Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_G21
(861 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 36 6e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 35 0.001
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.003
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 31 0.014
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.014
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.014
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 31 0.018
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.018
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 30 0.024
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.055
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.055
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.073
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 29 0.073
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 29 0.073
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 29 0.073
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 28 0.096
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 27 0.17
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.22
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 27 0.22
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 26 0.39
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 26 0.39
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 26 0.51
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 3.6
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 35.5 bits (78), Expect = 6e-04
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWXNDMQ 502
ER+WRPD N + + R+S +G + RL I M+L N+ D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 503 TC 508
+C
Sbjct: 175 SC 176
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.001
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANXRESESTVRIQADLQ 258
C++ TS S + L YDRD P+ K ++ L ++H N E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLSWNA 294
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 33.1 bits (72), Expect = 0.003
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHANX-RESESTVRIQADLQMNW 267
N +++S ++D+LL YD PD V + + +R E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 268 IDKRLSWNAGR 300
+D+RL++ G+
Sbjct: 62 VDRRLAFQGGK 72
Score = 30.3 bits (65), Expect = 0.024
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +2
Query: 335 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWXNDMQT 505
R+W+PD N + T R+ +G V RL I M L+N+ D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 506 CTXQ 517
C Q
Sbjct: 144 CPLQ 147
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 31.1 bits (67), Expect = 0.014
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 329 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWXNDM 499
+E++W PD N + D R R+S +GSV+ R + M L + D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 500 QTCTXQ 517
Q CT +
Sbjct: 173 QNCTVE 178
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.1 bits (67), Expect = 0.014
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +2
Query: 305 GCSIWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISM 472
G + V S+ +WRPD+VL N A G+Y + +A V +G V + S+
Sbjct: 99 GVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSI 155
Query: 473 QLDNWXNDMQTC 508
++ + D+QTC
Sbjct: 156 DVEFFPYDVQTC 167
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.1 bits (67), Expect = 0.014
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 GCSIWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLD 481
G + V S+ +WRPD+VL NA A +A + + G V + + ++
Sbjct: 99 GVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVE 158
Query: 482 NWXNDMQTC 508
+ D QTC
Sbjct: 159 YFPFDEQTC 167
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 30.7 bits (66), Expect = 0.018
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 305 GCSIWLVSSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPISM 472
G + + +++W+PD+VL N A G+Y +R + + NG V + + ++
Sbjct: 97 GIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTI 153
Query: 473 QLDNWXNDMQTC 508
+ + D QTC
Sbjct: 154 DVTYFPFDQQTC 165
Score = 21.8 bits (44), Expect = 8.4
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANXRESESTVRIQADLQMNWIDKRLSWNAGRVG 306
K+ VN L ++ N E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 30.7 bits (66), Expect = 0.018
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 GCSIWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLD 481
G + V S+ +WRPD+VL NA A +A ++ G V + + ++
Sbjct: 95 GVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVE 154
Query: 482 NWXNDMQTC 508
+ D QTC
Sbjct: 155 YFPFDEQTC 163
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 30.3 bits (65), Expect = 0.024
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 427
+ RLW+PDV++ N+A G Y V NNG+
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.055
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 427
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 220 ESESTVRIQADLQMNWIDKRLSWNAGRVG 306
E + A L++ W+D L WN G
Sbjct: 96 EKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.055
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 427
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 220 ESESTVRIQADLQMNWIDKRLSWNAGRVG 306
E + A L++ W+D L WN G
Sbjct: 96 EKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.073
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 427
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 220 ESESTVRIQADLQMNWIDKRLSWNAGRVG 306
E + A L++ W+D L WN G
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 28.7 bits (61), Expect = 0.073
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 332 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWXN 493
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 494 DMQTC 508
D Q C
Sbjct: 148 DRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 28.7 bits (61), Expect = 0.073
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 332 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWXN 493
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 494 DMQTC 508
D Q C
Sbjct: 148 DRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 28.7 bits (61), Expect = 0.073
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 332 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWXN 493
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +
Sbjct: 30 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 86
Query: 494 DMQTC 508
D Q C
Sbjct: 87 DRQLC 91
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 28.3 bits (60), Expect = 0.096
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 305 GCSIWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISM 472
G + V SE +W PD+VL N A G+Y + +A + G VS + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 473 QLDNWXNDMQTC 508
++ + D Q+C
Sbjct: 161 NVEYFPFDEQSC 172
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 27.5 bits (58), Expect = 0.17
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIKRLDISTPISMQLDNWXNDM 499
V SE +W PD+VL N A G + +A + G V + + + + D
Sbjct: 97 VPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQ 156
Query: 500 QTC 508
QTC
Sbjct: 157 QTC 159
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.22
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWXNDM 499
++ +LW+PD+++ N+A G Y V+++GS + + M + + D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 500 QTC 508
Q C
Sbjct: 123 QHC 125
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 220 ESESTVRIQADLQMNWIDKRLSWNAGRVG 306
E + A L++ W+D L WN G
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.22
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +2
Query: 305 GCSIWLVSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPISMQL 478
G + V R+WRPD +L N A + VS+ G V + + + +
Sbjct: 76 GIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDV 135
Query: 479 DNWXNDMQTC 508
+ + D Q C
Sbjct: 136 EFFPFDEQRC 145
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 427
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 220 ESESTVRIQADLQMNWIDKRLSWNAGRVG 306
E + A L++ W+D L WN G
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 427
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 220 ESESTVRIQADLQMNWIDKRLSWNAGRVG 306
E + A L++ W+D L WN G
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 427
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 220 ESESTVRIQADLQMNWIDKRLSWNAGRVG 306
E + A L++ W+D L WN G
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 427
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +1
Query: 220 ESESTVRIQADLQMNWIDKRLSWNAGRVG 306
E + A L++ W+D L WN G
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.39
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 320 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWX 490
L + R+W PD+ N + + R+ NGSV R+ ++ M L +
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 491 NDMQTCT 511
D Q C+
Sbjct: 169 LDRQVCS 175
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.39
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 320 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWX 490
L + R+W PD+ N + + R+ NGSV R+ ++ M L +
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 491 NDMQTCT 511
D Q C+
Sbjct: 169 LDRQVCS 175
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 25.8 bits (54), Expect = 0.51
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA 373
V SE +W PD+VL N A
Sbjct: 97 VPSEHIWLPDIVLYNNA 113
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.0 bits (47), Expect = 3.6
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPISMQLDNWXND 496
+ LW+PD LNA + AL + S+ N +V R+ M+ + D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 497 MQTC 508
+Q C
Sbjct: 127 IQIC 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,759
Number of Sequences: 438
Number of extensions: 3573
Number of successful extensions: 43
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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