Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_F24
(903 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0466 - 24602715-24603964,24605762-24605944,24606381-246072... 34 0.13
08_01_0968 + 9773858-9774301 33 0.41
01_05_0570 + 23347957-23348940,23349038-23349181,23349666-23350046 32 0.54
10_08_0357 - 17158414-17160150,17160534-17160710 31 0.95
01_01_0121 - 1136241-1136624 31 0.95
12_01_0832 - 7718765-7719088 30 2.2
11_01_0299 - 2241760-2241990,2242958-2243331,2243427-2243754 30 2.2
12_02_0065 - 13109652-13110746,13110843-13111762,13139462-131395... 30 2.9
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 30 2.9
04_02_0002 + 8412568-8412781,8412915-8413015,8413114-8413185,841... 30 2.9
12_01_0909 - 8828921-8829004,8829204-8829249,8829798-8829919,883... 29 3.8
10_07_0019 + 11931519-11932310 29 3.8
06_01_0731 + 5380500-5380631,5380717-5380767,5381844-5381889,538... 29 3.8
10_02_0175 - 6207485-6207898 29 5.1
03_02_0162 + 6053144-6053365,6053474-6053548,6054477-6054623,605... 29 5.1
02_05_0027 - 25172106-25172618 29 5.1
10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376 29 6.7
08_01_0786 - 7606984-7607037,7607235-7607379,7608103-7608163,760... 29 6.7
05_01_0533 + 4594169-4595065,4598375-4598983 29 6.7
03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,205... 29 6.7
07_03_0382 + 17470508-17470807,17471449-17474517 28 8.8
04_03_0875 - 20475201-20475415,20475682-20476247,20478253-20478269 28 8.8
>03_05_0466 -
24602715-24603964,24605762-24605944,24606381-24607286,
24609446-24609516,24609737-24609846,24610073-24610108,
24610211-24610278,24610655-24610760,24610850-24610997,
24611091-24611218,24611319-24611454,24611924-24612072
Length = 1096
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 714 ESTSXVLFLQQG-RGXAPRKRXSTRACAPPCPRCSH 610
ES+S V+FL G G P R PPCP CSH
Sbjct: 2 ESSSSVIFLGTGCSGALPDARCLIHPSTPPCPVCSH 37
>08_01_0968 + 9773858-9774301
Length = 147
Score = 32.7 bits (71), Expect = 0.41
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +1
Query: 130 VRRSRKVPRPDT*RRRSVATSAACDCGQGGSWVPHRLVRGGVRARRDASLGPGSGGAR 303
VRRS++V +RRS+A +AA G GG+ R+V+G +R R L PG R
Sbjct: 56 VRRSQRVACSSRRKRRSLAMAAAS--GGGGALAARRMVKGRLRLLR--RLVPGGEALR 109
>01_05_0570 + 23347957-23348940,23349038-23349181,23349666-23350046
Length = 502
Score = 32.3 bits (70), Expect = 0.54
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 9/111 (8%)
Frame = +2
Query: 56 LLPNVGGPDMVVRRLYTGVVRSMALYGAPVRCHALTR-------DDVAALRRPQRAIAVR 214
LLP+ GP + R + V R +A + P RC LT AAL R +A +
Sbjct: 93 LLPDDDGPQIFWRDVADAVSRVLAAHPGPFRCVRLTNACSYAGSRGAAALSRWLGVLAAK 152
Query: 215 AVRGYRTVSFEAACVLAGTPPWDLEVEALAADY--AWRCDLRSREEPRPGA 361
V+ V A V P L V +L Y WR E RPGA
Sbjct: 153 GVQELVLVFLHAWPVRVEPPADVLRVSSLRRLYLGLWR-SFPDTEHLRPGA 202
>10_08_0357 - 17158414-17160150,17160534-17160710
Length = 637
Score = 31.5 bits (68), Expect = 0.95
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = -3
Query: 283 VPGRRPGEHARRLERDGAVPTNRPDRNRTLRTSQRCDVVTCQGVAPYGSAVQC 125
V RRP +RR DG V T R D N LR+ + G A + VQC
