Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_F02
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.008
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.008
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.008
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.098
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.098
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.69
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.69
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.69
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.2
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 30 1.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 2.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 2.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 27 3.2
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 28 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -2
Query: 774 PPPPPXXXXXGGXXXXXXXXXXXXXXGXXPPPPPXXGGXXPXXGGEXXXXXPP 616
PPPPP G PPPPP GG P GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 775 PPPPPXXXXXGGXXXXXXXXXXXXXXGGXXPPPPXGGGXXXPXGGGXXXXXPP 617
PPPP GG GG PPPP GG P GG PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG--LPPISGGPPPPPPP 764
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = -2
Query: 774 PPPPPXXXXX--GGXXXXXXXXXXXXXXGXXPPPPPXXGGXXP 652
PPPPP GG G PPPPP GG P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 770 PPPXXXXXGGXXPXXXXXXXXXXXGGXXPPPPXG 669
PPP GG P GG PPPP G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 640 PPXXGXXPPXPXGGGGXXPPXXXXXXXXXXXGXXPP 747
PP G PP P GG PP G PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 775 PPPPPXXXXXGGXXXXXXXXXXXXXXGGXXPPPPXG 668
PPPPP GG GG PPPP G
Sbjct: 758 PPPPPPPP--GGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -2
Query: 774 PPPPPXXXXXGGXXXXXXXXXXXXXXGXXPPPPPXXGGXXPXXGGEXXXXXPP 616
PPPPP G PPPPP GG P GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 775 PPPPPXXXXXGGXXXXXXXXXXXXXXGGXXPPPPXGGGXXXPXGGGXXXXXPP 617
PPPP GG GG PPPP GG P GG PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG--LPPISGGPPPPPPP 764
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = -2
Query: 774 PPPPPXXXXX--GGXXXXXXXXXXXXXXGXXPPPPPXXGGXXP 652
PPPPP GG G PPPPP GG P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 770 PPPXXXXXGGXXPXXXXXXXXXXXGGXXPPPPXG 669
PPP GG P GG PPPP G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 640 PPXXGXXPPXPXGGGGXXPPXXXXXXXXXXXGXXPP 747
PP G PP P GG PP G PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 775 PPPPPXXXXXGGXXXXXXXXXXXXXXGGXXPPPPXG 668
PPPPP GG GG PPPP G
Sbjct: 758 PPPPPPPP--GGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -2
Query: 774 PPPPPXXXXXGGXXXXXXXXXXXXXXGXXPPPPPXXGGXXPXXGGEXXXXXPP 616
PPPPP G PPPPP GG P GG PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 775 PPPPPXXXXXGGXXXXXXXXXXXXXXGGXXPPPPXGGGXXXPXGGGXXXXXPP 617
PPPP GG GG PPPP GG P GG PP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG--LPPISGGPPPPPPP 347
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = -2
Query: 774 PPPPPXXXXX--GGXXXXXXXXXXXXXXGXXPPPPPXXGGXXP 652
PPPPP GG G PPPPP GG P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 770 PPPXXXXXGGXXPXXXXXXXXXXXGGXXPPPPXG 669
PPP GG P GG PPPP G
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 640 PPXXGXXPPXPXGGGGXXPPXXXXXXXXXXXGXXPP 747
PP G PP P GG PP G PP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 775 PPPPPXXXXXGGXXXXXXXXXXXXXXGGXXPPPPXG 668
PPPPP GG GG PPPP G
Sbjct: 341 PPPPPPPP--GGCPPPPPPPPPGGFKGGPPPPPPPG 374
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.098
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -2
Query: 774 PPPPPXXXXXGGXXXXXXXXXXXXXXGXXPPPPPXXGGXXPXXGGEXXXXXPP 616
PPPPP GG G PPPPP P G PP
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.098
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -2
Query: 774 PPPPPXXXXXGGXXXXXXXXXXXXXXGXXPPPPPXXGGXXPXXGGEXXXXXPP 616
PPPPP GG G PPPPP P G PP
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 775 PPPPPXXXXXGGXXXXXXXXXXXXXXGGXXPPPPXGGGXXXPXGGGXXXXXPP 617
PPPPP G G PPPP GG P G PP
Sbjct: 255 PPPPPA----AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 639 PPPXGXXXPPPXGGGGXXPP 698
PPP PPP GG PP
Sbjct: 273 PPPPTGSPPPPPAGGSPPPP 292
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 639 PPPXGXXXPPPXGGGGXXPP 698
