Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_F11
(895 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 34 0.23
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 34 0.30
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 34 0.30
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 34 0.30
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 34 0.30
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 34 0.30
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 34 0.30
AY052064-1|AAK93488.1| 292|Drosophila melanogaster LP10580p pro... 33 0.53
AE013599-2088|AAF58117.1| 557|Drosophila melanogaster CG8205-PA... 33 0.53
AE013599-2087|AAM70980.1| 891|Drosophila melanogaster CG8205-PC... 33 0.53
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr... 33 0.70
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p... 33 0.70
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB... 33 0.70
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ... 29 8.6
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA... 29 8.6
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 34.3 bits (75), Expect = 0.23
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMA 731
R P Q P S+H P + P S P T PG PP ++P A+ T G+A
Sbjct: 1142 RTSSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 732 KGVSPP 749
PP
Sbjct: 1200 GSGPPP 1205
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 33.9 bits (74), Expect = 0.30
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMA 731
R P Q P S+H P + P S P T PG PP ++P A+ T G+A
Sbjct: 310 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 367
Query: 732 KGVSPP 749
PP
Sbjct: 368 GSGPPP 373
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 33.9 bits (74), Expect = 0.30
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMA 731
R P Q P S+H P + P S P T PG PP ++P A+ T G+A
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 732 KGVSPP 749
PP
Sbjct: 1200 GSGPPP 1205
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 33.9 bits (74), Expect = 0.30
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMA 731
R P Q P S+H P + P S P T PG PP ++P A+ T G+A
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 732 KGVSPP 749
PP
Sbjct: 1200 GSGPPP 1205
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 33.9 bits (74), Expect = 0.30
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMA 731
R P Q P S+H P + P S P T PG PP ++P A+ T G+A
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 732 KGVSPP 749
PP
Sbjct: 1200 GSGPPP 1205
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 33.9 bits (74), Expect = 0.30
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMA 731
R P Q P S+H P + P S P T PG PP ++P A+ T G+A
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 732 KGVSPP 749
PP
Sbjct: 1200 GSGPPP 1205
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 33.9 bits (74), Expect = 0.30
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +3
Query: 552 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMA 731
R P Q P S+H P + P S P T PG PP ++P A+ T G+A
Sbjct: 1142 RTPSPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199
Query: 732 KGVSPP 749
PP
Sbjct: 1200 GSGPPP 1205
>AY052064-1|AAK93488.1| 292|Drosophila melanogaster LP10580p
protein.
Length = 292
Score = 33.1 bits (72), Expect = 0.53
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Frame = +3
Query: 504 YWRSRPYASSHPPLRS--RLHQPDHQIPDSIHQP-PQT*HPFPSIP*TPYXKEFAPGLKP 674
Y + P H PL + R H H P S P P P+PS P +P PG
Sbjct: 126 YGAAPPPPPPHTPLLATPRSHHHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQPGAHS 185
Query: 675 PLSSEAPSAYLTPSSL 722
P + P + PS L
Sbjct: 186 PSQAMYPLDFFPPSPL 201
>AE013599-2088|AAF58117.1| 557|Drosophila melanogaster CG8205-PA,
isoform A protein.
Length = 557
Score = 33.1 bits (72), Expect = 0.53
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Frame = +3
Query: 504 YWRSRPYASSHPPLRS--RLHQPDHQIPDSIHQP-PQT*HPFPSIP*TPYXKEFAPGLKP 674
Y + P H PL + R H H P S P P P+PS P +P PG
Sbjct: 349 YGAAPPPPPPHTPLLATPRSHHHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQPGAHS 408
Query: 675 PLSSEAPSAYLTPSSL 722
P + P + PS L
Sbjct: 409 PSQAMYPLDFFPPSPL 424
>AE013599-2087|AAM70980.1| 891|Drosophila melanogaster CG8205-PC,
isoform C protein.
Length = 891
Score = 33.1 bits (72), Expect = 0.53
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Frame = +3
Query: 504 YWRSRPYASSHPPLRS--RLHQPDHQIPDSIHQP-PQT*HPFPSIP*TPYXKEFAPGLKP 674
Y + P H PL + R H H P S P P P+PS P +P PG
Sbjct: 683 YGAAPPPPPPHTPLLATPRSHHHPHHHPASAFYPAPLVYWPYPSPPVSPTTYYSQPGAHS 742
Query: 675 PLSSEAPSAYLTPSSL 722
P + P + PS L
Sbjct: 743 PSQAMYPLDFFPPSPL 758
>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
protein.
Length = 2176
Score = 32.7 bits (71), Expect = 0.70
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = +3
Query: 519 PYASSHPPLRSRLHQPDHQIPDSIHQ---PPQT*HPFPSIP*TPYXKEFAPGLKPPLSSE 689
P ++ PP L +P ++ PP T P P+IP TP + A L PP S
Sbjct: 912 PATTTPPPSPPSLATETPTLPPTLPPVTLPPVT-QPPPTIPPTPPSTQSAQTLPPPTS-- 968
Query: 690 APSAYLTPSSLGMAKGVSPPYFQVNDESQASRLI 791
A + Y TP A P + ++E + + +
Sbjct: 969 AINVYTTPDGPPTASQTKPSVTESSEEVEGTNTV 1002
>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
protein.
Length = 2165
Score = 32.7 bits (71), Expect = 0.70
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = +3
Query: 519 PYASSHPPLRSRLHQPDHQIPDSIHQ---PPQT*HPFPSIP*TPYXKEFAPGLKPPLSSE 689
P ++ PP L +P ++ PP T P P+IP TP + A L PP S
Sbjct: 901 PATTTPPPSPPSLATETPTLPPTLPPVTLPPVT-QPPPTIPPTPPSTQSAQTLPPPTS-- 957
Query: 690 APSAYLTPSSLGMAKGVSPPYFQVNDESQASRLI 791
A + Y TP A P + ++E + + +
Sbjct: 958 AINVYTTPDGPPTASQTKPSVTESSEEVEGTNTV 991
>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
protein.
Length = 1984
Score = 32.7 bits (71), Expect = 0.70
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = +3
Query: 519 PYASSHPPLRSRLHQPDHQIPDSIHQ---PPQT*HPFPSIP*TPYXKEFAPGLKPPLSSE 689
P ++ PP L +P ++ PP T P P+IP TP + A L PP S
Sbjct: 705 PATTTPPPSPPSLATETPTLPPTLPPVTLPPVT-QPPPTIPPTPPSTQSAQTLPPPTS-- 761
Query: 690 APSAYLTPSSLGMAKGVSPPYFQVNDESQASRLI 791
A + Y TP A P + ++E + + +
Sbjct: 762 AINVYTTPDGPPTASQTKPSVTESSEEVEGTNTV 795
>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
initiation factoreIF4G protein.
Length = 1666
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 231 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612
>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
protein.
Length = 1345
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 231 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,763,735
Number of Sequences: 53049
Number of extensions: 856942
Number of successful extensions: 3054
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3048
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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