Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_F18
         (890 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    29   0.057
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    29   0.057
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   2.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   2.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.5  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 29.1 bits (62), Expect = 0.057
 Identities = 33/122 (27%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
 Frame = -2

Query: 568 CCLQRAGQSDARTGLLIGQEFSLMISLSSRLRPC*ISGWISSKFLRGAFLPGG--LSVSI 395
           C ++    SD      +  EF    S+    R   + G I      G F  G   L +S 
Sbjct: 621 CAIKSVVPSDESHWNDLAMEFYYNRSIPDHKRIVKLRGSIIDHSYGGGFGFGSAVLLISD 680

Query: 394 VIPLGSTCGGNAXXXXXXXXSTADNITEGIPTLSSQTQIHSD*TLHNTALDFQRSVARSE 215
            +     CG  A          A ++ EGI  L SQ  +H D  L N  LD +    R++
Sbjct: 681 RLSRDLYCGIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIEN---RAK 737

Query: 214 LT 209
           LT
Sbjct: 738 LT 739


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 29.1 bits (62), Expect = 0.057
 Identities = 33/122 (27%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
 Frame = -2

Query: 568  CCLQRAGQSDARTGLLIGQEFSLMISLSSRLRPC*ISGWISSKFLRGAFLPGG--LSVSI 395
            C ++    SD      +  EF    S+    R   + G I      G F  G   L +S 
Sbjct: 659  CAIKSVVPSDESHWNDLAMEFYYNRSIPDHKRIVKLRGSIIDHSYGGGFGFGSAVLLISD 718

Query: 394  VIPLGSTCGGNAXXXXXXXXSTADNITEGIPTLSSQTQIHSD*TLHNTALDFQRSVARSE 215
             +     CG  A          A ++ EGI  L SQ  +H D  L N  LD +    R++
Sbjct: 719  RLSRDLYCGIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIEN---RAK 775

Query: 214  LT 209
            LT
Sbjct: 776  LT 777


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = -1

Query: 761 DRXIXARTQLCRYGXTLAG*MVPEAVXRLHERRQHNRLVRQLHCAEYLCDHVPVEAV 591
           D+    R Q CRY   LA  M  EAV     +R   R   ++     L   +P+E +
Sbjct: 155 DKRQRNRCQYCRYQKCLAMGMKREAVQE-ERQRTKERDQSEVESTSSLHSDMPIERI 210


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = -1

Query: 761 DRXIXARTQLCRYGXTLAG*MVPEAVXRLHERRQHNRLVRQLHCAEYLCDHVPVEAV 591
           D+    R Q CRY   LA  M  EAV     +R   R   ++     L   +P+E +
Sbjct: 155 DKRQRNRCQYCRYQKCLAMGMKREAVQE-ERQRTKERDQSEVESTSSLHSDMPIERI 210


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 14/63 (22%), Positives = 27/63 (42%)
 Frame = -2

Query: 319 ITEGIPTLSSQTQIHSD*TLHNTALDFQRSVARSELTHVSHPKPLLSHVQHWSQFLSQIL 140
           +  G  TL ++T    D  + N+ +   R   +        P+PL+  ++HW   L   +
Sbjct: 453 LESGTTTLQTRTMHPYDHLVWNSWMPSIRGAIQQWTCR--QPEPLIELIEHWMPLLPNWI 510

Query: 139 LHH 131
           L +
Sbjct: 511 LEN 513


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 400 SLTVHQARKHPLKTSK 447
           SLT HQ ++H L+ ++
Sbjct: 229 SLTTHQQKRHKLRVTR 244


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,110
Number of Sequences: 438
Number of extensions: 5410
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)