Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_D15
(885 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 66 5e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 65 9e-13
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 65 9e-13
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 64 2e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 63 3e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 62 9e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 62 9e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 5e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 59 5e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 59 6e-11
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 52 7e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 9e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 50 3e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 47 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 1e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 43 3e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 42 1e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 33 0.003
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 32 0.006
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 29 0.043
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.17
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 65.7 bits (153), Expect = 5e-13
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Frame = +2
Query: 194 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 370
N+ E ++ L+ W D +L W+ ++G + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNAD---G 121
Query: 371 DYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDF 538
+Y +R + + NG V W+ + ++ + +P D QTC KFGS N D++
Sbjct: 122 NYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSL 181
Query: 539 VI--DKRIYRM---FXSGXWDV 589
+ +K + + SG WD+
Sbjct: 182 ALYNNKNFVDLSDYWKSGTWDI 203
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 64.9 bits (151), Expect = 9e-13
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Frame = +2
Query: 77 CENATSLPLMIDSLLATYDRESPPDSKIVVSLTLHLR-------HANIRESESTVRILAD 235
C + D LL+ Y++ P + +LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 236 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 409
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 410 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 535
V W + + ++ +P D QTC KFGS + ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 64.9 bits (151), Expect = 9e-13
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Frame = +2
Query: 77 CENATSLPLMIDSLLATYDRESPPDSK----IVVSLTLHLRHA---NIRESESTVRILAD 235
C + D LL+ Y+R P S +VV L L L N+++ T +
Sbjct: 15 CHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW-- 72
Query: 236 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGS 409
L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A + G
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGK 132
Query: 410 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 535
V W + + + +P D QTC KFGS + ++D
Sbjct: 133 VLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 64.1 bits (149), Expect = 2e-12
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Frame = +2
Query: 104 MIDSLLATYDRESPPDSKIVVSLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 268
+ D LL+ Y+R P +LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 269 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 433
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 434 ISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 535
+ + ++ +P D Q+C KFGS N ++D
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.3 bits (147), Expect = 3e-12
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Frame = +2
Query: 104 MIDSLLATYDRESPP----DSKIVVSLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 268
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 269 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDIST 442
WN E+G L ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 443 PISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 544
+ + +P D Q C KFGS + +++D V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.3 bits (147), Expect = 3e-12
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Frame = +2
Query: 104 MIDSLLATYDRESPP----DSKIVVSLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 268
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 269 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDIST 442
WN E+G L ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 443 PISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 544
+ + +P D Q C KFGS + +++D V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 194 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 367
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 368 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 544
G Y V++NGS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 61.7 bits (143), Expect = 9e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 194 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 367
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 368 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 544
G Y V+++GS ++ + M + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 61.7 bits (143), Expect = 9e-12
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Frame = +2
Query: 83 NATSLPLMIDSLLATYDRESPPD---SKIVVSLTLHLRHAN-IRESESTVRILADLQMNW 250
N +++ ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 251 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 421
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 422 KRLDISTPISMQLDNWPNDMQTCTFKFGS 508
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.7 bits (143), Expect = 9e-12
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Frame = +2
Query: 104 MIDSLLATYDRESPP--DSKIVVSLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 268
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 269 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 442
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 443 PISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 535
+ ++ +P D QTC KFGS + ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 194 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 367
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 368 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 544
G Y V+++GS ++ + M + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 194 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 367
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 368 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 544
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 194 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 367
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 368 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 544
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 194 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 367
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 368 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVI 544
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.3 bits (137), Expect = 5e-11
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Frame = +2
Query: 104 MIDSLLATYDRESPP--DSKIVVSLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 268
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 269 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 433
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 434 ISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 535
+ S+ ++ +P D+QTC K GS + ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 59.3 bits (137), Expect = 5e-11
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Frame = +2
Query: 104 MIDSLLATYD-RESPPDSK---IVVSLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 268
+++ LL TY+ E P ++ +V+S L L ++ E + L++ W D +
Sbjct: 27 LLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLLITNLWLKLEWNDVNMR 86
Query: 269 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDIST 442
WN ++G L + RLW+PDV++ N+A G Y V NNG+ ++ +
Sbjct: 87 WNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKS 146
