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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_D21
         (864 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch...   161   1e-40
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy...   103   3e-23
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy...   101   2e-22
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy...    95   2e-20
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc...    93   5e-20
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac...    92   8e-20
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su...    87   4e-18
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha...    84   2e-17
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar...    82   9e-17
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar...    79   6e-16
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa...    77   2e-15
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom...    76   8e-15
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha...    74   2e-14
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy...    73   4e-14
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc...    71   2e-13
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch...    69   1e-12
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S...    68   2e-12
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy...    66   8e-12
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce...    64   2e-11
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy...    64   3e-11
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch...    64   3e-11
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha...    57   3e-09
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc...    53   5e-08
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        28   2.0  
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc...    27   2.6  
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ...    27   2.6  
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|...    27   4.5  
SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|c...    26   7.9  
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c...    26   7.9  

>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 754

 Score =  161 bits (391), Expect = 1e-40
 Identities = 78/158 (49%), Positives = 107/158 (67%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 463
           L+L PTREL  Q H+V  ++A F             +K QE  LR+ PDIVIATPGR ID
Sbjct: 334 LILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFID 393

Query: 464 HIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 643
           H+RN+  F + +IE++V+DEADRML++ FA+++ EII+ C   RQTMLFSATM+++V DL
Sbjct: 394 HMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLFSATMTDKVDDL 453

Query: 644 AAVSLKKPVKLFVNSNKEVAFNLRQEFVRIPKXRXCXR 757
             +SL +PV++FV++ K  A  L QEFVR+   R   R
Sbjct: 454 IRLSLNRPVRVFVDNKKTTAKLLTQEFVRVRPQRELLR 491



 Score = 70.5 bits (165), Expect = 3e-13
 Identities = 33/69 (47%), Positives = 46/69 (66%)
 Frame = +1

Query: 52  NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
           ++SF +MNLSRP++K + +L F  PT IQ  TIP+ALLGKD+             +++PI
Sbjct: 258 HSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPI 317

Query: 232 LERLLYKAK 258
           LERLLY+ K
Sbjct: 318 LERLLYRPK 326


>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 578

 Score =  103 bits (247), Expect = 3e-23
 Identities = 52/137 (37%), Positives = 88/137 (64%), Gaps = 1/137 (0%)
 Frame = +2

Query: 278 GXLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRL 457
           G +++ PTREL  Q+  V ++L ++            + + +   L +  ++++ATPGRL
Sbjct: 163 GVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAEADKLVKGVNLLVATPGRL 222

Query: 458 IDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC-SPKRQTMLFSATMSEEV 634
           +DH++NT  F   ++  LV+DEADR+L+  F ++M++I++   S  RQT+LFSAT + +V
Sbjct: 223 LDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTLLFSATQTTKV 282

Query: 635 KDLAAVSLKKPVKLFVN 685
           +DLA +SL KP  L+VN
Sbjct: 283 EDLARISL-KPGPLYVN 298



 Score = 36.3 bits (80), Expect = 0.006
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = +1

Query: 61  FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
           F ++ LS  + KAI  + F   T IQ  +IP  L G+DV             +++P +E 
Sbjct: 91  FSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIE- 149

Query: 241 LLYKAK 258
           +LY  K
Sbjct: 150 MLYALK 155


>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 465

 Score =  101 bits (241), Expect = 2e-22
 Identities = 52/151 (34%), Positives = 84/151 (55%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 463
           +VL PTREL  Q+      +               D+  Q   L + P +++ TPGRL+D
Sbjct: 118 VVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLMD 177

Query: 464 HIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 643
           H+ NT  F L +++ L++DEADR+LD  F   + +I++    +R+T+LFSATM+ +V+ L
Sbjct: 178 HLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKL 237

Query: 644 AAVSLKKPVKLFVNSNKEVAFNLRQEFVRIP 736
              SL +PV++ V+S       L Q ++  P
Sbjct: 238 QRASLHQPVRVAVSSKFSTVDTLIQRYLFFP 268



