Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_E08
(849 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 59 4e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 58 1e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 58 1e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 58 1e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 57 2e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 57 2e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 5e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 5e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 52 5e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 51 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 5e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 41 1e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 2e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 37 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 37 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.002
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.010
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 31 0.010
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.018
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.12
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 22 8.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.2
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 63.7 bits (148), Expect = 2e-12
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Frame = +2
Query: 179 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 352
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 353 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 520
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 521 XFGSRMHNSDEXDXVIDXR-----IYSMXESGAWDVTDL 622
FGS N D+ + + +SG WD+ ++
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINV 206
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.9 bits (141), Expect = 1e-11
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Frame = +2
Query: 131 STRSSQRTIGSLPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 310
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 311 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 484
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 485 DNWPNDMQTCTFXFGSRMHNSDEXDXVI 568
+P D Q C FGS ++ ++ D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.9 bits (141), Expect = 1e-11
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Frame = +2
Query: 131 STRSSQRTIGSLPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 310
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 311 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 484
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 485 DNWPNDMQTCTFXFGSRMHNSDEXDXVI 568
+P D Q C FGS ++ ++ D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 391
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEXDXVI 568
G Y V++NGS ++ + + + +P D Q C FGS ++ ++ D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 59.3 bits (137), Expect = 4e-11
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 391
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEXDXVI 568
G Y V+++GS ++ + M + +P D Q C FGS ++ ++ D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 391
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEXDXVI 568
G Y V+++GS ++ + M + +P D Q C FGS ++ ++ D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.4 bits (135), Expect = 8e-11
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +2
Query: 260 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 433
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 434 VSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEXD 559
V W + + ++ +P D QTC FGS ++ + D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 391
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEXDXVI 568
G Y V+++GS ++ + + + +P D Q C FGS ++ ++ D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.0 bits (134), Expect = 1e-10
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Frame = +2
Query: 179 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 352
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 353 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFG 529
PD+VL N A A +A + + G V W + + ++ +P D QTC FG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 530 SRMHNSDEXD 559
S ++ + D
Sbjct: 173 SWTYDGFKVD 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 58.0 bits (134), Expect = 1e-10
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = +2
Query: 260 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 424
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 425 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEXD 559
G VSW + + ++ +P D Q+C FGS +N + D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 391
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEXDXVI 568
G Y V+++GS ++ + + + +P D Q C FGS ++ ++ D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 391
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEXDXVI 568
G Y V+++GS ++ + + + +P D Q C FGS ++ ++ D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 57.6 bits (133), Expect = 1e-10
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Frame = +2
Query: 179 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 349
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 350 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 520
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 521 XFGSRMHNSDEXDXVIDXRIYSM---XESGAWD 610
FGS +H+ +E + +D + + M + WD
Sbjct: 186 NFGSWVHSGEEVNIFLDKKGFHMDGYTNNSKWD 218
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 57.2 bits (132), Expect = 2e-10
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Frame = +2
Query: 146 QRTIGSLPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTW 325
+R +G+ + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 326 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 499
L + RLW+PDV++ N+A G Y V NNG+ ++ + + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 500 DMQTCTFXFGSRMHNSDEXDXVIDXR----IYSMXESGAWDV 613
D Q C FGS ++ + D + I S +G WD+
Sbjct: 158 DDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.8 bits (131), Expect = 2e-10
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Frame = +2
Query: 182 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 349
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 350 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXF 526
PD+VL N A G + +A + G V W + + + +P D QTC F
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 527 GSRMHNSDEXD 559
GS ++ + D
Sbjct: 164 GSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.6 bits (128), Expect = 5e-10
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Frame = +2
Query: 179 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 352
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 353 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 520
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 521 XFGSRMHNSDEXD 559
GS ++ + D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.4 bits (120), Expect = 5e-09
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Frame = +2
Query: 221 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 391
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 392 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGS 532
R+ +G V + RL I M L+N+P D Q C FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 52.4 bits (120), Expect = 5e-09
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Frame = +2
Query: 149 RTIGSLPPDSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 322
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 323 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDN 490
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 491 WPNDMQTCTFXFGS 532
+P D QTC FGS
Sbjct: 152 FPFDEQTCFMKFGS 165
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +2
Query: 182 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 358
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 359 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGS 532
+L N A + VS+ G V W+ + + ++ +P D Q C + S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 49.2 bits (112), Expect = 5e-08
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +2
Query: 263 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGS 433
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 434 VSWIKRLDISTPISMQLDNWPNDMQTCTFXFGS 532
+ + RL I M+L N+P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 49.2 bits (112), Expect = 5e-08
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Frame = +2
Query: 188 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 364
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 365 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMQTCTFXFGS 532
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 533 RMHNSDE 553
H S+E
Sbjct: 180 WSHGSNE 186
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.0 bits (99), Expect = 2e-06
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Frame = +2
Query: 149 RTIGSLPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCS 319
R G D +V + L +R A I + + + + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 320 TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDN 490
T L + R+W PD+ N + + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 491 WPNDMQTCTFXFGSRMHNSDE 553
+P D Q C+ S +D+
Sbjct: 167 YPLDRQVCSLRMASYGWTTDD 187
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.1 bits (92), Expect = 1e-05
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Frame = +2
Query: 149 RTIGSLPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCS 319
R G D VV + + +R + I + + + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 320 TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDN 490
T L + R+W PD+ N + + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 491 WPNDMQTCTFXFGSRMHNSDE 553
+P D Q C+ S +D+
Sbjct: 167 YPLDRQVCSLRMASYGWTTDD 187
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.3 bits (90), Expect = 2e-05
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 221 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 400
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 401 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 517
R R+S +GSV++ R + M L +P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.1 bits (82), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +2
Query: 272 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 424
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 425 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 514
+GS++ RL I+ M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.1 bits (82), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +2
Query: 272 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 424
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 425 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 514
+GS++ RL I+ M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.1 bits (82), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +2
Query: 272 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 424
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 425 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 514
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.002
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +2
Query: 131 STRSSQRTIGSLPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 304
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 305 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 478
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 479 QLDNWPNDMQTCTFXFGS 532
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.002
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +2
Query: 131 STRSSQRTIGSLPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 304
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 305 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 478
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 479 QLDNWPNDMQTCTFXFGS 532
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.002
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +2
Query: 131 STRSSQRTIGSLPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 304
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 305 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 478
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 479 QLDNWPNDMQTCTFXFGS 532
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 33.9 bits (74), Expect = 0.002
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Frame = +2
Query: 230 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 397
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 398 YALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDE 553
++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + +
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQD 159
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.010
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +2
Query: 344 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 514
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 515 TFXFGSRMHN 544
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.010
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 338 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 508
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 509 TCTFXFGSRMHNSDE 553
C S H +DE
Sbjct: 176 ECKLQMESLSHTTDE 190
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.7 bits (66), Expect = 0.018
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 182 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 355
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 356 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFXFG 529
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 530 S 532
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.12
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +2
Query: 182 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 343
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 344 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 508
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 509 TC 514
C
Sbjct: 129 IC 130
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 610 CDGSVHCGAXP 642
C SVHCG P
Sbjct: 16 CSPSVHCGTRP 26
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 325 PSAAAPFPCVPTQS 284
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,654
Number of Sequences: 438
Number of extensions: 4122
Number of successful extensions: 87
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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