Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_F11
(895 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 35 0.35
AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 35 0.35
U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein. 35 0.46
CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein. 35 0.46
BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5 pr... 35 0.46
AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 35 0.46
AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein. 35 0.46
AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein. 35 0.46
AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein. 35 0.46
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 32 2.4
L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein. 32 3.2
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 32 3.2
BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, sub... 32 3.2
BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, sub... 32 3.2
AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein. 32 3.2
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.3
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.3
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.3
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.3
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.3
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.3
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.3
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.3
AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens ... 31 4.3
X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein. 31 7.5
BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility c... 31 7.5
BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility c... 31 7.5
BC036444-1|AAH36444.1| 697|Homo sapiens cytoplasmic polyadenyla... 30 9.9
AL365398-3|CAI14105.1| 684|Homo sapiens cytoplasmic polyadenyla... 30 9.9
AL365398-2|CAI14104.1| 698|Homo sapiens cytoplasmic polyadenyla... 30 9.9
AL158040-5|CAI13637.1| 684|Homo sapiens cytoplasmic polyadenyla... 30 9.9
AL158040-4|CAI13636.1| 698|Homo sapiens cytoplasmic polyadenyla... 30 9.9
AB023157-1|BAA76784.2| 699|Homo sapiens KIAA0940 protein protein. 30 9.9
>AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 35.1 bits (77), Expect = 0.35
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = +3
Query: 495 SHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP 674
S +W P PPL S L + P S QPP P P P+ + PG +P
Sbjct: 36 SWMFWAMLP--PPPPPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQP 91
Query: 675 PLSSEAP 695
P +++P
Sbjct: 92 PFDAQSP 98
>AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 35.1 bits (77), Expect = 0.35
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = +3
Query: 495 SHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP 674
S +W P PPL S L + P S QPP P P P+ + PG +P
Sbjct: 36 SWMFWAMLP--PPPPPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQP 91
Query: 675 PLSSEAP 695
P +++P
Sbjct: 92 PFDAQSP 98
>U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.46
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 728
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPP 223
Query: 729 AKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPLIEXVXMAQTSH 869
+ P D SQ + P + S ++ V + H
Sbjct: 224 PAYMPPDDQMGQDNSQPMDTSNNMIPQIMPSISSRDVQPVAYEEPKH 270
>CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.46
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 728
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSAYPNSPASSGPGSPFQLPADTPP 223
Query: 729 AKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPLIEXVXMAQTSH 869
+ P D SQ + P + S ++ V + H
Sbjct: 224 PAYMPPDDQMGQDNSQPMDTSNNMIPQIMPSISSRDVQPVAYEEPKH 270
>BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5
protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.46
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 728
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPP 223
Query: 729 AKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPLIEXVXMAQTSH 869
+ P D SQ + P + S ++ V + H
Sbjct: 224 PAYMPPDDQMGQDNSQPMDTSNNMIPQIMPSISSRDVQPVAYEEPKH 270
>AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting
protein 1 protein.
Length = 495
Score = 34.7 bits (76), Expect = 0.46
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 537 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAP 695
PPL S L + P S QPP P P P+ + PG +PP +++P
Sbjct: 48 PPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.46
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 728
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPP 223
Query: 729 AKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPLIEXVXMAQTSH 869
+ P D SQ + P + S ++ V + H
Sbjct: 224 PAYMPPDDQMGQDNSQPMDTSNNMIPQIMPSISSRDVQPVAYEEPKH 270
>AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein.
Length = 462
Score = 34.7 bits (76), Expect = 0.46
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 728
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 163 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPP 220
Query: 729 AKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPLIEXVXMAQTSH 869
+ P D SQ + P + S ++ V + H
Sbjct: 221 PAYMPPDDQMGQDNSQPMDTSNNMIPQIMPSISSRDVQPVAYEEPKH 267
>AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 34.7 bits (76), Expect = 0.46
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 728
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPP 223
Query: 729 AKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPLIEXVXMAQTSH 869
+ P D SQ + P + S ++ V + H
Sbjct: 224 PAYMPPDDQMGQDNSQPMDTSNNMIPQIMPSISSRDVQPVAYEEPKH 270
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 465 SQCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 605
S C G PF S+ S P++S HP + +H Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 537 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAY-LTP 713
PPL + L P +P+S+ PP P P +P T PG P L AP + P
Sbjct: 235 PPLMNGL-PPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG-PPQLPPPAPGVHPPAP 292
Query: 714 SSLGMAKGVSPP 749
A GV PP
Sbjct: 293 VVHPPASGVHPP 304
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 537 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAY-LTP 713
PPL + L P +P+S+ PP P P +P T PG P L AP + P
Sbjct: 235 PPLMNGL-PPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG-PPQLPPPAPGVHPPAP 292
Query: 714 SSLGMAKGVSPP 749
A GV PP
Sbjct: 293 VVHPPASGVHPP 304
>BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 537 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAY-LTP 713
PPL + L P +P+S+ PP P P +P T PG P L AP + P
Sbjct: 235 PPLMNGL-PPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG-PPQLPPPAPGVHPPAP 292
Query: 714 SSLGMAKGVSPP 749
A GV PP
Sbjct: 293 VVHPPASGVHPP 304
>BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 537 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAY-LTP 713
PPL + L P +P+S+ PP P P +P T PG P L AP + P
Sbjct: 235 PPLMNGL-PPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG-PPQLPPPAPGVHPPAP 292
Query: 714 SSLGMAKGVSPP 749
A GV PP
Sbjct: 293 VVHPPASGVHPP 304
>AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 537 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAY-LTP 713
PPL + L P +P+S+ PP P P +P T PG P L AP + P
Sbjct: 235 PPLMNGL-PPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG-PPQLPPPAPGVHPPAP 292
Query: 714 SSLGMAKGVSPP 749
A GV PP
Sbjct: 293 VVHPPASGVHPP 304
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ30019 fis, clone 3NB692000545. ).