 Score = 34.7 bits (76), Expect = 0.017
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +1

Query: 58  SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
           +F  + +   L +A   L F  PTPIQ   IP+ L  +DV             + LP+++
Sbjct: 47  TFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQ 106

Query: 238 RL 243
            L
Sbjct: 107 EL 108


>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 735

 Score = 94.7 bits (225), Expect = 2e-20
 Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
 Frame = +2

Query: 278 GXLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRL 457
           G LV+ PTREL  Q      ++ +             + K ++  L +  +I++ TPGRL
Sbjct: 113 GALVISPTRELAIQTFETLVKIGRLHSFSAGLIIGGNNYKEEKERLSRM-NILVCTPGRL 171

Query: 458 IDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVK 637
           + HI    +F    +++L+LDEADR+LD  F   +  I+      RQTMLFSAT ++ VK
Sbjct: 172 LQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTMLFSATQTKSVK 231

Query: 638 DLAAVSLKKP--VKLFVNSNKEVAFNLRQEFVRIP 736
           DLA +SL+ P  + +  N       NL Q ++ +P
Sbjct: 232 DLARLSLQNPDFISVHENDTSSTPSNLNQFYLTVP 266


>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
           Prp11|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1014

 Score = 93.1 bits (221), Expect = 5e-20
 Identities = 57/156 (36%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
 Frame = +2

Query: 257 KEGTGSPGXLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIV 436
           K G G P  +++ PTREL  Q+    +   +              +K Q + L++  +IV
Sbjct: 487 KTGEG-PIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIV 545

Query: 437 IATPGRLIDHIRNTPS--FGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLF 610
           + TPGR+ID +         LH    LVLDEADRM D  F  Q+  II    P RQT+LF
Sbjct: 546 VCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLF 605

Query: 611 SATMSEEVKDLAAVSLKKPVKLFVNSNKEVAFNLRQ 718
           SAT    ++ LA   LKKPV++ V     VA  + Q
Sbjct: 606 SATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQ 641



 Score = 33.5 bits (73), Expect = 0.040
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +1

Query: 58  SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
           S+    LS   +  I SL +  PT IQA  IP    G+DV             ++LP+  
Sbjct: 419 SWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFR 478

Query: 238 RL 243
            +
Sbjct: 479 HI 480


>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 848

 Score = 92.3 bits (219), Expect = 8e-20
 Identities = 52/150 (34%), Positives = 80/150 (53%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 463
           L+L P REL  Q   V +  ++              ++ Q S+L   PDIV+ATPGR + 
Sbjct: 143 LILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVATPGRFL- 201

Query: 464 HIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 643
           H++      L SIE +V DEADR+ +  FA Q+ EI+      RQT+LFSAT+   + D 
Sbjct: 202 HLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLFSATLPRTLVDF 261

Query: 644 AAVSLKKPVKLFVNSNKEVAFNLRQEFVRI 733
           A   L+ PV + ++   +V+ +L+  F  +
Sbjct: 262 AKAGLQDPVLVRLDVESKVSADLQSAFFSV 291



 Score = 46.4 bits (105), Expect = 5e-06
 Identities = 22/63 (34%), Positives = 36/63 (57%)
 Frame = +1

Query: 55  ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
           ++F +M L++ L++AI    F  PTPIQ  TIP+ L G+DV             +++P++
Sbjct: 69  SNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMI 128

Query: 235 ERL 243
           E L
Sbjct: 129 EHL 131


>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
           Sum3|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 636

 Score = 86.6 bits (205), Expect = 4e-18
 Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
 Frame = +2

Query: 275 PGXLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGR 454
           P  L+L PTREL  Q+H  +R+                D++ Q   + Q  D++ ATPGR
Sbjct: 256 PTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGR 315

