Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_G19
(777 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 106 7e-22
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 95 1e-18
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 83 8e-15
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 80 7e-14
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 80 7e-14
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 74 3e-12
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 73 1e-11
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 71 4e-11
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 66 1e-09
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 62 2e-08
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 61 3e-08
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 61 3e-08
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 60 8e-08
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 54 3e-06
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 52 1e-05
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 50 9e-05
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 49 1e-04
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 49 1e-04
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 48 3e-04
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 47 5e-04
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 47 5e-04
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 47 5e-04
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 46 0.001
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 44 0.003
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 43 0.010
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 40 0.052
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.85
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 36 0.85
UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_UPI0000DB6FAC Cluster: PREDICTED: similar to Protein ca... 33 8.0
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 106 bits (254), Expect = 7e-22
Identities = 61/118 (51%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Frame = +3
Query: 69 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCV-VPGKNCS 245
MSG LDVL + EEDV K LAA THLG N++FQME Y+YKR++DG ++I K
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 246 GCSCCRNHRXPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXFLLTXIQXGFR 419
PADV VISSR G RAVLKFA GATP G+F P F IQ FR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTF-TNQIQAAFR 117
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 95.5 bits (227), Expect = 1e-18
Identities = 54/118 (45%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
Frame = +3
Query: 69 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXC-VVPGKNCS 245
MSGGL+VL++ E+DVTK+LAA THLG NV+ QM YV+K + DG +I K
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLL 60
Query: 246 GCSCCRNHRXPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXFLLTXIQXGFR 419
PADV V++++ FG RA+LKFA GA P G+F P F IQ FR
Sbjct: 61 AARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTF-TNQIQKAFR 117
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 83.0 bits (196), Expect = 8e-15
Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Frame = +3
Query: 75 GGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXC-VVPGKNCSGC 251
G ++L +ED+ ++LAA H+G++N+ +M+ YV+KRR+DG H++ K
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 252 SCCRNHRXPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
PADV V+S+R +G RAVLKFA GAT G+F P F
Sbjct: 65 RVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNF 110
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 79.8 bits (188), Expect = 7e-14
Identities = 45/119 (37%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 69 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKN--C 242
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY R +G H+I +
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLL 60
Query: 243 SGCSCCRNHRXPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXFLLTXIQXGFR 419
+ + C PADV +I + R LKF G T G+F P F IQ GF+
Sbjct: 61 AARAICAIEN-PADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAF-TNQIQSGFK 117
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 79.8 bits (188), Expect = 7e-14
Identities = 47/99 (47%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +3
Query: 96 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPG-KNCSGCSCCRNHR 272
L ED +LAA THLGA NV E YV+ R DG HVI K
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 273 XPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
P DV ISSR FG RAVLKFA GATP G+F P F
Sbjct: 69 NPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSF 107
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 74.1 bits (174), Expect = 3e-12
Identities = 42/101 (41%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = +3
Query: 90 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXC-VVPGKNCSGCSCCRN 266
++ E D+ MLAA HLG +NV+FQME YV+KRRADG H+I K
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVA 90
Query: 267 HRXPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
P DV ++R +G RAVLKFA GA G+ P +
Sbjct: 91 VENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTY 131