PPP G PPP G PP
Sbjct: 282 PPPAGGSPPPPRAGSPPPPP 301
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 639 PPPXGXXXPPPXGGGGXXPP 698
PPP PPP G G PP
Sbjct: 313 PPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 775 PPPPPXXXXXGGXXXXXXXXXXXXXXGGXXPPPPXGGGXXXPXGGGXXXXXPP 617
PPPPP G G PPPP GG P G PP
Sbjct: 276 PPPPPA----AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 639 PPPXGXXXPPPXGGGGXXPP 698
PPP PPP GG PP
Sbjct: 294 PPPPTGSPPPPPAGGSPPPP 313
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 639 PPPXGXXXPPPXGGGGXXPP 698
PPP G PPP G PP
Sbjct: 303 PPPAGGSPPPPRAGSPPPPP 322
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 639 PPPXGXXXPPPXGGGGXXPP 698
PPP PPP G G PP
Sbjct: 334 PPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -1
Query: 775 PPPPPXXXXXGGXXXXXXXXXXXXXXGGXXPPPPXGGGXXXPXGGGXXXXXPP 617
PPPPP G G PPPP GG P G PP
Sbjct: 261 PPPPPA----AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 639 PPPXGXXXPPPXGGGGXXPP 698
PPP PPP GG PP
Sbjct: 279 PPPPTGSPPPPPAGGSPPPP 298
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 639 PPPXGXXXPPPXGGGGXXPP 698
PPP G PPP G PP
Sbjct: 288 PPPAGGSPPPPRAGSPPPPP 307
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 639 PPPXGXXXPPPXGGGGXXPP 698
PPP PPP G G PP
Sbjct: 319 PPPQAGGSPPPAGTGSPPPP 338
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = +3
Query: 639 PPPXGXXXPP--PXGGGGXXPP 698
PPP G PP P GGGG PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +1
Query: 625 GXXXFPPXXGXXPPX--PXGGGGXXPP 699
G PP G PP P GGGG PP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = +3
Query: 639 PPPXGXXXPP--PXGGGGXXPP 698
PPP G PP P GGGG PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +1
Query: 625 GXXXFPPXXGXXPPX--PXGGGGXXPP 699
G PP G PP P GGGG PP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = +3
Query: 639 PPPXGXXXPP--PXGGGGXXPP 698
PPP G PP P GGGG PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +1
Query: 625 GXXXFPPXXGXXPPX--PXGGGGXXPP 699
G PP G PP P GGGG PP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = +3
Query: 639 PPPXGXXXPP--PXGGGGXXPP 698
PPP G PP P GGGG PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +1
Query: 625 GXXXFPPXXGXXPPX--PXGGGGXXPP 699
G PP G PP P GGGG PP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPP 811
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 371 NXXPXGLHKVSGXPXKXSSPHXPVXFPKLKSVCRSKFNLKILAQXXXK 228
N G +G P +SP PV PK+ +V SKF + + AQ K
Sbjct: 439 NPGGEGSENATGKPSSPTSPPKPVEKPKIATVQESKF-VSVAAQNYRK 485
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -3
Query: 773 PPPPXXXXXGGXXPXXXXXXXXXXXGGXXPPPPXGXGGXXPXXGGXXXXPTP 618
PPPP GG GG PPPP G G P G P
Sbjct: 411 PPPP-----GGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAP 457
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -1
Query: 772 PPPPXXXXXGGXXXXXXXXXXXXXXGGXXPPPPXGGGXXXPXGGGXXXXXPP 617
PPPP GG GG PPPP G G P G P
Sbjct: 411 PPPP-----GGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAP 457
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -1
Query: 775 PPPPPXXXXXGGXXXXXXXXXXXXXXGGXXPPPPXGGGXXXP 650
PPPPP GG PPPP GG P
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGP 602
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 26.6 bits (56), Expect(2) = 3.2
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 661 PPXPXGGGGXXPPXXXXXXXXXXXGXXPPXXXXXGGGG 774
PP P GG PP G PP GGG
Sbjct: 771 PPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGG 808
Score = 21.0 bits (42), Expect(2) = 3.2
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 625 GXXXFPPXXGXXPPXPXG 678
G PP G PP P G
Sbjct: 714 GYPPAPPPPGVGPPPPQG 731
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 328 PXVPAPIXPXGFPN-SSRFVDPNSI 257
P VP P+ P GF N SS F+ +S+
Sbjct: 4101 PVVPPPLPPRGFRNDSSNFISTSSV 4125
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 328 PXVPAPIXPXGFPN-SSRFVDPNSI 257
P VP P+ P GF N SS F+ +S+
Sbjct: 4101 PVVPPPLPPRGFRNDSSNFISTSSV 4125
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 328 PXVPAPIXPXGFPN-SSRFVDPNSI 257
P VP P+ P GF N SS F+ +S+
Sbjct: 4101 PVVPPPLPPRGFRNDSSNFISTSSV 4125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,938,089
Number of Sequences: 27780
Number of extensions: 300565
Number of successful extensions: 1321
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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