Sbjct: 84 VEQRRPASPSRRPLEDGVVETRRMDDNALLRSLVEKGLAVKTGTAAH-HTVQC 135
>01_01_0121 - 1136241-1136624
Length = 127
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 181 VATSAACDCGQGGSWVPHRLVRGGVRARRDASLGPGSGGARCGLR 315
+AT + G+GG + H+ +G V GSGGA CG R
Sbjct: 1 MATVVPANSGEGGGYGEHQWSKGSVVVAAAQPGEAGSGGAPCGWR 45
>12_01_0832 - 7718765-7719088
Length = 107
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -3
Query: 658 EGQYASVCSAVSSLQPLQWWHFGVGSLRAMRCR*RPKQPCPVSTCVARKVRRPRSIHP 485
+G+ S+ +L + +WH+G G A R +P PC + T +A+ V + + P
Sbjct: 26 KGKACGETSSPVALDAVPYWHYGEGQGLAKPLRPQPLTPCLIGT-MAKGVGVAKPLRP 82
>11_01_0299 - 2241760-2241990,2242958-2243331,2243427-2243754
Length = 310
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 583 SLRAMRCR*RPKQPCPVSTCVARKVRRPRSIHPVQEDRAD 464
S R RCR RP CP S KV P+ PV ++ AD
Sbjct: 129 SYRCCRCRRRPLPKCPHSDFYYSKVPEPQ---PVSQENAD 165
>12_02_0065 -
13109652-13110746,13110843-13111762,13139462-13139528,
13139607-13139675,13139877-13140020,13140100-13140171,
13140316-13140387,13140466-13140558,13140655-13140726,
13140809-13140925
Length = 906
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 320 RCDLRSREEPRPGAAEVRARKLESRRAVFEAWSRRLADPAYGRR 451
RCDL RE R A + R + + +R VF + + YG++
Sbjct: 41 RCDLEGREADRRSARDARHARSKGKRLVFVTNNSTKSRKQYGKK 84
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 29.9 bits (64), Expect = 2.9
Identities = 25/64 (39%), Positives = 30/64 (46%)
Frame = -3
Query: 193 RTSQRCDVVTCQGVAPYGSAVQCH*PHHPRVEAAHHHVGTPDVRQQPTQRAGGCHQSGTQ 14
R + R VV G A S+ H HHP HH V TP +Q Q+ GG Q G Q
Sbjct: 45 RAASRYFVVDAAGFA--ASSYDDH--HHPH----HHLVMTPRGEEQQRQQGGGAAQ-GAQ 95
Query: 13 SFAS 2
+ AS
Sbjct: 96 AAAS 99
>04_02_0002 +
8412568-8412781,8412915-8413015,8413114-8413185,
8413267-8413380,8414248-8414269,8414450-8414598,
8415054-8415203,8415369-8415401,8418268-8418474
Length = 353
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 272 PPWDLEV-EALAADYAWRCD 328
PPWDLE+ +A Y +RCD
Sbjct: 106 PPWDLEIGDAFIIHYTYRCD 125
>12_01_0909 -
8828921-8829004,8829204-8829249,8829798-8829919,
8830013-8830078,8830520-8830771,8830859-8830939,
8831193-8831294,8831373-8831410,8831497-8831602,
8831694-8831816,8831918-8831994,8833095-8833240,
8833355-8833533
Length = 473
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 327 ISAPGRS-RVPARRKFERGSLNLGVPCSRRGLA-AW 428
+ AP R+ RVP+ ++F RGS GVPC +A AW
Sbjct: 341 LRAPVRAGRVPSWQEFARGSRPSGVPCMSDEVATAW 376
>10_07_0019 + 11931519-11932310
Length = 263
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 208 GQGGSWVPHRLVRGGVRARRDASLGPGSGG 297
G GG W R+ RGG R R DA G G+ G
Sbjct: 73 GDGGLWTNQRVGRGGGR-RGDAEGGDGAAG 101
>06_01_0731 +
5380500-5380631,5380717-5380767,5381844-5381889,
5383356-5383495
Length = 122
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 241 VRGGVRARRDASLGPGSGGARCGLRLAM*SP 333
+R G RD ++ PG G ARC L++ +P
Sbjct: 11 LRSGAHLHRDPTMNPGLGSARCPRCLSLLTP 41
>10_02_0175 - 6207485-6207898
Length = 137
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/59 (40%), Positives = 27/59 (45%)
