIADMGGLKLAYHAYQKW-VREHGPEHPLPRLKYTHDQLFFIAFAQN 718
>AC092165-1|AAY24101.1| 775|Homo sapiens unknown protein.
Length = 775
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 467 VNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHHHPRIPYTNHPRLNIHFHQS 634
VN T + +GGL L + A W R H P+H PR+ YT+ I F Q+
Sbjct: 664 VNGKHTLGENIADMGGLKLAYHAYQKW-VREHGPEHPLPRLKYTHDQLFFIAFAQN 718
>U17105-1|AAB60342.1| 786|Homo sapiens cyclin F protein.
Length = 786
Score = 31.9 bits (69), Expect = 3.4
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 344 KGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAL 523
KG +D + L+ + P+ P K P+ DVT G + ++T SS+ GGL
Sbjct: 663 KGPQDPQALALDTQI-PATPGPK-PLVRTSREPGKDVTTSGYSSVSTASSTSSVDGGLGA 720
Query: 524 MHQAT--LPWRSRLH-QPDHHHPR 586
+ Q T L S H QP HH R
Sbjct: 721 LPQPTSVLSLDSDSHTQPCHHQAR 744
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein.
Length = 341
Score = 31.1 bits (67), Expect = 5.9
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 636 LTPYXKEFAPGLKPPVSSEAPSAYLTPSHWAW 731
L P PGL+P V + P + PS W W
Sbjct: 130 LEPLYSASGPGLRPLVIKQEPRGRMKPSSWRW 161
>Z36714-1|CAA85308.1| 786|Homo sapiens cyclin F protein.
Length = 786
Score = 30.7 bits (66), Expect = 7.7
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +2
Query: 344 KGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAL 523
KG +D + L+ + P+ P K P+ DVT G + ++T S + GGL
Sbjct: 663 KGPQDPQALALDTQI-PATPGPK-PLVRTSREPGKDVTTSGYSSVSTASPTSSVDGGLGA 720
Query: 524 MHQAT--LPWRSRLH-QPDHHHPR 586
+ Q T L S H QP HH R
Sbjct: 721 LPQPTSVLSLHSDSHTQPCHHQAR 744
>AF036977-1|AAD02090.1| 331|Homo sapiens unknown protein.
Length = 331
Score = 30.7 bits (66), Expect = 7.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 644 VLXGVRAGVKASGVIRGSISVSHPLALGMAKGVRP 748
V G AG++A+G G + + ++LG +G+RP
Sbjct: 79 VAHGEEAGIRAAGPGHGGVEIPQGVSLGARRGLRP 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,801,968
Number of Sequences: 237096
Number of extensions: 2784363
Number of successful extensions: 5771
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5758
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -