Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_D20
(862 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 63 3e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 62 6e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 8e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 59 4e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 58 8e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 8e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 58 1e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 57 2e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 55 7e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 53 4e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 9e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 8e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 2e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 37 3e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 5e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.13
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 8.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 8.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.4
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.3 bits (147), Expect = 3e-12
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 417
L++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFVI 552
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 167 CLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.3 bits (147), Expect = 3e-12
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 417
L++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFVI 552
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 167 CLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 417
L++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFVI 552
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 99 CLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 62.1 bits (144), Expect = 6e-12
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 417
L++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFVI 552
++ + M + +P D Q C KFGS + +++D V+
Sbjct: 99 CLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 61.7 bits (143), Expect = 8e-12
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 417
L++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFVI 552
++ + M + +P D Q C KFGS + +++D V+
Sbjct: 99 CLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.7 bits (143), Expect = 8e-12
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 417
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMD 543
V W + + ++ +P D QTC KFGS + ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 60.9 bits (141), Expect = 1e-11
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 417
L++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFVI 552
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 99 CLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 60.9 bits (141), Expect = 1e-11
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 417
++ +W D +L W E+G L V S+ +WRPD+VL N A A +A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMD 543
V W + + ++ +P D QTC KFGS + ++D
Sbjct: 141 VEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 417
L++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFVI 552
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 99 CLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 417
L++ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFVI 552
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 99 CLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 59.3 bits (137), Expect = 4e-11
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 408
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 409 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMD 543
G VSW + + ++ +P D Q+C KFGS + ++D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 58.4 bits (135), Expect = 8e-11
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR----VSN 408
L+ W D +L W+ ++G + +++W+PD+VL N A G+Y +R + +
Sbjct: 79 LRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNAD---GNYEVRYKSNVLIYP 135
Query: 409 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFVI 552
NG V W+ + ++ + +P D QTC KFGS D++ +
Sbjct: 136 NGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLAL 183
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.4 bits (135), Expect = 8e-11
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 408
++ +W D +L W E+G L V S+ +WRPD+VL N A G+Y + +A V
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYY 137
Query: 409 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMD 543
+G V W + S+ ++ +P D+QTC K GS + ++D
Sbjct: 138 SGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 58.4 bits (135), Expect = 8e-11
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGS 417
L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A + G
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGK 132
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMD 543
V W + + + +P D QTC KFGS + ++D
Sbjct: 133 VLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 58.0 bits (134), Expect = 1e-10
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 411
+ + W D LSW ++ G + V S+ +W PD+ + N+ T G V ++
Sbjct: 95 MTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSS 154
Query: 412 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFVIDXRIYXM 573
GSVS + + + +WP D C FGS +H +E++ +D + + M
Sbjct: 155 GSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 417
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMD 543
++ + + + +P D Q C KFGS + ++D
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.2 bits (127), Expect = 7e-10
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 408
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 409 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMD 543
G V W + + ++ +P D QTC KFGS + +D
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 52.8 bits (121), Expect = 4e-09
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = +1
Query: 256 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSW 426
W D L WNA E+ G V R+WRPD +L N A + V S+ G V W
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
Query: 427 IKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMD 543
+ + + ++ +P D Q C K+ S + +++
Sbjct: 122 LSHGIFRSSCDIDVEFFPFDEQRCVLKWASWTYDGYQLE 160
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 51.6 bits (118), Expect = 9e-09
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +1
Query: 247 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGS 417
+ +W+D+RL++ G+ + + R+W+PD N + T R+ +G
Sbjct: 58 RQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGR 117
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 516
V + RL I M L+N+P D Q C +FGS
Sbjct: 118 VLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.4 bits (110), Expect = 8e-08
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +1
Query: 247 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGS 417
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 418 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 516
+ + RL I M+L N+P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +1
Query: 256 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 420
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 421 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFV 549
+ R+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +1
Query: 256 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 420
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 421 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFV 549
+ R+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.7 bits (91), Expect = 2e-05
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNG 414
L W D+RL+++ E + +E++W PD N + D R R+S +G
Sbjct: 88 LNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDG 147
Query: 415 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 516
SV++ R + M L +P D Q CT + S
Sbjct: 148 SVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 40.3 bits (90), Expect = 2e-05
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Frame = +1
Query: 244 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDY---ALRARVSNN 411
L++ W L+W + E+ ++ V S +W PD+V+ ++ + D ++ V N+
Sbjct: 86 LKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNS 144
Query: 412 GSVSWIKRLDISTPISMQLDN--WPNDMQTCTFKFGSXMHXSDEM 540
G++ + TP+ + D+ WP D+ CT S H S+E+
Sbjct: 145 GTILCVP-FTTYTPVC-EYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 256 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 408
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 409 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 516
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 256 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 408
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 409 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 516
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 256 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 408
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 409 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 516
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.7 bits (81), Expect = 3e-04
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +1
Query: 328 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 498
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 499 TFKFGSXMHXSDEMDFV 549
+ S H + ++ F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 322 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 492
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 493 TCTFKFGSXMHXSDEMDFVID 555
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 31.1 bits (67), Expect = 0.014
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Frame = +1
Query: 244 LQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNG 414
LQ W D RL + N ++ + + +W PD ++ R+ NG
Sbjct: 113 LQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNG 172
Query: 415 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFV 549
+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 173 TVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 31.1 bits (67), Expect = 0.014
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Frame = +1
Query: 244 LQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNG 414
LQ W D RL + N ++ + + +W PD ++ R+ NG
Sbjct: 113 LQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNG 172
Query: 415 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFV 549
+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 173 TVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.1 bits (67), Expect = 0.014
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Frame = +1
Query: 244 LQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNG 414
LQ W D RL + N ++ + + +W PD ++ R+ NG
Sbjct: 164 LQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNG 223
Query: 415 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFV 549
+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 224 TVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 31.1 bits (67), Expect = 0.014
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Frame = +1
Query: 244 LQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNG 414
LQ W D RL + N ++ + + +W PD ++ R+ NG
Sbjct: 113 LQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNG 172
Query: 415 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHXSDEMDFV 549
+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 173 TVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +1
Query: 322 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 486
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 487 MQTCTFKFGSXMHXSDEM 540
+Q C S + ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 307 KCCSPIPLRSNSVVCRSNSFEDLPVSAAVDSDSR 206
K C + SNS+ RS SF+ + DSR
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 307 KCCSPIPLRSNSVVCRSNSFEDLPVSAAVDSDSR 206
K C + SNS+ RS SF+ + DSR
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 307 KCCSPIPLRSNSVVCRSNSFEDLPVSAAVDSDSR 206
K C + SNS+ RS SF+ + DSR
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 307 KCCSPIPLRSNSVVCRSNSFEDLPVSAAVDSDSR 206
K C + SNS+ RS SF+ + DSR
Sbjct: 205 KTCKKYAISSNSLGSRSRSFQRTSSCHSRYEDSR 238
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 307 KCCSPIPLRSNSVVCRSNSFEDLPVSAAVDSDSR 206
K C + SNS+ RS SF+ + DSR
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 307 KCCSPIPLRSNSVVCRSNSFEDLPVSAAVDSDSR 206
K C + SNS+ RS SF+ + DSR
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 307 KCCSPIPLRSNSVVCRSNSFEDLPVSAAVDSDSR 206
K C + SNS+ RS SF+ + DSR
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 309 PSAAAPFPCVPTQS 268
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,979
Number of Sequences: 438
Number of extensions: 4430
Number of successful extensions: 88
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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