Length = 262
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 594 QPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSL 722
+PP + PFP +P +P FAP L+PP +AP + P L
Sbjct: 85 RPPSS--PFPPVPGSP----FAPSLRPPAWMDAPRLPVRPGVL 121
>X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein.
Length = 703
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 540 PLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSS 719
P + L QP +P P QT P P+ P +PG PP AP+ + P
Sbjct: 568 PPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGV 627
Query: 720 LGMAKGVSPPY 752
+ S PY
Sbjct: 628 MNFG-NPSYPY 637
>BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 540 PLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSS 719
P + L QP +P P QT P P+ P +PG PP AP+ + P
Sbjct: 568 PPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGV 627
Query: 720 LGMAKGVSPPY 752
+ S PY
Sbjct: 628 MNFG-NPSYPY 637
>BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 30.7 bits (66), Expect = 7.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 540 PLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSS 719
P + L QP +P P QT P P+ P +PG PP AP+ + P
Sbjct: 568 PPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGV 627
Query: 720 LGMAKGVSPPY 752
+ S PY
Sbjct: 628 MNFG-NPSYPY 637
>BC036444-1|AAH36444.1| 697|Homo sapiens cytoplasmic
polyadenylation element binding protein 3 protein.
Length = 697
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Frame = +3
Query: 672 PPLSSEAPSAYLTPS-----SLGMAKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPL 836
PP AP A L+PS S G V +FQ + L + P+
Sbjct: 92 PPQEPAAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTF 151
Query: 837 IEXVXMAQTSHHR 875
+ +AQT HH+
Sbjct: 152 SPQIGLAQTQHHQ 164
>AL365398-3|CAI14105.1| 684|Homo sapiens cytoplasmic
polyadenylation element binding protein 3 protein.
Length = 684
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Frame = +3
Query: 672 PPLSSEAPSAYLTPS-----SLGMAKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPL 836
PP AP A L+PS S G V +FQ + L + P+
Sbjct: 92 PPQEPAAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTF 151
Query: 837 IEXVXMAQTSHHR 875
+ +AQT HH+
Sbjct: 152 SPQIGLAQTQHHQ 164
>AL365398-2|CAI14104.1| 698|Homo sapiens cytoplasmic
polyadenylation element binding protein 3 protein.
Length = 698
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Frame = +3
Query: 672 PPLSSEAPSAYLTPS-----SLGMAKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPL 836
PP AP A L+PS S G V +FQ + L + P+
Sbjct: 92 PPQEPAAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTF 151
Query: 837 IEXVXMAQTSHHR 875
+ +AQT HH+
Sbjct: 152 SPQIGLAQTQHHQ 164
>AL158040-5|CAI13637.1| 684|Homo sapiens cytoplasmic
polyadenylation element binding protein 3 protein.
Length = 684
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Frame = +3
Query: 672 PPLSSEAPSAYLTPS-----SLGMAKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPL 836
PP AP A L+PS S G V +FQ + L + P+
Sbjct: 92 PPQEPAAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTF 151
Query: 837 IEXVXMAQTSHHR 875
+ +AQT HH+
Sbjct: 152 SPQIGLAQTQHHQ 164
>AL158040-4|CAI13636.1| 698|Homo sapiens cytoplasmic
polyadenylation element binding protein 3 protein.
Length = 698
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Frame = +3
Query: 672 PPLSSEAPSAYLTPS-----SLGMAKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPL 836
PP AP A L+PS S G V +FQ + L + P+
Sbjct: 92 PPQEPAAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTF 151
Query: 837 IEXVXMAQTSHHR 875
+ +AQT HH+
Sbjct: 152 SPQIGLAQTQHHQ 164
>AB023157-1|BAA76784.2| 699|Homo sapiens KIAA0940 protein protein.
Length = 699
Score = 30.3 bits (65), Expect = 9.9
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Frame = +3
Query: 672 PPLSSEAPSAYLTPS-----SLGMAKGVSPPYFQVNDESQASRLIXVIHAYSXPLLQSPL 836
PP AP A L+PS S G V +FQ + L + P+
Sbjct: 107 PPQEPAAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTF 166
Query: 837 IEXVXMAQTSHHR 875
+ +AQT HH+
Sbjct: 167 SPQIGLAQTQHHQ 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,590,549
Number of Sequences: 237096
Number of extensions: 2788299
Number of successful extensions: 7394
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 6724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7385
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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