Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_I16
(906 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 7e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 49 5e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 2e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 44 3e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 42 6e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 37 3e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 36 5e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.002
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.95
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 3.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.1
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 6.7
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.0 bits (119), Expect = 7e-09
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +3
Query: 96 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLGHA---NIRESEST 254
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 255 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 428
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 429 VSNNGSVSW 455
+ G V W
Sbjct: 127 LHYTGKVLW 135
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 49.2 bits (112), Expect = 5e-08
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKIVVNLTLHLG-------HANIRESESTVRIQADLQMNWIDKR 299
+ D LL+ Y+R P LT+ LG N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 300 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWI 458
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWI 458
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWI 458
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 47.6 bits (108), Expect = 2e-07
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Frame = +3
Query: 84 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLGH---ANIRE 242
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 243 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 419
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 420 ----RARVSNNGSVSW 455
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 46.8 bits (106), Expect = 3e-07
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLGHANIRESESTVRIQADLQ 278
C++ TS S + L YDRD P+ K ++ L + H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 380
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 46.4 bits (105), Expect = 4e-07
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Frame = +3
Query: 114 CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLGH---ANIRESESTVRIQAD 272
C + D LL+ Y++ P + V + L L N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 446
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 447 VSW 455
V W
Sbjct: 137 VEW 139
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWI 458
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWI 458
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWI 458
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWI 458
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWI 458
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = +3
Query: 195 IVVNLTLHLGHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 368
+V L+LH H ++ E + + W D L WNA E+ G V R+WRP
Sbjct: 33 VVFGLSLH--HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRP 90
Query: 369 DVVLLNAAATTAGDYALRAR--VSNNGSVSWI 458
D +L N A + VS+ G V W+
Sbjct: 91 DTILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.0 bits (99), Expect = 2e-06
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 7/129 (5%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLGHA-----NIRESESTV 257
A+A++ + +++ LL TY+ P L L G ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 258 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 431
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 432 SNNGSVSWI 458
NNG+ ++
Sbjct: 131 KNNGTCLYV 139
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.6 bits (98), Expect = 3e-06
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 446
++ +W D +L W E+G L V S+ +WRPD+VL NA A +A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 447 VSW 455
V W
Sbjct: 141 VEW 143
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 43.2 bits (97), Expect = 3e-06
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG 407
N+ E ++ L+ W D +L W+ ++ G + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 121
Query: 408 DYALRAR----VSNNGSVSWI 458
+Y +R + + NG V W+
Sbjct: 122 NYEVRYKSNVLIYPNGDVLWV 142
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 42.3 bits (95), Expect = 6e-06
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD-----SKIVVNLTLHLGHANIRESESTVRIQADLQMN 284
N +++S ++D+LL YD PD + + V++ + I E + T + + +
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVR-SMGPISEVDMTYSMDCYFRQS 60
Query: 285 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 386
W+D+RL++ G+ + + R+W+PD N
Sbjct: 61 WVDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 40.7 bits (91), Expect = 2e-05
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 437
++ +W D +L W E+G L V S+ +WRPD+VL N A G+Y + +A V
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYY 137
Query: 438 NGSVSW 455
+G V W
Sbjct: 138 SGLVVW 143
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 36.7 bits (81), Expect = 3e-04
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +3
Query: 117 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHLGHANIRESE--STVRIQADLQMN 284
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 285 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 452
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 453 WI 458
+
Sbjct: 159 CV 160
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 35.9 bits (79), Expect = 5e-04
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Frame = +3
Query: 63 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLG 224
++LL FLL + + + ++D++L YD P D +V + L +
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 225 H-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 395
A I + + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 396 TTAGDYAL---RARVSNNGSVSWIKRLDIS 476
+ + R+ NGSV + R+ ++
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLT 157
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.002
Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Frame = +3
Query: 129 SLSLMIDSLLATYDRDSPPDS-----KIVVNLTLHLGHANIRESESTVRIQADLQMNWID 293
++++++++LL Y+ + P +V L + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 294 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 464
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 465 LDI 473
L I
Sbjct: 156 LTI 158
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.95
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 60 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 164
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.0 bits (47), Expect = 3.8
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +3
Query: 195 IVVNLTLHLGHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 356
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 357 LWRPDVVLLNA 389
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 338 PSAAAPLPCVPTQS 297
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 6.7
Identities = 21/85 (24%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Frame = +3
Query: 165 YDRDSPP----DSKIVVNLTLHLGHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCS 332
YD+ PP + +V +G +I E+ T W D RL
Sbjct: 48 YDKMRPPKKDGQATVVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSEY 107
Query: 333 TWLVSS--ERLWRPDVVLLNAAATT 401
L + +WRPD NA + T
Sbjct: 108 RLLEVDWLKNMWRPDSFFKNAKSVT 132
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,407
Number of Sequences: 438
Number of extensions: 3779
Number of successful extensions: 56
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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