Query: 455 LIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS----PKRQTMLFSATM 622
           L+D I +     L +I+ LVLDEADRMLD  F  Q++ I+         +RQT++FSAT 
Sbjct: 316 LVDLI-DRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATF 374

Query: 623 SEEVKDLAAVSLKKPVKLFVNSNKEVAFNLRQEFVRI 733
             +++ LA   LK  V L V      + N+ Q+ V +
Sbjct: 375 PRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHV 411



 Score = 31.5 bits (68), Expect = 0.16
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +1

Query: 61  FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
           F +  L+  L++ I    +  PTP+Q  +IPI   G+D+             ++ PIL
Sbjct: 171 FTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPIL 228


>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 578

 Score = 84.2 bits (199), Expect = 2e-17
 Identities = 58/158 (36%), Positives = 79/158 (50%), Gaps = 5/158 (3%)
 Frame = +2

Query: 275 PGXLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGR 454
           P  LV+ PTREL  Q +     L Q               K +++   +N  ++I TPGR
Sbjct: 237 PRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAP-KSEQARAAKNASVIIGTPGR 295

Query: 455 LIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC-----SPKRQTMLFSAT 619
           L+D I N  S     +  LVLDEADRMLD  F + ++ II        +  RQT+ FSAT
Sbjct: 296 LLDLI-NDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSRQTVFFSAT 354

Query: 620 MSEEVKDLAAVSLKKPVKLFVNSNKEVAFNLRQEFVRI 733
             E V+ LAA  LK PVK+ + S++  A     + V I
Sbjct: 355 WPESVRALAATFLKDPVKITIGSDELAASQNITQIVEI 392



 Score = 34.7 bits (76), Expect = 0.017
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +1

Query: 103 GSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILERL 243
           G  N+  PTPIQAAT P  L G+DV             + +P L+ L
Sbjct: 181 GLKNYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQYL 227


>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
           Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 550

 Score = 82.2 bits (194), Expect = 9e-17
 Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
 Frame = +2

Query: 275 PGXLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGR 454
           P  LVL PTREL  Q+     +  +                 Q   L +  +I IATPGR
Sbjct: 196 PIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGR 255

Query: 455 LIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEV 634
           L+D + +  +  L  +  LVLDEADRMLD  F  Q+++I+ Q  P RQT++FSAT  +EV
Sbjct: 256 LLDMLDSNKT-NLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEV 314

Query: 635 KDLAAVSLKKPVKLFVNS-NKEVAFNLRQ 718
           + LA   L   +++ V S +   + N++Q
Sbjct: 315 QRLARDYLNDYIQVTVGSLDLAASHNIKQ 343



 Score = 31.9 bits (69), Expect = 0.12
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 88  LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
           ++K +  L F  PTPIQ    P+A+ G+D+             Y LP +
Sbjct: 133 VLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAI 181


>SPAC1006.07 |||translation initiation factor
           eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 392

 Score = 79.4 bits (187), Expect = 6e-16
 Identities = 43/152 (28%), Positives = 77/152 (50%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 463
           L+L PTREL  Q+  V   L                V+   + L+    +V+ TPGR+ D
Sbjct: 91  LILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVHD 150

Query: 464 HIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 643
            I+   +    ++++ VLDEAD ML   F +Q+ +I +   P  Q +L SATM ++V ++
Sbjct: 151 MIQRR-ALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLLSATMPQDVLEV 209

Query: 644 AAVSLKKPVKLFVNSNKEVAFNLRQEFVRIPK 739
               ++ P+++ V  ++     ++Q +V + K
Sbjct: 210 TTKFMRDPIRILVKKDELTLEGIKQFYVAVEK 241



 Score = 27.5 bits (58), Expect = 2.6
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +1

Query: 43  YDENA-SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXY 219
           YDE   +F +MNL   L++ I +  F  P+ IQ   I   L  +DV             +
Sbjct: 14  YDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATF 73

