Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_I14
(868 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 64 2e-12
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 63 3e-12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 63 4e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 62 5e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 62 5e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 62 6e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 62 9e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 6e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 50 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 50 3e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 48 1e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 46 6e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 44 1e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 42 6e-06
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 37 3e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 37 3e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 37 3e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 3e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 4e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.003
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 32 0.006
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 32 0.008
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.22
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 64.1 bits (149), Expect = 2e-12
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 9/172 (5%)
Frame = +3
Query: 84 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 242
+ D LL+ Y+R P S +VV L L L N+++ T + L+ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 81
Query: 243 LSWNAGEWGCNTWL-VSSERLWRPDVVLLNAAAXTAGDYAL-RARVSNNGSVSWIKRLDI 416
W+ E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 82 FQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIF 141
Query: 417 TTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVXDXXXYSMFDXRSVGCD 572
+ + + +P D QTC KFGS ++ +D +M D +G D
Sbjct: 142 KSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQIDL--KHINQNMGDKVEIGID 191
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 63.3 bits (147), Expect = 3e-12
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +3
Query: 51 QNAENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADL 218
+N ++ T+L + L YD P S +I N+T+ L + + S + + + +
Sbjct: 36 KNYDHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWM 95
Query: 219 QMNWIDKRLSWNAGEW-GCNTWLVSSERLWRPDVVLLNAAAXT---AGDYALRARVSNNG 386
+ W D LSW ++ G N V S+ +W PD+ + N+ T G V ++G
Sbjct: 96 TLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSG 155
Query: 387 SVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVXDXXXYSM 545
SVS + + + +WP D C FGS +H+ + ++ D + M
Sbjct: 156 SVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 62.9 bits (146), Expect = 4e-12
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Frame = +3
Query: 84 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 248
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 249 WNAGEWGCNTWL-VSSERLWRPDVVLLNAAAXTAGDYAL----RARVSNNGSVSWIKRLD 413
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 414 ITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 515
+ + ++ +P D Q+C KFGS +N +D
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 62.5 bits (145), Expect = 5e-12
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Frame = +3
Query: 84 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 248
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 249 WNAGEWG-CNTWLVSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGSVSWIKRLDITT 422
WN E+G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 423 PISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
+ + +P D Q C KFGS ++ + +D V
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 210
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 62.5 bits (145), Expect = 5e-12
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Frame = +3
Query: 84 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 248
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 249 WNAGEWG-CNTWLVSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGSVSWIKRLDITT 422
WN E+G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 423 PISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
+ + +P D Q C KFGS ++ + +D V
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 210
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 62.1 bits (144), Expect = 6e-12
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Frame = +3
Query: 135 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CNTWLVSSERLWR 308
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 309 PDVVLLNAAAXTAGDYALRAR----VSNNGSVSWIKRLDITTPISMQLDNWPNDMQTCTF 476
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 477 KFGSRMHNSD 506
KFGS N D
Sbjct: 168 KFGSWTFNGD 177
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 61.7 bits (143), Expect = 9e-12
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CNTWLVSSERLWRPDVVLLNAA-AXTA 347
++ E + A L++ W+D L WN E+G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
G Y V++NGS ++ + + + +P D Q C KFGS ++ + +D V
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 61.7 bits (143), Expect = 9e-12
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +3
Query: 63 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 230
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 231 IDKRLSWNAGEWGCNTWLVSSERLWRPDVVLLNAA---AXTAGDYALRARVSNNGSVSWI 401
+D+RL++ G+ + R+W+PD N T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 402 KRLDITTPISMQLDNWPNDMQTCTFKFGS 488
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.7 bits (143), Expect = 9e-12
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Frame = +3
