Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_D07
(824 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039716-4|AAB96739.1| 616|Caenorhabditis elegans Aminopeptidas... 163 1e-40
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ... 103 2e-22
Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical pr... 31 1.3
U20864-8|AAC46665.2| 330|Caenorhabditis elegans Peroxisome asse... 29 5.3
U29379-1|AAF99982.2| 319|Caenorhabditis elegans Hypothetical pr... 28 9.3
>AF039716-4|AAB96739.1| 616|Caenorhabditis elegans Aminopeptidase p
protein 1 protein.
Length = 616
Score = 163 bits (397), Expect = 1e-40
Identities = 89/225 (39%), Positives = 127/225 (56%), Gaps = 7/225 (3%)
Frame = +1
Query: 166 SLQRLQALRALMSSQRPV-------LAAYIIPTADAHNSEYIDAADARREWISAFTGSAG 324
+L++L LR+L S+R + + AY++P+ DAH+SEY+ D R +++S F+GS
Sbjct: 3 ALEKLAKLRSLFHSERVLALTSSKPMVAYLLPSTDAHHSEYLADYDFRVKFLSGFSGSNA 62
Query: 325 TAVVTSSQALVWTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGVD 504
VVT +AL+WTDGRY+TQ ++D ++W LMKQ PD+ T+ WL L+ G V+G D
Sbjct: 63 YVVVTDREALLWTDGRYFTQAGNQLDSNSWKLMKQGQPDSITVVDWLVRELERGSVIGFD 122
Query: 505 PQTMTRDEWTPIQTALKKISAQLVPISNNLVDDVRIELGDPAPKRSHNELAPLHVRYTGR 684
P T D + LK Q V I NLVD E P+ + + L V TG
Sbjct: 123 PTLSTFDAGSKTFKRLKAAGLQPVSIPGNLVD----EFWTDRPRLAGEPVVVLDVEDTGL 178
Query: 685 TAGEKIAELXRKMAXXKASALVLTXLXDIAYTLNLRGSDIEYNPV 819
T +K+ L K+ K A V T L D+ + LN+RGSDI YNP+
Sbjct: 179 TTSKKVENLREKLKQKKCDAAVFTLLDDVMWLLNIRGSDIPYNPL 223
>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
protein Y45G5AM.2 protein.
Length = 1061
Score = 103 bits (246), Expect = 2e-22
Identities = 71/223 (31%), Positives = 112/223 (50%), Gaps = 8/223 (3%)
Frame = +1
Query: 175 RLQALRALMSSQRPVLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQAL 354
R + R L + R +AAYI+P DAH +E I +R ++++ ++G +G A++T ++A+
Sbjct: 462 RFASERTLGYTDRTPIAAYILPNTDAHQNELIPDFFSRVQFLNGYSGPSGLAIITLNEAM 521
Query: 355 VWTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGVDPQTMTRDEWT 534
W D E +VD +WT+ + + WLA L VG DP T+ W
Sbjct: 522 FWVDNGLLKSAESQVDDRSWTV--KEYQSVEEVINWLAKILPPKSKVGFDP-TLVSYTWH 578
Query: 535 PIQTALKKISA---QLVPISNNLVDDV----RIELGDPAPKRSHN-ELAPLHVRYTGRTA 690
Q AL+ +++ +LV I N+VD++ + GD N P+HV
Sbjct: 579 --QQALQSMTSDRFELVAIPGNIVDEIWRMRPFQRGDVVKMLDKNTPEIPVHV------- 629
Query: 691 GEKIAELXRKMAXXKASALVLTXLXDIAYTLNLRGSDIEYNPV 819
KI L + + K A V+T L DI + LN+RG+D+ YNPV
Sbjct: 630 --KIDRLRKSLKPNKCLAAVITSLEDIMWLLNIRGNDLPYNPV 670
>Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.8 protein.
Length = 321
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -1
Query: 506 GSTPTTSPSLRFEASHFSKVGV--SGSVCFIKVHADKSTSLSNCV*Y------LPSVQTR 351
G+ T PS+ F+ S++ ++G SGS C I+ D + S C Y P + T
Sbjct: 96 GTWKWTDPSVTFDYSNW-QLGEPQSGSDCAIQDKGDGTWSAIGCTSYRPYVCVTPVIMTA 154
Query: 350 ACDDVTTAVP 321
C +TT +P
Sbjct: 155 TCPPITTPIP 164
>Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.6 protein.
Length = 321
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -1
Query: 506 GSTPTTSPSLRFEASHFSKVGV--SGSVCFIKVHADKSTSLSNCV*Y------LPSVQTR 351
G+ T PS+ F+ S++ ++G SGS C I+ D + S C Y P + T
Sbjct: 96 GTWKWTDPSVTFDYSNW-QLGEPQSGSDCAIQDKGDGTWSAIGCTSYRPYVCVTPVIMTA 154
Query: 350 ACDDVTTAVP 321
C +TT +P
Sbjct: 155 TCPPITTPIP 164
>U20864-8|AAC46665.2| 330|Caenorhabditis elegans Peroxisome
assembly factor protein13 protein.
Length = 330
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +1
Query: 259 SEYIDAADARREWISAFTGSAGTAVVTSSQALVWTDGRYYTQFEREVD-LSAWTLMKQTL 435
S+ + AA+ +R+W + G A ++QAL + E+E+ ++ TL
Sbjct: 218 SQMVQAAEEKRKW------ATGAAPHYTAQALF----DFQASNEQELSFMNGETLRVAPK 267
Query: 436 PDTPTLEKWLASNLKDGDVVGVDPQTMTR 522
+ P + WL +++ DG +G+ P R
Sbjct: 268 EEQPRVRGWLLASVADGSRIGLVPINYVR 296
>U29379-1|AAF99982.2| 319|Caenorhabditis elegans Hypothetical
protein K05B2.2a protein.
Length = 319
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 347 CDDVTTAVPADPVKADIHSRLASAASMYSEL 255
CD V +VP +P K H + S +SM + L
Sbjct: 87 CDLVDESVPLEPAKPYFHPKQTSTSSMVTSL 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,431,824
Number of Sequences: 27780
Number of extensions: 391998
Number of successful extensions: 1011
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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