Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_E24
(824 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC054516-1|AAH54516.1| 666|Homo sapiens amyloid beta (A4) precu... 31 5.1
AY152730-1|AAN75525.1| 665|Homo sapiens Rap1-interacting adapto... 31 5.1
AL160287-2|CAH70339.1| 666|Homo sapiens amyloid beta (A4) precu... 31 5.1
AB085852-1|BAC41256.1| 666|Homo sapiens proline-rich protein 73... 31 5.1
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 31 6.7
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 31 6.7
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 31 6.7
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 31 6.7
D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternativel... 31 6.7
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 31 6.7
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 31 6.7
BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein. 31 6.7
BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein. 31 6.7
BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein. 31 6.7
BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger ... 31 6.7
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 31 6.7
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 31 6.7
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 30 8.8
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 30 8.8
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 30 8.8
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 30 8.8
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 30 8.8
>BC054516-1|AAH54516.1| 666|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1
interacting pro protein.
Length = 666
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Frame = +2
Query: 485 GXPLIPXXLKFGGGX----PPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G P P K GG PP F PPPP PP P PPP
Sbjct: 530 GSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDFMEPPPDFVPPPPP 588
>AY152730-1|AAN75525.1| 665|Homo sapiens Rap1-interacting adaptor
molecule protein.
Length = 665
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Frame = +2
Query: 485 GXPLIPXXLKFGGGX----PPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G P P K GG PP F PPPP PP P PPP
Sbjct: 530 GSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDFMEPPPDFVPPPPP 588
>AL160287-2|CAH70339.1| 666|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1
interacting pro protein.
Length = 666
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Frame = +2
Query: 485 GXPLIPXXLKFGGGX----PPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G P P K GG PP F PPPP PP P PPP
Sbjct: 530 GSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDFMEPPPDFVPPPPP 588
>AB085852-1|BAC41256.1| 666|Homo sapiens proline-rich protein 73
protein.
Length = 666
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Frame = +2
Query: 485 GXPLIPXXLKFGGGX----PPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G P P K GG PP F PPPP PP P PPP
Sbjct: 530 GSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDFMEPPPDFVPPPPP 588
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 521 GGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G PP PPPP P G PP PP PPP
Sbjct: 468 GMMPPPPMGMMPPPP-PPPSGQPPPPPSGPLPPWQQQQQQPPP 509
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 521 GGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G PP PPPP P G PP PP PPP
Sbjct: 468 GMMPPPPMGMMPPPP-PPPSGQPPPPPSGPLPPWQQQQQQPPP 509
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 521 GGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G PP PPPP P G PP PP PPP
Sbjct: 468 GMMPPPPMGMMPPPPPP-PSGQPPPPPSGPLPPWQQQQQQPPP 509
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 521 GGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G PP PPPP P G PP PP PPP
Sbjct: 468 GMMPPPPMGMMPPPPPP-PSGQPPPPPSGPLPPWQQQQQQPPP 509
>D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternatively
spliced product protein.
Length = 548
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 521 GGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G PP PPPP P G PP PP PPP
Sbjct: 468 GMMPPPPMGMMPPPPPP-PSGQPPPPPSGPLPPWQQQQQQPPP 509
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 530 PPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
PP PPPP P G PP PP PPP
Sbjct: 51 PPFGMMRGPPPPPRPPFGR--PPFDPNMPPMPPPGGIPPP 88
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 521 GGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G PP PPPP P G PP PP PPP
Sbjct: 593 GMMPPPPMGMMPPPPPP-PSGQPPPPPSGPLPPWQQQQQQPPP 634
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 530 PPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
PP PPPP P + PP PP P P
Sbjct: 77 PPPPQQPPPPPPPPSPGASYPPPQPPPPPPLYQRVSPPQP 116
>BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 521 GGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G PP PPPP P G PP PP PPP
Sbjct: 468 GMMPPPPMGMMPPPPPP-PSGQPPPPPSGPLPPWQQQQQQPPP 509
>BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 521 GGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G PP PPPP P G PP PP PPP
Sbjct: 468 GMMPPPPMGMMPPPPPP-PSGQPPPPPSGPLPPWQQQQQQPPP 509
>BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 521 GGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G PP PPPP P G PP PP PPP
Sbjct: 468 GMMPPPPMGMMPPPPPP-PSGQPPPPPSGPLPPWQQQQQQPPP 509
>BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger
protein 162 protein.
Length = 265
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 521 GGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
G PP PPPP P G PP PP PPP
Sbjct: 94 GMMPPPPMGMMPPPP-PPPSGQPPPPPSGPLPPWQQQQQQPPP 135
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 530 PPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
PP PPPP P G PP PP PPP
Sbjct: 51 PPFGMMRGPPPPPRPPFGR--PPFDPNMPPMPPPGGIPPP 88
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 530 PPXXF*XXPPPPXXKPXGXFXPPXXXXXPPXXXXXXXPPP 649
PP PPPP P G PP PP PPP
Sbjct: 55 PPFGMMRGPPPPPRPPFGR--PPFDPNMPPMPPPGGIPPP 92
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +2
Query: 479 GWGXPLIPXXLKFGGGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPP 619
G+G P P + G PP F PP P P PP PP
Sbjct: 302 GYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 348
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +2
Query: 479 GWGXPLIPXXLKFGGGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPP 619
G+G P P + G PP F PP P P PP PP
Sbjct: 302 GYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 348
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +2
Query: 479 GWGXPLIPXXLKFGGGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPP 619
G+G P P + G PP F PP P P PP PP
Sbjct: 229 GYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 275
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +2
Query: 479 GWGXPLIPXXLKFGGGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPP 619
G+G P P + G PP F PP P P PP PP
Sbjct: 339 GYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 385
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +2
Query: 479 GWGXPLIPXXLKFGGGXPPXXF*XXPPPPXXKPXGXFXPPXXXXXPP 619
G+G P P + G PP F PP P P PP PP
Sbjct: 302 GYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 348
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,785,642
Number of Sequences: 237096
Number of extensions: 2106745
Number of successful extensions: 9924
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8553
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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