Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_D09
(866 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 34 0.001
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 33 0.003
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 33 0.003
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 31 0.010
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 27 0.22
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 8.4
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 34.3 bits (75), Expect = 0.001
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 696 TSATGVVLPCRVKGRPKPKITWFNGQNVPIEXNPRMK-VLRSGELV 830
++ TG V+ C+ +G P+P I W + P ++ VL +G LV
Sbjct: 16 SNGTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLV 61
Score = 30.3 bits (65), Expect = 0.024
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 711 VVLPCRVKGRPKPKITWFNGQNVPIEXNPRMKVLRSGELVISSL 842
V LPC G P P++TW + ++ + R++ L G L I +
Sbjct: 1294 VKLPCLAVGVPAPEVTW-KVRGAVLQSSDRLRQLPEGSLFIKEV 1336
Score = 28.3 bits (60), Expect = 0.097
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +3
Query: 360 PGTTIELTCEAAGSPAPSVHW---FKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTR 530
PG ++ L C A+G+P P + W K S V ++ S ISS T
Sbjct: 407 PGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISS----TH 462
Query: 531 TTSQDVYTCL 560
T +Y C+
Sbjct: 463 TNDGGLYKCI 472
Score = 26.6 bits (56), Expect = 0.30
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 363 GTTIELTCEAAGSPAPSVHWFKND 434
GT + C+A G+P P + W + D
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRAD 41
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 363 GTTIELTCEAAGSPAPSVHWFKNDSPV 443
G TC G+P +V W K+ P+
Sbjct: 322 GRPATFTCNVRGNPIKTVSWLKDGKPL 348
Score = 25.0 bits (52), Expect = 0.90
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 351 AHTPGTTIELTCEAAGSPAPSVHWFK--NDSP 440
A G+ + C+A G P P V W K D+P
Sbjct: 689 AFAQGSDARVECKADGFPKPQVTWKKAAGDTP 720
Score = 25.0 bits (52), Expect = 0.90
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 723 CRVKGRPKPKITW 761
C+ G PKP++TW
Sbjct: 700 CKADGFPKPQVTW 712
Score = 25.0 bits (52), Expect = 0.90
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 372 IELTCEAAGSPAPSVHW 422
++L C A G PAP V W
Sbjct: 1294 VKLPCLAVGVPAPEVTW 1310
Score = 24.6 bits (51), Expect = 1.2
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +3
Query: 372 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQD- 545
+ L C A G P P W+K + V+ NE + ++S TLI+ +D
Sbjct: 230 LPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNE-------RVRQVSGTLIIREARVEDS 282
Query: 546 -VYTCL 560
Y C+
Sbjct: 283 GKYLCI 288
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 717 LPCRVKGRPKPKITW 761
L C G P P+ITW
Sbjct: 413 LKCVASGNPTPEITW 427
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 33.5 bits (73), Expect = 0.003
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 2/163 (1%)
Frame = +3
Query: 360 PGTTIELTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTS 539
PG + L C AAG+P P V W + + +I T + S + ++
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTWALDG---FALPTNGRFMIGQYVTVHGDVISHVNISHVMV 491
Query: 540 QD--VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFR*SLASWSPIAPTWTTSATGV 713
+D Y+C+ + A +++ A+L L I + +
Sbjct: 492 EDGGEYSCMA---------------ENRAGKVTHAARLNVYGLPYIRLIPKVTAVAGETL 536
Query: 714 VLPCRVKGRPKPKITWFNGQNVPIEXNPRMKVLRSGELVISSL 842
L C V G P +I W N + + R KVL G LVI+S+
Sbjct: 537 RLKCPVAGYPIEEIKW-ERANRELPDDLRQKVLPDGTLVITSV 578
Score = 30.7 bits (66), Expect = 0.018
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 696 TSATGVVLPCRVKGRPKPKITWFNGQNVPIEXNPRM-KVLRSGELVI 833
++++G L C G P I W P+ P + +VLR+G LV+
Sbjct: 43 SNSSGAWLDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVL 89
Score = 29.5 bits (63), Expect = 0.042
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 690 WTTSATGVVLPCRVKGRPKPKITWFNGQNVPIEXNP--RMKVLRSGELVISSLLWSD 854
W SAT L C G P + W+ GQ I + +++L SGEL++S+L D
Sbjct: 1327 WRGSAT---LACNAVGDPTRE--WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQD 1378
Score = 25.8 bits (54), Expect = 0.52
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 339 LPSYAHTPGTTIELTCEAAGSPAPSVHW 422
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 372 IELTCEAAGSPAPSVHWFK 428
+ L C+A G P P++ W K
Sbjct: 727 VALHCQAQGVPTPTIVWKK 745