Query: 443 PISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVIDKR----IYRMFXSGXWDV 589
+ + +P D Q C KFGS + ++D + I +G WD+
Sbjct: 147 TCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 58.8 bits (136), Expect = 6e-11
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
Frame = +2
Query: 80 ENATSLPLMIDSLLATYDRESPPDS--KIVVSLTLHL--RHANIRESESTVRILADLQMN 247
++ T+L + L YD P S +I ++T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 248 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 415
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 416 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFVIDKRIYRM 565
+ + + +WP D C FGS + + +E++ +DK+ + M
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = -2
Query: 623 GFGXATGTRSXQHPTXLXRTYGIFFCQ 543
GF ++ HPT L + FC+
Sbjct: 28 GFSYLLNCKNYDHPTTLLKLKRYLFCE 54
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 58.8 bits (136), Expect = 6e-11
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Frame = +2
Query: 104 MIDSLLATYDRESPP----DSKIVVSLTLHLRH---ANIRESESTVRILADLQMNWIDKR 262
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 81
Query: 263 LSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 427
L WN ++G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPP 138
Query: 428 LDISTPISMQLDNWPNDMQTCTFKFGS 508
+ + ++ +P D QTC KFGS
Sbjct: 139 AIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +2
Query: 158 IVVSLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 334
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 335 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 508
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 52.0 bits (119), Expect = 7e-09
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Frame = +2
Query: 116 LLATYDRESPPDSKIVVSLT--LHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW- 286
L YDR+ P+ K + L ++H N+ E TV L++ W L+W + E+
Sbjct: 44 LFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFD 103
Query: 287 GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQL 460
++ V S +W PD+V+ + + ++ V N+G++ + TP+ +
Sbjct: 104 SINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEY 161
Query: 461 DN--WPNDMQTCTFKFGSRMXNSDEM 532
D+ WP D+ CT S S+E+
Sbjct: 162 DHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 51.6 bits (118), Expect = 9e-09
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +2
Query: 92 SLPLMIDSLLATYDRESPPD----SKIVVSLTLHLRHAN-IRESESTVRILADLQMNWID 256
++ +++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 257 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 427
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 428 LDISTPISMQLDNWPNDMQTCTFKFGS 508
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 50.0 bits (114), Expect = 3e-08
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Frame = +2
Query: 104 MIDSLLATYDR------ESPPDSKIVVSLTLHLRH-ANIRESESTVRILADLQMNWIDKR 262
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 263 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 427
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 428 LDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFV 541
+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.2 bits (107), Expect = 2e-07
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Frame = +2
Query: 104 MIDSLLATYDR------ESPPDSKIVVSLTLHLRH-ANIRESESTVRILADLQMNWIDKR 262
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 263 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 427
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 428 LDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFV 541
+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.4 bits (100), Expect = 1e-06
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +2
Query: 83 NATSLPLMIDSLLATYDRESPPD---SKIVVSLTLH-LRHANIRESESTVRILADLQMNW 250
N ++ ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 251 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 403
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 404 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 508
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.2 bits (97), Expect = 3e-06
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +2
Query: 83 NATSLPLMIDSLLATYDRESPPD---SKIVVSLTLH-LRHANIRESESTVRILADLQMNW 250
N ++ ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 251 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 403
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 404 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 508
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.5 bits (93), Expect = 1e-05
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 7/141 (4%)
Frame = +2
Query: 107 IDSLLATYDRESPPD---SKIVVSLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 274
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 275 AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTP 445
E + +E++W PD N + D R R+S +GSV++ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 446 ISMQLDNWPNDMQTCTFKFGS 508
M L +P D Q CT + S
Sbjct: 161 CMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 248 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 400
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 401 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 508
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 33.5 bits (73), Expect = 0.003
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Frame = +2
Query: 206 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 373
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 374 YALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMXNSDEMDFV 541
++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S + ++ F+
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.1 bits (72), Expect = 0.003
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 80 ENATSLPLMIDSLLAT--YDRE--SPPDSKIVVSLT-LHLRHANIRESESTVRILADLQM 244
E+ S ++D+LL + YD+ P + V+++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 245 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 415
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 416 WIKRLDISTPISMQLDNWPNDMQTCTFKFGS 508
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.1 bits (72), Expect = 0.003
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 80 ENATSLPLMIDSLLAT--YDRE--SPPDSKIVVSLT-LHLRHANIRESESTVRILADLQM 244
E+ S ++D+LL + YD+ P + V+++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 245 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 415
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 416 WIKRLDISTPISMQLDNWPNDMQTCTFKFGS 508
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.1 bits (72), Expect = 0.003
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 80 ENATSLPLMIDSLLAT--YDRE--SPPDSKIVVSLT-LHLRHANIRESESTVRILADLQM 244
E+ S ++D+LL + YD+ P + V+++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 245 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 415
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 416 WIKRLDISTPISMQLDNWPNDMQTCTFKFGS 508
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 32.3 bits (70), Expect = 0.006
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 314 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 484
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 485 TCTFKFGSRMXNSDEMDFVID 547
C + S +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 29.5 bits (63), Expect = 0.043
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = +2
Query: 236 LQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNG 406
LQ W D RL + N ++ + + +W PD ++ R+ NG
Sbjct: 164 LQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNG 223
Query: 407 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 508
+V+++ R + +L+ +P D C+F S
Sbjct: 224 TVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.17
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +2
Query: 314 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 478
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 479 MQTC 490
+Q C
Sbjct: 127 IQIC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 301 PSAAAPFPCVPTQS 260
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,507
Number of Sequences: 438
Number of extensions: 6588
Number of successful extensions: 87
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -