Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_G08
(874 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 48 1e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 41 1e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 41 2e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 40 3e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 39 5e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 37 2e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.001
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 31 0.014
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.014
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 30 0.024
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 29 0.056
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 29 0.056
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.17
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 27 0.17
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.23
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.30
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.91
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.91
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.91
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.91
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 25 1.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.5
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 47.6 bits (108), Expect = 1e-07
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Frame = +1
Query: 91 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHXRHA---NIRESEST 249
I SA C + D LL+ Y+R P S +VV L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 250 VRILADLQMXWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 387
+ L+ W D + W+ E+G T L V SE +W PD+VL N A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113
Score = 31.9 bits (69), Expect = 0.008
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 404 TTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 568
TT++ A + G V W + + + +P D QTC KFGS ++ +D
Sbjct: 120 TTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +1
Query: 109 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHXRHANIRESESTVRILADLQ 273
C++ TS S + L YDR+ P+ K ++ L +H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 274 MXWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 375
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 500 WPNDMQTCTFKFGSRMHNSD 559
WP D+ CT S H S+
Sbjct: 166 WPYDILNCTIHIASWSHGSN 185
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 43.2 bits (97), Expect = 3e-06
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Frame = +1
Query: 82 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHXRH---ANIRES 240
+C +A + + D LL+ Y+R P ++ V + L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 241 ESTVRILADLQMXWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 387
T + + + W D +L WN ++G T V SE +W PD+VL N A
Sbjct: 66 IMTTNVWVEQE--WNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
Score = 29.9 bits (64), Expect = 0.032
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 404 TTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDF--VI 577
T ++ A + + G V W + + ++ +P D QTC KFGS ++ +D +
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVDLRHLA 179
Query: 578 DKRXYSMXESGXWDVTDLXXAVQ 646
+ E G D+TD +V+
Sbjct: 180 QTEDSNQIEVGI-DLTDYYISVE 201
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 41.9 bits (94), Expect = 7e-06
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = +1
Query: 109 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHXR-------HANIRESESTVRILAD 267
C + D LL+ Y++ P + LT+ + N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 268 LQMXWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 387
++ W D +L W+ E+G L V S+ +WRPD+VL N A
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
Score = 30.7 bits (66), Expect = 0.018
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 404 TTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 568
T + A ++ G V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 124 TLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRILADLQMXWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 29.5 bits (63), Expect = 0.042
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 401 GTTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 577
GT + V+++GS ++ + M + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRILADLQMXWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 28.3 bits (60), Expect = 0.098
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 401 GTTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 577
GT + V+++GS ++ + + + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRILADLQMXWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 28.7 bits (61), Expect = 0.074
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 401 GTTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 577
GT + V+++GS ++ + + + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRILADLQMXWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 28.3 bits (60), Expect = 0.098
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 401 GTTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 577
GT + V+++GS ++ + + + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRILADLQMXWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 29.9 bits (64), Expect = 0.032
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 401 GTTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 577
GT + V+++GS ++ + M + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRILADLQMXWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
Score = 30.7 bits (66), Expect = 0.018
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 401 GTTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 577
GT + V++NGS ++ + + + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 41.5 bits (93), Expect = 1e-05
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 395 PPGTTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 574
PP T L V ++GSVS + + + +WP D C FGS +H+ + ++
Sbjct: 145 PPTTCL----VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIF 200
Query: 575 IDKRXYSM---XESGXWD 619
+DK+ + M + WD
Sbjct: 201 LDKKGFHMDGYTNNSKWD 218
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRILADLQMXWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
Score = 30.3 bits (65), Expect = 0.024
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 401 GTTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 577
GT + V++NGS ++ + + + +P D Q C KFGS ++ + +D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRILADLQMXWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
Score = 30.3 bits (65), Expect = 0.024
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 401 GTTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 577
GT + V++NGS ++ + + + +P D Q C KFGS ++ + +D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 41.1 bits (92), Expect = 1e-05
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHXRHAN-IRESESTVRILADLQMXW 282
N +++S ++D+LL YD PD V + + R I E + T + + W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 283 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 381
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 35.1 bits (77), Expect = 9e-04
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 422 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 541
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 111 RLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 40.7 bits (91), Expect = 2e-05
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +1
Query: 136 MIDSLLATYDRESPPDSKIVVNLT--LHXRHANIRESESTVRILAD---LQMXWIDKRLS 300
+ D LL+ Y+R P LT L + + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 387
