Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_E21
         (868 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        24   1.6  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   4.8  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   6.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   8.4  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   8.4  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   8.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   8.4  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   8.4  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
 Frame = -3

Query: 440 CPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAG-VLNGDERFRHVTTLH 264
           C  +P   S+ + L+   +  +  +   Q NSP  +   P H+G   +     R  ++++
Sbjct: 30  CTTSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTSPAARTTSSMY 89

Query: 263 AWNETPCARRYYRPRTASA 207
            +     A  +++ + A A
Sbjct: 90  PYVSAAAAHHHHQQQQAVA 108


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 815 RPFGRVHEPNVRNCGSSRTEQYY 747
           R FG V E N++   +  TE+YY
Sbjct: 100 RHFGIVGECNIQYALNPNTEEYY 122


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 158 SSLKNHYFHCFITYSVGRK 214
           SS    +FHC+     GRK
Sbjct: 420 SSFFQQFFHCYCPVRFGRK 438


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 823 RTTGRSAECMNQMSETAVXLVLSS 752
           +  G+  +C N MSE  V ++L +
Sbjct: 170 KENGKEFDCHNYMSELTVDILLET 193


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 721 GKTNLSHDGXNPAHVPF*WVNNPTLG 644
           GK N      +PA  PF W ++ + G
Sbjct: 404 GKENYQTMSRDPARTPFQWDDSVSAG 429


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 137 VGDRFARSSLKNHYFHCFI 193
           + +  A   L+N Y+ CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 137 VGDRFARSSLKNHYFHCFI 193
           + +  A   L+N Y+ CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 721 GKTNLSHDGXNPAHVPF*WVNNPTLG 644
           GK N      +PA  PF W ++ + G
Sbjct: 404 GKENYQTMSRDPARTPFQWDDSVSAG 429


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 165 SDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSP 55
           +D R   SP   TP+ + Y   +E+ +  S F  D+P
Sbjct: 21  NDKRIYLSPR--TPIKNVYKNNIETKNQLSPFNIDTP 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,800
Number of Sequences: 438
Number of extensions: 5530
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)