Query: 84 MIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILADLQMNWIDKR 242
+ D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +
Sbjct: 28 LYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 85
Query: 243 LSWNAGEWGCNTWL-VSSERLWRPDVVLLNAAAXTAG-DYALRARVSNNGSVSWIKRLDI 416
L W+ E+G L V S+ +WRPD+VL N A A +A ++ G V W
Sbjct: 86 LKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIY 145
Query: 417 TTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 515
+ + ++ +P D QTC KFGS ++ +D
Sbjct: 146 KSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Frame = +3
Query: 84 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 248
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 249 WNAGEWGCNTWL-VSSERLWRPDVVLLNAAAXTAG-DYALRARVSNNGSVSWIKRLDITT 422
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 423 PISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 515
+ ++ +P D QTC KFGS ++ +D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 60.9 bits (141), Expect = 1e-11
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CNTWLVSSERLWRPDVVLLNAA-AXTA 347
++ E + A L++ W+D L WN E+G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
G Y V+++GS ++ + M + +P D Q C KFGS ++ + +D V
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CNTWLVSSERLWRPDVVLLNAA-AXTA 347
++ E + A L++ W+D L WN E+G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
G Y V+++GS ++ + M + +P D Q C KFGS ++ + +D V
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 59.7 bits (138), Expect = 3e-11
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CNTWLVSSERLWRPDVVLLNAA-AXTA 347
++ E + A L++ W+D L WN E+G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
G Y V+++GS ++ + + + +P D Q C KFGS ++ + +D V
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 59.7 bits (138), Expect = 3e-11
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Frame = +3
Query: 84 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 242
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 81
Query: 243 LSWNAGEWG-CNTWLVSSERLWRPDVVLLNAAAXTAGDYAL----RARVSNNGSVSWIKR 407
L WN ++G +T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPP 138
Query: 408 LDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 515
+ + ++ +P D QTC KFGS ++ +D
Sbjct: 139 AIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCNTWLVSSERLWRPDVVLLNAA-AXTA 347
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
G Y V+++GS ++ + + + +P D Q C KFGS ++ + +D V
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.3 bits (137), Expect = 5e-11
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Frame = +3
Query: 84 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 248
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 249 WNAGEWGCNTWL-VSSERLWRPDVVLLNAAAXTAGDYAL----RARVSNNGSVSWIKRLD 413
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 414 ITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 515
+ S+ ++ +P D+QTC K GS ++ +D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +3
Query: 174 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCNTWLVSSERLWRPDVVLLNAA-AXTA 347
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 348 GDYALRARVSNNGSVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
G Y V+++GS ++ + + + +P D Q C KFGS ++ + +D V
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 56.8 bits (131), Expect = 2e-10
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Frame = +3
Query: 96 LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 266
L YDR+ P+ K ++ L ++H N+ E TV L++ W L+W + E+
Sbjct: 44 LFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFD 103
Query: 267 GCNTWLVSSERLWRPDVVL--LNAAAXTAGDYALRARVSNNGSVSWIKRLDITTPISMQL 440
N+ V S +W PD+V+ + + ++ V N+G++ + T
Sbjct: 104 SINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDH 163
Query: 441 DNWPNDMQTCTFKFGSRMHNSD 506
WP D+ CT S H S+
Sbjct: 164 TWWPYDILNCTIHIASWSHGSN 185
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 55.6 bits (128), Expect = 6e-10
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +3
Query: 216 LQMNWIDKRLSWNAGEWG-CNTWLVSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGS 389
L++ W D + WN ++G + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 390 VSWIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 515
++ + + + +P D Q C KFGS ++ +D
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 53.6 bits (123), Expect = 2e-09
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +3
Query: 138 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCNTWLVSSERLWRPD 314
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 315 VVLLNAAAXTAGDYALRARV--SNNGSVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGS 488
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 50.4 bits (115), Expect = 2e-08
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Frame = +3
Query: 84 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 242
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 243 LSWN--AGEWGCNTWLVSSERLWRPDVVLLNAAAXTAGDYALR---ARVSNNGSVSWIKR 407
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 408 LDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
+ +T M L +P D Q C+ + S +D + F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 50.0 bits (114), Expect = 3e-08
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +3
Query: 72 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 236
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 237 KRLSWNAGEWGCNTWLVSSERLWRPDVVLLNAAAXTAGDYALR---ARVSNNGSVSWIKR 407
RLS+ + + ER+WRPD N + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 408 LDITTPISMQLDNWPNDMQTCTFKFGS 488
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.6 bits (108), Expect = 1e-07
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Frame = +3
Query: 84 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 242