Query: 220 MLPILERL 243
            + +L+++
Sbjct: 74  SISVLQKI 81


>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
           related|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 394

 Score = 77.4 bits (182), Expect = 2e-15
 Identities = 45/152 (29%), Positives = 74/152 (48%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 463
           L+L PTREL  Q+  V   L                V      L     +V  TPGR+ D
Sbjct: 93  LILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTD 152

Query: 464 HIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 643
            IR   +    ++++L+LDEAD +L++ F EQ+ +I R   P  Q ++ SAT+ ++V ++
Sbjct: 153 MIRRR-NLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEM 211

Query: 644 AAVSLKKPVKLFVNSNKEVAFNLRQEFVRIPK 739
                  PV++ V  ++     L+Q F+ + K
Sbjct: 212 TNKFTTNPVRILVKRDELTLEGLKQYFIAVEK 243



 Score = 27.5 bits (58), Expect = 2.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 55  ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDV 177
           +SF  MNL   L++ I +  +  P+ +Q+  I     G+DV
Sbjct: 21  SSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDV 61


>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 595

 Score = 75.8 bits (178), Expect = 8e-15
 Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVK--YQESVLRQNPDIVIATPGRL 457
           L+LVPTREL  QV+ V  +L  F            +     Q  +L   PDIVIATP R 
Sbjct: 92  LLLVPTRELAQQVYNVLEKLTAFCSKHIRFINVATNSSDTVQRPLLLDLPDIVIATPSRC 151

Query: 458 IDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVK 637
           + H+ +     L  ++ LV+DEAD ML   + E MK + R      Q+ L SAT+S+ + 
Sbjct: 152 VVHVASGV-LPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFLMSATLSKNIA 210

Query: 638 DLAAVSLKKPVKLFVNSNKEVAFNLRQEFVR 730
            L  +  + P  L V  +KE +  L Q  V+
Sbjct: 211 SLQKLVCRNPFILAV-KDKEASGKLTQYVVK 240



 Score = 48.4 bits (110), Expect = 1e-06
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +1

Query: 58  SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
           +F + NL   L +AI    F  PT +Q+ TIP+AL GKD+             Y++PILE
Sbjct: 15  TFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQARTGSGKTAAYLIPILE 74

Query: 238 RLL 246
            LL
Sbjct: 75  LLL 77


>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 453

 Score = 74.1 bits (174), Expect = 2e-14
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 463
           L+L PTREL  Q+      L               D+  Q   L + P +V+ATPGRL D
Sbjct: 79  LILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSIDLSKRPHVVVATPGRLAD 138

Query: 464 HIRNTPS---FGLHSIEVLVLDEADRMLDEYFAEQMKEI--IRQCSPKRQTMLFSATMSE 628
            IR+       GL  I+ LV+DEADR+L   FA+ + +   +   S  RQT+LF+AT+++
Sbjct: 139 LIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASEDRQTLLFTATVTD 198

Query: 629 EVKDL 643
            ++ L
Sbjct: 199 AIRQL 203



 Score = 27.1 bits (57), Expect = 3.4
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +1

Query: 58  SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
           SF ++ +S  L+  + +L    PT IQ   I   L G++              + LPI+E
Sbjct: 8   SFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPIIE 67

Query: 238 R 240
           +
Sbjct: 68  K 68


>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 606

 Score = 73.3 bits (172), Expect = 4e-14
 Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
 Frame = +2

Query: 248 TRRKEGTGSPGXLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKY--------- 400
           TRR       G L++ PTREL  Q+  VT++L  +               Y         
Sbjct: 64  TRRDTDETGLGALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGKGTLTN 123

Query: 401 -QESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIR 577
              S   +NP +VI TPGRL + + +  S     +E+L+LDEAD ++D  F   ++ II 
Sbjct: 124 DLASFREKNPSVVIGTPGRLNEMLSHISS---KHLEILILDEADTLIDMGFQRTLQSIIS 180

Query: 578 QCSPKRQTMLFSATMSEEVKD-LAAVSLKKPVKLFV 682
           Q   +R+T LFSATM++ V   L    L+  V++ V
Sbjct: 181 QLPKQRRTGLFSATMNDTVSSFLKIAGLRNSVRVSV 216



 Score = 38.3 bits (85), Expect = 0.001
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +1

Query: 58  SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 237
           SF ++N+ + L  A+ +  F   TP+QA  IP+ L  KD+             Y+LP  +
Sbjct: 2   SFQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLPCFD 61

Query: 238 RL 243
           ++
Sbjct: 62  KV 63


>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
           Uap56|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 434

 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 43/161 (26%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
 Frame = +2

Query: 269 GSPGXLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXX-DVKYQESVLR---QNPDIV 436
           G    LVL  TREL  Q+     + +++             ++K      +   ++P IV
Sbjct: 118 GEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSKSPHIV 177

Query: 437 IATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEY-FAEQMKEIIRQCSPKRQTMLFS 613
           +ATPGRL   +R      ++S++  VLDE D++L+       ++E+ R   P++Q M+FS
Sbjct: 178 VATPGRLNALVREK-ILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFS 236

Query: 614 ATMSEEVKDLAAVSLKKPVKLFVNSNKEVAFN-LRQEFVRI 733
           AT+S E++ +    ++ P++++V+   ++  + L+Q +V++
Sbjct: 237 ATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKL 277



 Score = 33.5 bits (73), Expect = 0.040
 Identities = 17/64 (26%), Positives = 30/64 (46%)
 Frame = +1

Query: 52  NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 231
           +  F +  L   L++AI    F HP+ +Q   IP ++LG DV             ++L  
Sbjct: 50  STGFRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLST 109

Query: 232 LERL 243
           L+++
Sbjct: 110 LQQI 113


>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 481

 Score = 68.5 bits (160), Expect = 1e-12
 Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESV--LRQNPDIVIATPGRL 457
           +++ PTREL  Q++    +L+ F            + K QE    LR+  D+ I TP RL
Sbjct: 119 IIVAPTRELCEQIYRQAEKLS-FGTSLKIIELSKSNEKIQEKAPKLREKYDMCIGTPMRL 177

Query: 458 IDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC-SPKRQTMLFSATMSEEV 634
           +  I+   SF    +E  V+DEADR+ +  F EQ   I+  C S      LFSAT+   V
Sbjct: 178 VQAIQTGLSF--EKVEFFVMDEADRLFEPGFIEQTDHILSACTSSNICKSLFSATIPSRV 235

Query: 635 KDLAAVSLKKPVKLFV 682
           ++LA V    P+++ V
Sbjct: 236 EELAKVVTVDPIRIIV 251


>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 535

 Score = 67.7 bits (158), Expect = 2e-12
 Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQ-NPDIVIATPGRLI 460
           ++L PTREL  Q+    R+L                   +E+ +R+ N +++IATPGRL 
Sbjct: 116 VILSPTRELALQIFEEARKLTYGTGIRVSYAIGGNSKMREENAIRRGNANLLIATPGRLE 175

Query: 461 DHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ-CSPKRQTMLFSATMSEEVK 637
           DH++N       S +  +LDEADR++D  FAE +  I     + K + + FSATM  +V 
Sbjct: 176 DHLQNPRILESLSTDSFILDEADRLMDMGFAESILNIHEAVTTTKTRKLCFSATMPPKVS 235

Query: 638 DL 643
           ++
Sbjct: 236 NV 237


>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 709

 Score = 65.7 bits (153), Expect = 8e-12
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQ---FXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGR 454
           +++ PTREL  Q++ V  +L                    K +++ +R+  +I+I TPGR
Sbjct: 220 VIMAPTRELCQQIYNVANKLNNNPLSHWIVSCNVIGGEKKKSEKARIRKGVNILIGTPGR 279

Query: 455 LIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII----RQCS--------PKRQ 598
           L DH+ NT +  +  +  +VLDE DR++D  F E + +I+     Q S        P R+
Sbjct: 280 LADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQSSIIKKDLSIPSRK 339

Query: 599 -TMLFSATMSEEVKDLAAVSLKKPVKL 676
            TML SATM + VK L+  +LK  + L
Sbjct: 340 VTMLCSATMKDTVKRLSDSALKDALYL 366


>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 604

 Score = 64.5 bits (150), Expect = 2e-11
 Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNP-----DIVIATP 448
           +V+VPTREL  QV                       ++++   L  +      D++++TP
Sbjct: 209 VVIVPTRELTVQVAKTFEYYMSGAGLQVCAWTGQKSLRHETYQLNGDENECRIDVLVSTP 268

Query: 449 GRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCS-PK 592
           GRL+DHIRN  SF L  +  +V+DEADR+LD+ F + +  ++ + S PK
Sbjct: 269 GRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEISHPK 317



 Score = 27.1 bits (57), Expect = 3.4
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +1

Query: 31  EPPPYDENAS--FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIAL 162
           EP   D N +  F ++N+S  L++ +   N      +QAA +P+ L
Sbjct: 116 EPITVDPNTTVEFSSLNISSKLVERLQKQNITRGFAVQAAVLPLLL 161


>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 648

 Score = 63.7 bits (148), Expect = 3e-11
 Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 463
           LV+ PTREL  Q+      +                V+ Q+ +L ++P +V+ATPGRL  
Sbjct: 196 LVVAPTRELAHQICQHFELIKPSPNIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWS 255

Query: 464 HI-RNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII----RQCSPKRQTMLFSATMSE 628
            I  N  +     I+ LVLDEADR+L +   E++ +++         +RQT +FSAT  E
Sbjct: 256 VINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEILGNPMHTQRQTFIFSATFDE 315

Query: 629 EVKDLAAVSLKKPVKLFVNSNKE 697
            ++     ++K  +    NS  E
Sbjct: 316 GLQQRLKKNMKGNITEKYNSPME 338



 Score = 33.5 bits (73), Expect = 0.040
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +1

Query: 55  ASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
           +++ + +LS  ++ ++    F  P PIQ+  IP A +G D+             + +PIL
Sbjct: 122 SAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPIL 181

Query: 235 ERLL 246
           E  L
Sbjct: 182 EHCL 185


>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score = 63.7 bits (148), Expect = 3e-11
 Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
 Frame = +2

Query: 275 PGXLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGR 454
           P  +VL PTREL  Q+     + A+               + Q   + Q   IV+ATPGR
Sbjct: 326 PYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGR 385

Query: 455 LIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII-------------------R 577
           L+D +     F L     +V+DEADRMLD  F + + +I+                    
Sbjct: 386 LLDCLERR-LFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATAN 444

Query: 578 QCSPKRQTMLFSATMSEEVKDLAAVSLKKPVKLFVNS 688
             S +RQT++FSAT+   V +LA   L +PV L + +
Sbjct: 445 SSSSRRQTIMFSATLPPRVANLAKSYLIEPVMLTIGN 481



 Score = 30.7 bits (66), Expect = 0.28
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = +1

Query: 76  LSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 234
           L   ++K +  +N+  P+ IQ A IP+ L  KD+             +++P++
Sbjct: 256 LPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLI 308


>SPBC776.09 |ste13||ATP-dependent RNA helicase
           Ste13|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 485

 Score = 57.2 bits (132), Expect = 3e-09
 Identities = 37/131 (28%), Positives = 58/131 (44%)
 Frame = +2

Query: 284 LVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 463
           L+LVPTREL  Q   V + L +              ++     L     IV+ TPGR++D
Sbjct: 116 LILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLD 175

Query: 464 HIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDL 643
            +              V+DEAD++L   F   +++++      RQ  L+SAT    VK+ 
Sbjct: 176 -LAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSATFPLIVKNF 234

Query: 644 AAVSLKKPVKL 676
               L KP ++
Sbjct: 235 MDKHLNKPYEI 245



 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +1

Query: 61  FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 240
           F +  L R L+  I    F  P+PIQ  +IPIAL G+D+             +++P LE+
Sbjct: 46  FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEK 105

Query: 241 L 243
           +
Sbjct: 106 V 106


>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 503

 Score = 53.2 bits (122), Expect = 5e-08
 Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
 Frame = +2

Query: 275 PGXLVLVPTRELGAQVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGR 454
           P  + L P+REL  Q+  V  ++ ++              K  +     +  IVI TPG 
Sbjct: 185 PQAICLAPSRELARQIMDVVTEMGKYTEVKTAFGIKDSVPKGAKI----DAQIVIGTPGT 240

Query: 455 LIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKR-QTMLFSATMSEE 631
           ++D ++         I+V VLDEAD MLD+         I+   P+  Q +LFSAT SE 
Sbjct: 241 VMDLMKRR-QLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSATFSER 299

Query: 632 VKDLA 646
           V+  A
Sbjct: 300 VEKYA 304


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 501  SRFWCWTKLTGCWMNT 548
            SRF+C+TK+ G WM T
Sbjct: 2368 SRFYCYTKMLGEWMFT 2383


>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
            |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1233

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = +2

Query: 485  FGLHSIE---VLVLDEADRMLDEYFAEQMKEIIRQ-CSPKRQTMLFSATMSEEVKDLAAV 652
            F +HS +     VLDE D  LD+    ++   IRQ  S   Q ++ S       K  A V
Sbjct: 1146 FAIHSYQPSPFFVLDEIDAALDQTNVTKIANYIRQHASSGFQFVVISLKNQLFSKSEALV 1205

Query: 653  SLKKPVKLFVNSNKEVAFNLRQEFVRIPK 739
             + +  +   NS++ ++ N+R  F  I K
Sbjct: 1206 GIYRDQQ--ENSSRTLSINVRDYFFLILK 1232


>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 821

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 85  PLMKAIGSLNFVHPTP 132
           PL +AIGS +F+HP P
Sbjct: 127 PLRRAIGSYDFLHPRP 142


>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 491

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 15/68 (22%), Positives = 21/68 (30%)
 Frame = +3

Query: 87  SHEGYWLSELCTPNAHTSRNHSYCTFXXXXXXXXXXXXXXDGCIHAAHTGASPVQGERRG 266
           ++ GYW  +L   N H                            H AH G SP+   +  
Sbjct: 94  AYHGYWAEDLTQLNPHFGTKQDLTELVDQLHKRNMLCMIDIVVNHMAHAGDSPIDYSKYA 153

Query: 267 PDHQGSWY 290
           P +  S Y
Sbjct: 154 PFNSPSHY 161


>SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 716

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -3

Query: 634 DFLAHGGREQHGL--TFRGTLTDD 569
           DF+ +GGREQH +    R  LT+D
Sbjct: 82  DFIVYGGREQHLMFPLLRAGLTND 105


>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1316

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 22/75 (29%), Positives = 32/75 (42%)
 Frame = +2

Query: 482 SFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSEEVKDLAAVSLK 661
           S G+ + E L  D  D   +   +E   + +++     Q  + SAT  EEVK    VS K
Sbjct: 463 SLGVFNYE-LKEDNDDLCTENDSSEGDSDSLKKVDFLGQIAMMSATDREEVKSSIVVSTK 521

Query: 662 KPVKLFVNSNKEVAF 706
           K   L      E+ F
Sbjct: 522 KSTILEFAKEIEIIF 536


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,498,255
Number of Sequences: 5004
Number of extensions: 72200
Number of successful extensions: 265
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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