BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_F23
(917 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 31 2.2
X64429-1|CAA45771.1| 515|Drosophila melanogaster binding factor... 31 2.9
U27181-1|AAC46917.1| 926|Drosophila melanogaster MEI-9 protein. 30 5.1
BT001319-1|AAN71074.1| 961|Drosophila melanogaster AT15210p pro... 30 5.1
AE014298-619|AAF45938.1| 961|Drosophila melanogaster CG3697-PA ... 30 5.1
Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein. 29 8.9
D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein. 29 8.9
BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p pro... 29 8.9
AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-P... 29 8.9
AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-P... 29 8.9
AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-P... 29 8.9
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 31.1 bits (67), Expect = 2.2
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = -3
Query: 465 ETPCARRYYRPRTASAQPSK**NNESSGFSATIAQRSPTYATPLMSPYNARLESSSTGSS 286
E P Y P + SK S + + +P++ + S Y A +S+S+G
Sbjct: 117 EPPVNNAYLPPSSPQRPSSKYGAPPVSSYLPPASGPAPSFNSAPSSSYAAPSQSASSGGP 176
Query: 285 FPADSPKP 262
+PA +P+P
Sbjct: 177 YPAAAPRP 184
>X64429-1|CAA45771.1| 515|Drosophila melanogaster binding factor-2
box B protein.
Length = 515
Score = 30.7 bits (66), Expect = 2.9
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Frame = -3
Query: 558 SPPGSVLEPDHAGVLNGDERFRHVTTLH----AWNETPCARRYYRPRTASAQPSK**NNE 391
+PP S+ D G L+ + FRH W P Y TA A ++ +
Sbjct: 317 TPPSSLPSDDSEGNLSPEHLFRHCRPTQPFPSLWPIQPAVSHPYGSATA-ASITRSSSGS 375
Query: 390 SSGFSATIAQRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVLLA 250
+S ++ + T P+ +P + STG+ + K LLA
Sbjct: 376 ASASGSSTSSTVTTTRQPIHTPLISSQPKGSTGTLLLTEEEKRTLLA 422
>U27181-1|AAC46917.1| 926|Drosophila melanogaster MEI-9 protein.
Length = 926
Score = 29.9 bits (64), Expect = 5.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 413 RVSNETMKVVVFQRRSRNDLPLMLHLSCLLTMP 315
+ + ET KV+V R R+DLP ++H L +P
Sbjct: 647 QATKETPKVIVDMREFRSDLPCLIHKRGLEVLP 679
>BT001319-1|AAN71074.1| 961|Drosophila melanogaster AT15210p
protein.
Length = 961
Score = 29.9 bits (64), Expect = 5.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 413 RVSNETMKVVVFQRRSRNDLPLMLHLSCLLTMP 315
+ + ET KV+V R R+DLP ++H L +P
Sbjct: 690 QATKETPKVIVDMREFRSDLPCLIHKRGLEVLP 722
>AE014298-619|AAF45938.1| 961|Drosophila melanogaster CG3697-PA
protein.
Length = 961
Score = 29.9 bits (64), Expect = 5.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 413 RVSNETMKVVVFQRRSRNDLPLMLHLSCLLTMP 315
+ + ET KV+V R R+DLP ++H L +P
Sbjct: 690 QATKETPKVIVDMREFRSDLPCLIHKRGLEVLP 722
>Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein.
Length = 1403
Score = 29.1 bits (62), Expect = 8.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 441 YRPRTASAQPSK**NNESSGFSATIAQRSPTYATPLMSPYNA-RLESSSTGSSFPADSPK 265
++P++ S S NN +S A +A SPT +P+ +A L +++ G+ F S K
Sbjct: 18 FQPQSVSTANSSSSNNNNSSTPAALATHSPTSNSPVSGASSASSLLTAAFGNLFGGSSAK 77
>D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein.
Length = 1403
Score = 29.1 bits (62), Expect = 8.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 441 YRPRTASAQPSK**NNESSGFSATIAQRSPTYATPLMSPYNA-RLESSSTGSSFPADSPK 265
++P++ S S NN +S A +A SPT +P+ +A L +++ G+ F S K
Sbjct: 18 FQPQSVSTANSSSSNNNNSSTPAALATHSPTSNSPVSGASSASSLLTAAFGNLFGGSSAK 77
>BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p
protein.
Length = 1374
Score = 29.1 bits (62), Expect = 8.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 441 YRPRTASAQPSK**NNESSGFSATIAQRSPTYATPLMSPYNA-RLESSSTGSSFPADSPK 265
++P++ S S NN +S A +A SPT +P+ +A L +++ G+ F S K
Sbjct: 18 FQPQSVSTANSSSSNNNNSSTPAALATHSPTSNSPVSGASSASSLLTAAFGNLFGGSSAK 77
>AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-PD,
isoform D protein.
Length = 1374
Score = 29.1 bits (62), Expect = 8.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 441 YRPRTASAQPSK**NNESSGFSATIAQRSPTYATPLMSPYNA-RLESSSTGSSFPADSPK 265
++P++ S S NN +S A +A SPT +P+ +A L +++ G+ F S K
Sbjct: 18 FQPQSVSTANSSSSNNNNSSTPAALATHSPTSNSPVSGASSASSLLTAAFGNLFGGSSAK 77
>AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-PC,
isoform C protein.
Length = 1403
Score = 29.1 bits (62), Expect = 8.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 441 YRPRTASAQPSK**NNESSGFSATIAQRSPTYATPLMSPYNA-RLESSSTGSSFPADSPK 265
++P++ S S NN +S A +A SPT +P+ +A L +++ G+ F S K
Sbjct: 18 FQPQSVSTANSSSSNNNNSSTPAALATHSPTSNSPVSGASSASSLLTAAFGNLFGGSSAK 77
>AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-PA,
isoform A protein.
Length = 1535
Score = 29.1 bits (62), Expect = 8.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 441 YRPRTASAQPSK**NNESSGFSATIAQRSPTYATPLMSPYNA-RLESSSTGSSFPADSPK 265
++P++ S S NN +S A +A SPT +P+ +A L +++ G+ F S K
Sbjct: 18 FQPQSVSTANSSSSNNNNSSTPAALATHSPTSNSPVSGASSASSLLTAAFGNLFGGSSAK 77
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,454,247
Number of Sequences: 53049
Number of extensions: 779844
Number of successful extensions: 2310
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2310
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -