Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_H11
(921 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 50 4e-08
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 50 4e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 48 1e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 48 2e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 48 2e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 48 2e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 48 2e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 46 6e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 6e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 45 8e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 44 1e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 43 3e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 41 2e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 39 7e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 2.2
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 3.0
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 23 3.9
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 6.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.8
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.0 bits (114), Expect = 3e-08
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLN-AXATTA 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 385 GDYALRVRVSNNGSVSWI 438
G Y V V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.0 bits (114), Expect = 3e-08
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLN-AXATTA 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 385 GDYALRVRVSNNGSVSWI 438
G Y V V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 49.6 bits (113), Expect = 4e-08
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLN-AXATTA 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRVRVSNNGSVSWI 438
G Y V V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 49.6 bits (113), Expect = 4e-08
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Frame = +1
Query: 76 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 234
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 235 VRIQADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLN 366
+ L+ W D + W+ E+G T L V SE +W PD+VL N
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYN 111
Score = 22.6 bits (46), Expect = 5.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 489 PNDMXTCTFKFGSRMHNXDEMD 554
P D TC KFGS ++ ++D
Sbjct: 153 PFDQQTCFMKFGSWTYDGIQID 174
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 258
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLSWNAGEW-GXSTWLVSSERLWRPDVVL 360
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 48.0 bits (109), Expect = 1e-07
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Frame = +1
Query: 55 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-N 213
R+ L AIA AA + +++ LL TY+ P +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 214 IRESESTVRIQADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLN-AXATTAG 387
+ E + L++ W D + WN ++G L + RLW+PDV++ N A G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDG 122
Query: 388 DYALRVRVSNNGSVSWI 438
Y V V NNG+ ++
Sbjct: 123 TYPTNVVVKNNGTCLYV 139
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 47.6 bits (108), Expect = 2e-07
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLN-AXATTA 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRVRVSNNGSVSWI 438
G Y V V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 47.6 bits (108), Expect = 2e-07
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLN-AXATTA 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRVRVSNNGSVSWI 438
G Y V V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 47.6 bits (108), Expect = 2e-07
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLN-AXATTA 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRVRVSNNGSVSWI 438
G Y V V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 47.6 bits (108), Expect = 2e-07
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLN-AXATTA 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRVRVSNNGSVSWI 438
G Y V V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 47.6 bits (108), Expect = 2e-07
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLN-AXATTA 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRVRVSNNGSVSWI 438
G Y V V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 46.8 bits (106), Expect = 3e-07
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Frame = +1
Query: 94 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 252
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 253 LQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLL-NAXATTAGDYALRVRVSNNGS 426
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A + ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 427 VSW 435
V W
Sbjct: 137 VEW 139
Score = 22.6 bits (46), Expect = 5.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 489 PNDMXTCTFKFGSRMHNXDEMD 554
P D TC KFGS ++ ++D
Sbjct: 157 PFDEQTCVMKFGSWTYDGFQVD 178
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 46.0 bits (104), Expect = 5e-07
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWR 345
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 346 PDVVLL-NAXATTAGDYALRVRVSNNGSVSWI 438
PD+VL NA Y V + NG V W+
Sbjct: 111 PDIVLFNNADGNYEVRYKSNVLIYPNGDVLWV 142
Score = 29.9 bits (64), Expect = 0.034
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = +3
Query: 480 TIXPNDMXTCTFKFGSRMHNXDEMDFVI--DKRIYSM---FESGXWD 605
T P D TC KFGS N D++ + +K + ++SG WD
Sbjct: 156 TYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWD 202
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 45.6 bits (103), Expect = 6e-07
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 267
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 268 IDKRLSWNAGEWGXSTWLVSSERLWRPDVVLLNAXAT---TAGDYALRVRVSNNGSVSWI 438
+D+RL++ G+ + + R+W+PD N + T VR+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 439 KRLDI 453
RL I
Sbjct: 122 SRLTI 126
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 45.6 bits (103), Expect = 6e-07
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 9/133 (6%)
Frame = +1
Query: 64 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 222
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 223 SESTVRIQADLQMNWIDKRLSWNAGEWGX-STWLVSSERLWRPDVVLL-NAXATTAGDYA 396
T + ++ W D +L WN ++G T V SE +W PD+VL NA
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 122
Query: 397 LRVRVSNNGSVSW 435
+ + + G V W
Sbjct: 123 TKAILHHTGKVVW 135
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 45.2 bits (102), Expect = 8e-07
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Frame = +1
Query: 121 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 279
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 280 LSWNAGEWGXSTWL-VSSERLWRPDVVLL-NAXATTAGDYALRVRVSNNGSVSW 435
L WN E+G L V SE +W PD+VL NA + + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGDVSW 148
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.4 bits (100), Expect = 1e-06
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGXSTWL-VSSERLWRPDVVLL-NAXATTAGDYALRVRVSNNGSVSW 435
W E+G L V S+ +WRPD+VL NA A + + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 489 PNDMXTCTFKFGSRMHNXDEMD 554
P D TC KFGS ++ ++D
Sbjct: 161 PFDEQTCVLKFGSWTYDGFKVD 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +1
Query: 175 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GXSTWLVSSERLWRPD 351
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 352 VVLLNAXATTAGDYAL--RVRVSNNGSVSWI 438
+L N + V VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.1 bits (92), Expect = 1e-05
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGXSTWL-VSSERLWRPDVVLL-NAXATTAGDYALRVRVSNNGSVSW 435
W E+G L V S+ +WRPD+VL NA + V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGLVVW 143
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 40.7 bits (91), Expect = 2e-05
Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 8/132 (6%)
Frame = +1
Query: 109 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 273
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 274 KRLSWNAGEWGXSTWLVSSERLWRPDVVLLNAXATTAGDYAL---RVRVSNNGSVSWIKR 444
RLS+ S + ER+WRPD N + + +R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 445 LDIXTPISMQFR 480
L I M+ R
Sbjct: 156 LTIKAKCPMELR 167
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 38.7 bits (86), Expect = 7e-05
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 279
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 280 LSWN--AGEWGXSTWLVSSERLWRPDVVLLNAXATTAGDYAL---RVRVSNNGSVSWIKR 444
L +N G T L + R+W PD+ N + + +R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 445 --LDIXTPISMQFRQXGPTTCXLARSS 519
L + P++++ C L +S
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 37.5 bits (83), Expect = 2e-04
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +1
Query: 97 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 264
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 265 WIDKRLSWNAGEW-GXSTWLVSSERLWRPDVVLLNAXATT---AGDYALRVRVSNNGSVS 432
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 433 WI 438
+
Sbjct: 159 CV 160
Score = 29.9 bits (64), Expect = 0.034
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 489 PNDMXTCTFKFGSRMHNXDEMDFVIDKRIYSM 584
P D C FGS +H+ +E++ +DK+ + M
Sbjct: 177 PYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.8 bits (49), Expect = 2.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 483 IXPNDMXTCTFKFGSRMHNXDEMDFVID 566
I P+D C + S H DEM F D
Sbjct: 169 IYPHDTQECKLQMESLSHTTDEMIFQWD 196
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.4 bits (48), Expect = 3.0
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 9/111 (8%)
Frame = +1
Query: 175 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWN--AGEWGXSTWLVSSE---R 336
++V+ + + N I + R+ ++ +WI+ RL E G + E
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 337 LWRPDVVLLNAXAT--TAGDYAL-RVRVSNNGSVSWIKRLDIXTPISMQFR 480
LW+PD LNA + A ++ V + N +V + R+ M+F+
Sbjct: 71 LWQPDPYFLNAKVSEIAALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQ 121
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 23.0 bits (47), Expect = 3.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 448 DIXTPISMQFRQXGPTTC 501
DI +P ++++ GPTTC
Sbjct: 356 DISSPDAVEYGIIGPTTC 373
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 325 TPAKCXSPTPLRSNSVVCRSNSFED 251
TP + + PL + V CR+N E+
Sbjct: 26 TPRRKKNKKPLPTECVFCRNNGEEE 50
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 6.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 318 PSAXAPLPCVPTQS 277
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,676
Number of Sequences: 438
Number of extensions: 4429
Number of successful extensions: 62
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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