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = -3
Query: 202 PSARRL*T*VSIWKLTFSAPRWVVAASILVTSSSLRASTSNPPDIVALI*VTTKRV*CHW 23
PSARRL T SIWKLTFS PRWVVA +ILV SSSLR S PPD++ + T R C W
Sbjct: 33 PSARRLYTYCSIWKLTFSEPRWVVATNILVMSSSLRDRISKPPDMLTWKELRTSR--CRW 90
Query: 22 E 20
E
Sbjct: 91 E 91
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 70.5 bits (165), Expect = 4e-11
Identities = 40/101 (39%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +3
Query: 90 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCS-GCSCCRN 266
L+ E DV M AA HLG +N N+QME YV+KRR DG ++ +
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71
Query: 267 HRXPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
P D+ V S+R +G RAVLKFA GA G+ P F
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTF 112
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 65.7 bits (153), Expect = 1e-09
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +3
Query: 96 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXC-VVPGKNCSGCSCCRNHR 272
L E DV KML ATTHLG N++ +M+ Y++ R+ DGT V V K
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTID 74
Query: 273 XPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
PA++ V+++R RA+LKF AT G+F P F
Sbjct: 75 DPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNF 113
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 62.1 bits (144), Expect = 2e-08
Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +3
Query: 93 ALNEEDVTKM-LAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCS-GCSCCRN 266
A + E V KM LAA +LG+ N++F M+ YV+ R DGTHVI + +
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYA 65
Query: 267 HRXPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
P DV IS++ FG RAV KFA GA +F P F
Sbjct: 66 VEEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLF 106
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 61.3 bits (142), Expect = 3e-08
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +3
Query: 69 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCV-VPGKNCS 245
M+ L +E+ + ML A H+G +NV +M YVY R +G H+I K
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKV 60
Query: 246 GCSCCRNHRXPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQP 380
P +V V+S+R +G RAVLKF+ G+ P G++ P
Sbjct: 61 AARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIP 105
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Frame = +3
Query: 84 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCSGCS--- 254
D+L + ED+ M+A H+GA N+NF ME YVY+R + + + + S +
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVI 74
Query: 255 CCRNHRXPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
++ P+DV ++ R RA LKF G T G+F P F
Sbjct: 75 AGISNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSF 119
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 59.7 bits (138), Expect = 8e-08
Identities = 24/45 (53%), Positives = 35/45 (77%)
Frame = +3
Query: 69 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADG 203
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YKR+ DG
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDG 45
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 84 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCS-GCSCC 260
D ++ E+D+ +++A+ H+G + ++F M+ YV R +G++++ ++
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90
Query: 261 RNHRXPADVFVISSRXFGXRAVLKFA 338
P DV V+SSR G RAV+KFA
Sbjct: 91 AAIEQPQDVMVVSSRPIGQRAVIKFA 116
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +3
Query: 108 DVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPG-KNCSGCSCCRNHRXPAD 284
DV K++A H G +N + M+ Y++ R +GT++I + K P D
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENPQD 93
Query: 285 VFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
V V S+R FG RA+ KF+ G + G+F P F
Sbjct: 94 VTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTF 128
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 49.6 bits (113), Expect = 9e-05
Identities = 26/90 (28%), Positives = 41/90 (45%)
Frame = +3
Query: 111 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCSGCSCCRNHRXPADVF 290
+ + LAA H+G + M +VY+ R DG +V+ + S +H PA +
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHYDPARIL 99
Query: 291 VISSRXFGXRAVLKFAPPXGATPXWGKFQP 380
V+SSR +G F+ G G+F P
Sbjct: 100 VVSSRQYGQHPARMFSRALGTRAMLGRFIP 129
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 48.8 bits (111), Expect = 1e-04
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = +3
Query: 84 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRA-DGTHVIXCVVPGKN---CSGC 251
D + + +E V ++ + +HLG + N Y+Y R D ++I + +
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARA 69
Query: 252 SCCRNHRXPADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
C H P+ + V+S++ FG + V+KF GATP G+F P F
Sbjct: 70 FCGIKH--PSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSF 113
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +3
Query: 111 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCSGCSCCRNHRXPADVF 290
V L+A H+G + ME++VY+ RA+G +V+ + + + P D+
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRYDPQDII 98
Query: 291 VISSRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
V++SR + R V KFA G+ G+ P F
