Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_F18
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK090448-1|BAC03429.1|  700|Homo sapiens FLJ00369 protein protein.     30   9.8  

>AK090448-1|BAC03429.1|  700|Homo sapiens FLJ00369 protein protein.
          Length = 700

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
 Frame = -3

Query: 753 YXSTDTTLSVRPYPCGLDGTRGSGSPPRKAAT*SACPAA---PLCRIPV*PCPSRSRRA* 583
           + S  +  S +P PC L  T      PR A   S CP+    PLC +P  PCP  S  A 
Sbjct: 574 FFSPSSPFSFKP-PCPLPPT------PRLAPA-SWCPSLNPPPLCSVPWGPCPPYSWGAG 625

Query: 582 TSHVDVACRERAKAMLGPG 526
           ++     CR     ++G G
Sbjct: 626 SASCPSLCRCFGDPLVGAG 644


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,076,767
Number of Sequences: 237096
Number of extensions: 3350741
Number of successful extensions: 8192
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 7608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8191
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)