Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_G24
(907 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.033
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.033
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.033
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.033
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.033
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.033
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.033
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.033
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.033
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.044
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.058
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 28 0.13
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.23
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.23
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 26 0.41
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.95
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 25 0.95
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 24 2.2
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 23 5.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 5.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.1
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.033
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVLLXAA 389
L++ W+D L WN E+G L ++ +L P +++ +A
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.033
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVLLXAA 389
L++ W+D L WN E+G L ++ +L P +++ +A
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.033
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVLLXAA 389
L++ W+D L WN E+G L ++ +L P +++ +A
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.033
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVLLXAA 389
L++ W+D L WN E+G L ++ +L P +++ +A
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.033
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVLLXAA 389
L++ W+D L WN E+G L ++ +L P +++ +A
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.033
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVLLXAA 389
L++ W+D L WN E+G L ++ +L P +++ +A
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.033
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVLLXAA 389
L++ W+D L WN E+G L ++ +L P +++ +A
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.033
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVLLXAA 389
L++ W+D L WN E+G L ++ +L P +++ +A
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.9 bits (64), Expect = 0.033
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVL 377
++ W D +L WN E+G L V SE + P +VL
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVL 122
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.5 bits (63), Expect = 0.044
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVL 377
L+ W D + W+ E+G T L V SE + P +VL
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVL 109
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.058
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEW-GCXTWLVSSERLXXPXVVL 377
++ W D +L WN ++ G T V SE + P +VL
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVL 109
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.9 bits (59), Expect = 0.13
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVL 377
++ +W D +L W+ E+G L V S+ + P +VL
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVL 113
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.1 bits (57), Expect = 0.23
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVL 377
++ +W D +L W E+G L V S+ + P +VL
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVL 117
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.1 bits (57), Expect = 0.23
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVL 377
++ +W D +L W E+G L V S+ + P +VL
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVL 117
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 26.2 bits (55), Expect = 0.41
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVLLXAA 389
L++ W D + WN ++G L + RL P V++ +A
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.95
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 56 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 160
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.95
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +3
Query: 282 WIDKRLSWNAGEW-GCXTWLVSSERLXXPXVVL 377
W D L WNA E+ G V R+ P +L
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTIL 94
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.8 bits (49), Expect = 2.2
Identities = 11/60 (18%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 222 MLTFVSPXSTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVLLXAAXTT 398
++ F S + + + + + W D LSW ++ ++ V S+ + P + + + T
Sbjct: 79 LMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMT 138
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 22.6 bits (46), Expect = 5.1
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 372 PRXASTSVPRT-PAKCXSPTPLRSNSVVCRSNSFED 268
P + ++P T P + + PL + V CR+N E+
Sbjct: 15 PDLDNVTMPETTPRRKKNKKPLPTECVFCRNNGEEE 50
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 5.1
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLXXPXVVLLXAA 389
L+ W D +L W+ ++G L + +++ P +VL A
Sbjct: 79 LRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA 119
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 335 PSAAAPLPCVPTQS 294
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,782
Number of Sequences: 438
Number of extensions: 3140
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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