Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_F24
(903 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063110-1|AAH63110.1| 271|Homo sapiens IL17RE protein protein. 32 3.3
AY358451-1|AAQ88816.1| 667|Homo sapiens GSSR3056 protein. 32 3.3
AK074238-1|BAB85028.1| 482|Homo sapiens protein ( Homo sapiens ... 32 3.3
AF458069-1|AAM77573.1| 667|Homo sapiens IL-17RE protein. 32 3.3
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 31 5.7
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 5.7
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 5.7
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 31 5.7
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 31 5.7
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 5.7
AF442769-1|AAL35361.1| 368|Homo sapiens achaete-scute associate... 31 7.6
X57197-1|CAA40483.1| 494|Homo sapiens ATFa protein. 30 10.0
X52943-1|CAA37118.1| 483|Homo sapiens protein ( Human mRNA for ... 30 10.0
AL137002-4|CAM24069.1| 312|Homo sapiens MCF.2 cell line derived... 30 10.0
>BC063110-1|AAH63110.1| 271|Homo sapiens IL17RE protein protein.
Length = 271
Score = 31.9 bits (69), Expect = 3.3
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 81 TWWCAASTRGWCGQ-WHCT 134
TWW ST+ WC + WHC+
Sbjct: 59 TWWALFSTKPWCVRVWHCS 77
>AY358451-1|AAQ88816.1| 667|Homo sapiens GSSR3056 protein.
Length = 667
Score = 31.9 bits (69), Expect = 3.3
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 81 TWWCAASTRGWCGQ-WHCT 134
TWW ST+ WC + WHC+
Sbjct: 59 TWWALFSTKPWCVRVWHCS 77
>AK074238-1|BAB85028.1| 482|Homo sapiens protein ( Homo sapiens
cDNA FLJ23658 fis, clone COLF3416. ).
Length = 482
Score = 31.9 bits (69), Expect = 3.3
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 81 TWWCAASTRGWCGQ-WHCT 134
TWW ST+ WC + WHC+
Sbjct: 59 TWWALFSTKPWCVRVWHCS 77
>AF458069-1|AAM77573.1| 667|Homo sapiens IL-17RE protein.
Length = 667
Score = 31.9 bits (69), Expect = 3.3
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = +3
Query: 81 TWWCAASTRGWCGQ-WHCT 134
TWW ST+ WC + WHC+
Sbjct: 59 TWWALFSTKPWCVRVWHCS 77
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.1 bits (67), Expect = 5.7
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 1/129 (0%)
Frame = -1
Query: 546 SRVP*APASLGR*DVLGRFTQSKRTGRIASTVRRP*AGSARRRDHASNTARRDSSFRART 367
SR P S R ++S+ R S R P RRR + + ARR R+RT
Sbjct: 596 SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP----VRRRSRSRSPARRSGRSRSRT 651
Query: 366 SAAPGRG-SSLEXXXXXXXXXXXXXXXXXSQGGVPASTHAASNETVRYPRTALTAIARCG 190
A GR S S+ PA + + T R R+ ++ R G
Sbjct: 652 PARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRG 711
Query: 189 RRNAATSSR 163
R ++ T R
Sbjct: 712 RSHSRTPQR 720
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 31.1 bits (67), Expect = 5.7
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 1/129 (0%)
Frame = -1
Query: 546 SRVP*APASLGR*DVLGRFTQSKRTGRIASTVRRP*AGSARRRDHASNTARRDSSFRART 367
SR P S R ++S+ R S R P RRR + + ARR R+RT
Sbjct: 596 SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP----VRRRSRSRSPARRSGRSRSRT 651
Query: 366 SAAPGRG-SSLEXXXXXXXXXXXXXXXXXSQGGVPASTHAASNETVRYPRTALTAIARCG 190
A GR S S+ PA + + T R R+ ++ R G
Sbjct: 652 PARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRG 711
Query: 189 RRNAATSSR 163
R ++ T R
Sbjct: 712 RSHSRTPQR 720
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 31.1 bits (67), Expect = 5.7
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 1/129 (0%)
Frame = -1
Query: 546 SRVP*APASLGR*DVLGRFTQSKRTGRIASTVRRP*AGSARRRDHASNTARRDSSFRART 367
SR P S R ++S+ R S R P RRR + + ARR R+RT
Sbjct: 596 SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP----VRRRSRSRSPARRSGRSRSRT 651
Query: 366 SAAPGRG-SSLEXXXXXXXXXXXXXXXXXSQGGVPASTHAASNETVRYPRTALTAIARCG 190
A GR S S+ PA + + T R R+ ++ R G