Sbjct: 99 VVASRPYAYRPVQKFAEVVGSRALVGRIIPGTF 131
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 47.6 bits (108), Expect = 3e-04
Identities = 28/47 (59%), Positives = 29/47 (61%)
Frame = +3
Query: 279 ADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXFLLTXIQXGFR 419
ADV VISSR G RAVLKFA GATP G F P F + IQ FR
Sbjct: 152 ADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTF-TSQIQAAFR 197
Score = 36.7 bits (81), Expect = 0.65
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +3
Query: 54 QISATMSGGLDVLALNEEDVTKMLAATTH 140
Q + TM G DVL +NEEDV K LAA TH
Sbjct: 106 QETFTMFGAPDVLQMNEEDVLKFLAARTH 134
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 47.2 bits (107), Expect = 5e-04
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +3
Query: 138 HLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCSGCSCCRNHRXPADVFVISSRXFGX 317
HL N + Q++ YVYK++ DG +VI CS + V SSR G
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN----RSFCSQLEPLLPLKTQLMSVVTSSRTTGQ 56
Query: 318 RAVLKFAPPXGATPXWGKFQP 380
+AVL FA G+ P G+F P
Sbjct: 57 QAVLSFAAAVGSAPTSGRFTP 77
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 47.2 bits (107), Expect = 5e-04
Identities = 32/90 (35%), Positives = 44/90 (48%)
Frame = +3
Query: 120 MLAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCSGCSCCRNHRXPADVFVIS 299
+L A THLG N +F+M +YKR +G + C+ + P++V VIS
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNGILNLERSYEKLLPVACTIVAV-KHPSEVGVIS 59
Query: 300 SRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
SR G A+LK A GA+P G F F
Sbjct: 60 SRNSGQWAMLKLAAASGASPTVGHFTSGTF 89
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +3
Query: 138 HLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCSGCSCCRNHRXPADVFVISSRXFGX 317
H+G + + M+ Y++K R DG +++ P D+ V++ R +
Sbjct: 18 HIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLARFEPQDILVVAQRQYAF 77
Query: 318 RAVLKFAPPXGATPXWGKFQP 380
R V KFA GAT G+F P
Sbjct: 78 RPVAKFAEVTGATAITGRFNP 98
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 69 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQM 170
MSG LD+L + E+D+ +LAA THLG+ N++FQM
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQM 34
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/90 (26%), Positives = 40/90 (44%)
Frame = +3
Query: 111 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCSGCSCCRNHRXPADVF 290
V L A H+G + ME ++++ R DG +V+ + + + ++ P +
Sbjct: 82 VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYEPEQIL 141
Query: 291 VISSRXFGXRAVLKFAPPXGATPXWGKFQP 380
SSR +G KFA GA G+F P
Sbjct: 142 AASSRQYGRFPAEKFAEAIGARVRTGRFIP 171
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 99 NEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCS-GCSCCRNHRX 275
NE D+ K+L H+G M+ YV+K+R+DG ++I + + +
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEH 63
Query: 276 PADVFVISSRXFGXRAVLKFA 338
P + +SS A++KF+
Sbjct: 64 PKHIIAVSSNNIHQTAIIKFS 84
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 40.3 bits (90), Expect = 0.052
Identities = 24/89 (26%), Positives = 38/89 (42%)
Frame = +3
Query: 123 LAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCSGCSCCRNHRXPADVFVISS 302
LAA +G + + ME ++Y R DG +++ + + P+ V+S
Sbjct: 21 LAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMIARYDPSKFVVVSG 80
Query: 303 RXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
R +G R V KF G P G+ P F
Sbjct: 81 RQYGHRPVRKFCGLVGCKPMLGRVLPGTF 109
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 36.3 bits (80), Expect = 0.85
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 276 PADVFVISSRXFGXRAVLKFAPPXGATPXWGKFQPXXF 389
P D+ V S+R +G RAVLKFA GA G+ P F
Sbjct: 72 PQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTF 109
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 36.3 bits (80), Expect = 0.85
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = +3
Query: 123 LAATTHLGAENVNFQMETYVYKRRADGTHVIXCVVPGKNCSGCSCCRNHRXPADVFVISS 302
LA+ H+G + ME ++Y+ R+DG +V+ + + P D+ +S
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYEPEDILAVSR 73
Query: 303 RXFGXRAVLKFAPPXGATPXWGKFQP 380
R + + +F G G+F P
Sbjct: 74 RIYTMGPLEEFGKYTGIRTVAGRFVP 99
>UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 272
Score = 34.7 bits (76), Expect = 2.6
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 607 FXPPXXXXFXXXGG-GXGPPPKKXXGGXPXXXXSXPPXKXXXXXXXGGXXXXPP 765
F PP F G G GPPP K GG PP GG PP
Sbjct: 153 FSPPPKNNFFCVGEKGGGPPPTKYLGGGEKNKPPPPPPPKKKKRGGGGGGAPPP 206
>UniRef50_UPI0000DB6FAC Cluster: PREDICTED: similar to Protein
cappuccino; n=1; Apis mellifera|Rep: PREDICTED: similar
to Protein cappuccino - Apis mellifera
Length = 1007
Score = 33.1 bits (72), Expect = 8.0
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 613 PPXXXXFXXXGGGXGPPPKKXXGGXPXXXXSXPPXKXXXXXXXGGXXXXPPXXPP 777
PP GGG PPP P PP GG PP PP
Sbjct: 470 PPPPTQSSAAGGGPPPPPPPPPPPTPMIGVPPPPPPPPPSVFAGGQQQQPPPPPP 524
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,897,609
Number of Sequences: 1657284
Number of extensions: 12302282
Number of successful extensions: 23024
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21955
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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