Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_D13
(889 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 4.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 4.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 4.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 4.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 4.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 4.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 4.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 4.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 4.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 4.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 8.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 8.6
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 8.6
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 129 PPRFIPPDMYRLRPPPNPR 147
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 377 PPRFIPPDMYRLRPPPNPR 395
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 362 PPRFIPPDMYRLRPPPNPR 380
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 682 PPPXXPPXXFXXNSPPPPR 738
PP PP + PP PR
Sbjct: 378 PPRFIPPDMYRLRPPPNPR 396
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 357 QSSPLFKNRNVAVDTLXGV 413
+SSPL RN+ TL GV
Sbjct: 1215 KSSPLVYKRNINTYTLDGV 1233
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 311 FCSTRLTSEGSANVTKPKPLER 246
+C R ++ GS+N P+P+ +
Sbjct: 46 YCGRRPSTFGSSNEALPQPISK 67
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 311 FCSTRLTSEGSANVTKPKPLER 246
+C R ++ GS+N P+P+ +
Sbjct: 46 YCGRRPSTFGSSNEALPQPISK 67
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,576
Number of Sequences: 438
Number of extensions: 4771
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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