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 243 LSWN--AGEWGCNTWLVSSERLWRPDVVLLNAAAXTAGDYALR---ARVSNNGSVSWIKR 407
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 408 LDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
+ +T M L +P D Q C+ + S +D + F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.6 bits (103), Expect = 6e-07
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 63 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 230
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 231 IDKRLSWNAGEWGCNTWLVSSE---RLWRPDVVLLNAA------AXTAGDYALRARVSNN 383
D RL++ G T V SE +W PD +N A T+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 384 GSVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGS 488
GS++ RL IT M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.4 bits (100), Expect = 1e-06
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +3
Query: 63 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 230
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 231 IDKRLSWNAGEWGCNTWLVSSE---RLWRPDVVLLNAA------AXTAGDYALRARVSNN 383
D RL++ G T V SE +W PD +N A T+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 384 GSVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGS 488
GS++ RL IT M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 42.3 bits (95), Expect = 6e-06
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 7/151 (4%)
Frame = +3
Query: 57 AENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQM 224
++ +++ I +L YD P+ ++V + L + + I E I L
Sbjct: 31 SDRLENVTQTISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQ 90
Query: 225 NWIDKRLSWNAGEWGCNTWLVSSERLWRPDVVLLNAAAXTAGDYALR---ARVSNNGSVS 395
W D+RL+++ E +E++W PD N D R R+S +GSV+
Sbjct: 91 YWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVT 150
Query: 396 WIKRLDITTPISMQLDNWPNDMQTCTFKFGS 488
+ R T M L +P D Q CT + S
Sbjct: 151 YGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 36.7 bits (81), Expect = 3e-04
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Frame = +3
Query: 60 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 224
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 225 NWIDKRLSW-NAGEWGCNTWLVSSERLWRPDV--VLLNAAAXTAGDYALRARVSNNGSVS 395
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 396 WIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 36.7 bits (81), Expect = 3e-04
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Frame = +3
Query: 60 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 224
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 225 NWIDKRLSW-NAGEWGCNTWLVSSERLWRPDV--VLLNAAAXTAGDYALRARVSNNGSVS 395
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 396 WIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 36.7 bits (81), Expect = 3e-04
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Frame = +3
Query: 60 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 224
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 225 NWIDKRLSW-NAGEWGCNTWLVSSERLWRPDV--VLLNAAAXTAGDYALRARVSNNGSVS 395
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 396 WIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.7 bits (81), Expect = 3e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +3
Query: 228 WIDKRLSWNAGEWGCNTWLVSSE---RLWRPDVVLLNAA------AXTAGDYALRARVSN 380
W D RL++ G T V SE +W PD +N A T+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 381 NGSVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGS 488
+GS++ RL IT M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.3 bits (80), Expect = 4e-04
Identities = 35/165 (21%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Frame = +3
Query: 60 ENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE----SESTVRILAD--LQ 221
E++ SL ++ YD+ P K + T+ H + +E ++ +AD L
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAP--KFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLA 58
Query: 222 MNWIDKRLSW--NAGEWGCNTWLVSSERLWRPDVVLLNAAAXTAGDYALRAR---VSNNG 386
+W D RL N E + +WRPD NA T + ++ + ++
Sbjct: 59 QSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDK 118
Query: 387 SVSWIKRLDITTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 521
++ ++ +L + +M+ +++P+D Q C+ S H + + F+
Sbjct: 119 TLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.003
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +3
Query: 294 ERLWRPDVVLLNAAAXTAGDYALRAR---VSNNGSVSWIKRLDITTPISMQLDNWPNDMQ 464
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 465 TCTFKFGSRMHNSDXMDFVXD 527
C + S H +D M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 32.3 bits (70), Expect = 0.006
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 300 LWRPDVVLLN--AAAXTAGDYA-LRARVSNNGSVSWIKRLDITTPISMQLDNWPNDMQTC 470
+W P V + N ++A T + + + +G V RL T ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 471 TFKFGSRMHN 500
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.9 bits (69), Expect = 0.008
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
Frame = +3
Query: 138 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCNTWLVSSERLWRP 311
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 312 DV--VLLNAAAXTAGDYALRARVSNNGSVSWIKRLDITTPISMQLDNWPNDMQTCTFKFG 485
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 486 SRMHNSDXMDFV 521
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.1 bits (57), Expect = 0.22
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 294 ERLWRPDVVLLNAAAXTAGDYALRARVSN-----NGSVSWIKRLDITTPISMQLDNWPND 458
+ LW+PD LNA AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 459 MQTC 470
+Q C
Sbjct: 127 IQIC 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,221
Number of Sequences: 438
Number of extensions: 4810
Number of successful extensions: 89
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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