Sbjct: 652 PARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRG 711
Query: 189 RRNAATSSR 163
R ++ T R
Sbjct: 712 RSHSRTPQR 720
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 31.1 bits (67), Expect = 5.7
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 1/129 (0%)
Frame = -1
Query: 546 SRVP*APASLGR*DVLGRFTQSKRTGRIASTVRRP*AGSARRRDHASNTARRDSSFRART 367
SR P S R ++S+ R S R P RRR + + ARR R+RT
Sbjct: 561 SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP----VRRRSRSRSPARRSGRSRSRT 616
Query: 366 SAAPGRG-SSLEXXXXXXXXXXXXXXXXXSQGGVPASTHAASNETVRYPRTALTAIARCG 190
A GR S S+ PA + + T R R+ ++ R G
Sbjct: 617 PARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRG 676
Query: 189 RRNAATSSR 163
R ++ T R
Sbjct: 677 RSHSRTPQR 685
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.1 bits (67), Expect = 5.7
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 1/129 (0%)
Frame = -1
Query: 546 SRVP*APASLGR*DVLGRFTQSKRTGRIASTVRRP*AGSARRRDHASNTARRDSSFRART 367
SR P S R ++S+ R S R P RRR + + ARR R+RT
Sbjct: 386 SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP----VRRRSRSRSPARRSGRSRSRT 441
Query: 366 SAAPGRG-SSLEXXXXXXXXXXXXXXXXXSQGGVPASTHAASNETVRYPRTALTAIARCG 190
A GR S S+ PA + + T R R+ ++ R G
Sbjct: 442 PARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRG 501
Query: 189 RRNAATSSR 163
R ++ T R
Sbjct: 502 RSHSRTPQR 510
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.1 bits (67), Expect = 5.7
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 1/129 (0%)
Frame = -1
Query: 546 SRVP*APASLGR*DVLGRFTQSKRTGRIASTVRRP*AGSARRRDHASNTARRDSSFRART 367
SR P S R ++S+ R S R P RRR + + ARR R+RT
Sbjct: 644 SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP----VRRRSRSRSPARRSGRSRSRT 699
Query: 366 SAAPGRG-SSLEXXXXXXXXXXXXXXXXXSQGGVPASTHAASNETVRYPRTALTAIARCG 190
A GR S S+ PA + + T R R+ ++ R G
Sbjct: 700 PARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRG 759
Query: 189 RRNAATSSR 163
R ++ T R
Sbjct: 760 RSHSRTPQR 768
>AF442769-1|AAL35361.1| 368|Homo sapiens achaete-scute associated
protein protein.
Length = 368
Score = 30.7 bits (66), Expect = 7.6
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +2
Query: 500 RTSHLPSDAGAHGTRLFRSLPA 565
RT HLP GA GTR FR L A
Sbjct: 253 RTKHLPGAGGAPGTRRFRQLGA 274
>X57197-1|CAA40483.1| 494|Homo sapiens ATFa protein.
Length = 494
Score = 30.3 bits (65), Expect = 10.0
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = -3
Query: 451 PSPVGGVRQAARPRLEHGTPRFKLPRSNFRRAGTRL--LPGAEITSPSVIRSERLHFQVP 278
PSP + QA + G+P LP G + LPG + PSVI R VP
Sbjct: 181 PSPTSVITQAPPSNRQMGSPTGSLPLVMHLANGQTMPVLPGPPVQMPSVISLARPVSMVP 240
Query: 277 GRRPGEHARRLERDGAV-PTNRP 212
PG + G++ P+ P
Sbjct: 241 -NIPGIPGPPVNSSGSISPSGHP 262
>X52943-1|CAA37118.1| 483|Homo sapiens protein ( Human mRNA for
ATF-a transcription factor. ).
Length = 483
Score = 30.3 bits (65), Expect = 10.0
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = -3
Query: 451 PSPVGGVRQAARPRLEHGTPRFKLPRSNFRRAGTRL--LPGAEITSPSVIRSERLHFQVP 278
PSP + QA + G+P LP G + LPG + PSVI R VP
Sbjct: 170 PSPTSVITQAPPSNRQMGSPTGSLPLVMHLANGQTMPVLPGPPVQMPSVISLARPVSMVP 229
Query: 277 GRRPGEHARRLERDGAV-PTNRP 212
PG + G++ P+ P
Sbjct: 230 -NIPGIPGPPVNSSGSISPSGHP 251
>AL137002-4|CAM24069.1| 312|Homo sapiens MCF.2 cell line derived
transforming sequence-like protein.
Length = 312
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 419 ETTPRTRHAEIQASALELPPRRDAAPPWSGDHIAKRNPQRAPPLP 285
+T P + + ++ L PP + A P S D AKR+ ++ P P
Sbjct: 199 KTDPLSLEGYVSSAPLTKPPEKGKASPTSPDKKAKRHEVKSDPTP 243
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,115,700
Number of Sequences: 237096
Number of extensions: 2767485
Number of successful extensions: 9194
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9188
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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