Frame = +1
Query: 124 GTVRRSRKVPRPDT*RRRSVATSAACDCGQGGSWVPHRLVRGGVRARRDASLGPGSGGA 300
G RR R+ T R R+ AA G+ W R RGG R R DA G G GGA
Sbjct: 37 GRKRRRRRRAEAATARWRA----AAARRGEWRRWRQRR--RGGGRRRPDAVKGGGGGGA 89
>03_02_0162 +
6053144-6053365,6053474-6053548,6054477-6054623,
6054749-6055300,6055387-6055622,6055914-6056130
Length = 482
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -1
Query: 504 VLGRFTQSKRTGRIASTVRRP*AGSARRRDHASNTARRDSSFRARTSAAPGRGS 343
+L F+QS+ + +TV R S RDH N ARR + A SAA R S
Sbjct: 173 LLKLFSQSQIIEALGATVERVRPVSITHRDHFVNIARR-RALEANKSAAAQRES 225
>02_05_0027 - 25172106-25172618
Length = 170
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 340 PGAEIT-SPSVIRSERLHFQVPGRRPGEHARRLERDGAVPTNRPDRNRTLRTSQR 179
P AE+ SP R + + PGR+ A + G++P N PD ++ L R
Sbjct: 49 PAAEVAESPRAARHQVPAARPPGRKAAAAASKPAAHGSLPVNIPDWSKILGDEYR 103
>10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376
Length = 746
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 151 PRPDT*RRRSVATSAACDCGQGGS 222
PRPD RRRSVA +AA G+
Sbjct: 15 PRPDVARRRSVAVAAAAGAAGAGA 38
>08_01_0786 -
7606984-7607037,7607235-7607379,7608103-7608163,
7608273-7608465
Length = 150
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +2
Query: 125 ALYGAPVRCHALTRDDVAALRRPQRAIAVRAVRGYRTVSFEAA 253
A AP R R VAA RP RA A+ A G R V+ AA
Sbjct: 6 AAAAAPARSALPFRSRVAAAARPGRAPALSAAPGRRLVARRAA 48
>05_01_0533 + 4594169-4595065,4598375-4598983
Length = 501
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 438 AGSARRRDHASNTARRDSSFRARTSAAPGRGSSL 337
A +ARR D AS A +FRA APG G++L
Sbjct: 183 ARAARRLDQASLGAVMIPAFRAAAGDAPGAGATL 216
>03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,
2053164-2053250,2053476-2053684,2054115-2054340,
2054473-2054510,2054657-2054714,2055363-2055662,
2055832-2055903,2055988-2056112,2056240-2056312,
2056417-2056521
Length = 1218
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 107 GVVRSMALYGAPVRCHALTRDDVAALRRPQRAIAVRAVRGYRTVSFEAACVLAGTPP 277
GV +MA Y A +R HA + RRP A+ R + + +A TPP
Sbjct: 999 GVAVTMASYAAVLRPHASSTRTPRGPRRPAGAVPPTPRRAALRATTRSPPAVAATPP 1055
>07_03_0382 + 17470508-17470807,17471449-17474517
Length = 1122
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Frame = +2
Query: 263 AGTPPWDLEVEALAAD-----YAWRCDLR--SREEPRPGAAEVRARKLESRRAVFEAWSR 421
A PP EALAA+ +A +LR +R GAA A E+R A AW R
Sbjct: 5 AALPPAARSAEALAAEVGGHAHAAADELRGLARRLDAVGAAAAGAEAREARDAGARAWLR 64
Query: 422 RLADPAY 442
+ D Y
Sbjct: 65 EILDALY 71
>04_03_0875 - 20475201-20475415,20475682-20476247,20478253-20478269
Length = 265
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 230 GTHEPP*PQSHAADVATLRRRHVSGRGTLR 141
G HEP Q H D AT RR GRG L+
Sbjct: 156 GGHEPSKEQRHRQDFATTRRH--GGRGVLQ 183
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,780,301
Number of Sequences: 37544
Number of extensions: 584608
Number of successful extensions: 2603
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2601
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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