WN E+G L V SE +W PD+VL N A
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
Score = 33.9 bits (74), Expect = 0.002
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 404 TTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 568
T ++ A + G VSW + + ++ +P D Q+C KFGS +N +D
Sbjct: 133 TLMTKATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 190 IVVNLTLHXRHANIRESESTVRILADLQMXWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 366
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 367 VVLLNAA 387
+L N A
Sbjct: 92 TILYNNA 98
Score = 25.8 bits (54), Expect = 0.52
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 425 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 541
VS+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 113 VSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 39.1 bits (87), Expect = 5e-05
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +2
Query: 434 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI--DKRXYSMXE- 604
NG V W+ + ++ + +P D QTC KFGS N D + + +K + +
Sbjct: 136 NGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDY 195
Query: 605 --SGXWDVTDL 631
SG WD+ ++
Sbjct: 196 WKSGTWDIINV 206
Score = 38.3 bits (85), Expect = 9e-05
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 187 KIVVNLTL-HXRHANIRESESTVRILADLQMXWIDKRLSWNAGEW-GCSTWLVSSERLWR 360
K+ VN L + N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 361 PDVVLLNAA 387
PD+VL N A
Sbjct: 111 PDIVLFNNA 119
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 5e-05
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +1
Query: 136 MIDSLLATYDRESPP--DSKIVVNLTLHXRHANIRESESTVRILAD---LQMXWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + + + + + +I+ ++ W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 387
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
Score = 31.5 bits (68), Expect = 0.011
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 404 TTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 568
T ++ A V +G V W + S+ ++ +P D+QTC K GS ++ +D
Sbjct: 128 TLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 5e-05
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +1
Query: 136 MIDSLLATYDRESPP--DSKIVVNLTLHXRHANIRESESTVRILAD---LQMXWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + + + + + +I+ ++ W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 387
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
Score = 31.1 bits (67), Expect = 0.014
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 404 TTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 568
T + A + + G V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 128 TLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.1 bits (82), Expect = 2e-04
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 268 LQMXWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 387
L++ W D + WN ++G L + RLW+PDV++ N+A
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116
Score = 29.1 bits (62), Expect = 0.056
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +2
Query: 401 GTTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVID 580
GT + V NNG+ ++ + + + +P D Q C KFGS ++ +D +
Sbjct: 122 GTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQ 181
Query: 581 KR----XYSMXESGXWDV 622
S +G WD+
Sbjct: 182 DEAGGDISSFITNGEWDL 199
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.001
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 422 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 541
R+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 143 RISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
Score = 30.3 bits (65), Expect = 0.024
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Frame = +1
Query: 124 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHXRHAN-IRESESTVRILADLQMXWID 288
++++++++LL Y+ P + VV + R + E + + + W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 289 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 381
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.014
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 422 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 574
R+ NGSV + R+ ++ M L +P D Q C+ + S +D + F+
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.014
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 422 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 574
R+ NGSV + R+ ++ M L +P D Q C+ + S +D + F+
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 30.3 bits (65), Expect = 0.024
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHXRH-ANIRESESTVRILADLQMXW 282
N ++S ++DS +YD+ P+ + V +T++ +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 381
D RL++ G T V SE +W PD +N
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 404 TTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 541
T+ R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 113 TSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 29.1 bits (62), Expect = 0.056
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 416 VARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 541
+ R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 140 LVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 29.1 bits (62), Expect = 0.056
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHXRH-ANIRESESTVRILADLQMXW 282
N ++S ++DS +YD+ P+ + V +T++ +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 381
D RL++ G T V SE +W PD +N
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 404 TTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 541
T+ R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 113 TSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 27.5 bits (58), Expect = 0.17
Identities = 9/42 (21%), Positives = 23/42 (54%)
Frame = +2
Query: 449 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 574
++ +L + +M+ +++P+D Q C+ S H + + F+
Sbjct: 122 YMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 404 TTLSVARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 541
T+ R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 52 TSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 425 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHN 553
+ +G V RL + ++L+ +P D+Q C F S HN
Sbjct: 124 IDPSGMVRLNTRLQATLNCGLRLEKFPFDVQECPLIFESWTHN 166
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.30
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +2
Query: 440 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVID 580
++ ++ +L + +M +P+D Q C + S H +D M F D
Sbjct: 150 TILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.91
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 422 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 574
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.0 bits (52), Expect = 0.91
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 422 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 574
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.0 bits (52), Expect = 0.91
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 422 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 574
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.0 bits (52), Expect = 0.91
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 422 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 574
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 438 PLLDTRATESVVPGGGCSRV*QYHVRPPQAFRGHQPSAA 322
PL +TES G S +HV PP GH S+A
Sbjct: 489 PLGSVSSTESTCSGEVASLTEYHHVAPPS---GHHASSA 524
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 333 PSAAAPFPCVPTQS 292
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,574
Number of Sequences: 438
Number of extensions: 4393
Number of successful extensions: 101
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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