Score = 23.4 bits (48), Expect = 2.8
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Frame = +3
Query: 711 VVLPCRVKGRPKPKITW------FNGQNVPIEXNPRMKVLRSGELVI 833
V L C+ +G P P I W +G+ + K+L +G L++
Sbjct: 727 VALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLL 773
Score = 22.6 bits (46), Expect = 4.8
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +3
Query: 297 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKND 434
S G H + + +GP S+ P + +E L C A GSP ++ W D
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTAD 68
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 33.5 bits (73), Expect = 0.003
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 2/163 (1%)
Frame = +3
Query: 360 PGTTIELTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTS 539
PG + L C AAG+P P V W + + +I T + S + ++
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTWALDG---FALPTNGRFMIGQYVTVHGDVISHVNISHVMV 491
Query: 540 QD--VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFR*SLASWSPIAPTWTTSATGV 713
+D Y+C+ + A +++ A+L L I + +
Sbjct: 492 EDGGEYSCMA---------------ENRAGKVTHAARLNVYGLPYIRLIPKVTAVAGETL 536
Query: 714 VLPCRVKGRPKPKITWFNGQNVPIEXNPRMKVLRSGELVISSL 842
L C V G P +I W N + + R KVL G LVI+S+
Sbjct: 537 RLKCPVAGYPIEEIKW-ERANRELPDDLRQKVLPDGTLVITSV 578
Score = 30.7 bits (66), Expect = 0.018
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 696 TSATGVVLPCRVKGRPKPKITWFNGQNVPIEXNPRM-KVLRSGELVI 833
++++G L C G P I W P+ P + +VLR+G LV+
Sbjct: 43 SNSSGAWLDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVL 89
Score = 29.5 bits (63), Expect = 0.042
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 690 WTTSATGVVLPCRVKGRPKPKITWFNGQNVPIEXNP--RMKVLRSGELVISSLLWSD 854
W SAT L C G P + W+ GQ I + +++L SGEL++S+L D
Sbjct: 1323 WRGSAT---LACNAVGDPTRE--WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQD 1374
Score = 25.8 bits (54), Expect = 0.52
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 339 LPSYAHTPGTTIELTCEAAGSPAPSVHW 422
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 24.2 bits (50), Expect = 1.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 372 IELTCEAAGSPAPSVHWFK 428
+ L C+A G P P++ W K
Sbjct: 723 VALHCQAQGVPTPTIVWKK 741
Score = 23.4 bits (48), Expect = 2.8
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Frame = +3
Query: 711 VVLPCRVKGRPKPKITW------FNGQNVPIEXNPRMKVLRSGELVI 833
V L C+ +G P P I W +G+ + K+L +G L++
Sbjct: 723 VALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLL 769
Score = 22.6 bits (46), Expect = 4.8
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +3
Query: 297 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKND 434
S G H + + +GP S+ P + +E L C A GSP ++ W D
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTAD 68
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 31.5 bits (68), Expect = 0.010
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 378 LTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIAR 503
+ C AG P P V W KND + + +LI + I +
Sbjct: 421 IRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIK 462
Score = 29.5 bits (63), Expect = 0.042
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 711 VVLPCRVKGRPKPKITW-FNGQNVPIEXNPRMKVLRSGELVISSL 842
V + C V G P P + W NG ++ P ++V G L ++ +
Sbjct: 328 VEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKV 372
Score = 24.2 bits (50), Expect = 1.6
Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 723 CRVKGRPKPKITWFNGQNVPIEXNP-RMKVLRSG-ELVISSLLWSD 854
C V G P P++ W P + ++ +G +L+I ++ ++D
Sbjct: 423 CHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIKNVDYAD 468
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 27.1 bits (57), Expect = 0.22
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 363 GTTIELTCEAAGSPAPSVHWFKNDSPVYEY 452
G I C A G P P + W K+ +Y +
Sbjct: 37 GRKITFFCMATGFPRPEITWLKDGIELYHH 66
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 723 CRVKGRPKPKITW 761
C G P+P+ITW
Sbjct: 44 CMATGFPRPEITW 56
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -3
Query: 600 PQCWLAQSWSSWWQ 559
P WL+ W S WQ
Sbjct: 161 PNNWLSVFWGSAWQ 174
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,346
Number of Sequences: 438
Number of extensions: 4675
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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