Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_C12
(941 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 2e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 46 4e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 43 5e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 40 2e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 39 6e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 39 6e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 39 6e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 37 3e-04
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 36 7e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 35 0.001
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 35 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.015
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 30 0.026
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 4.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.3
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 9.3
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 47.6 bits (108), Expect = 2e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +1
Query: 67 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 231
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 232 MNWIDKRLSWNAGEW-GCSTWLVSSEXLWRPDVVL 333
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 46.4 bits (105), Expect = 4e-07
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +1
Query: 49 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 207
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 208 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSEXLWRPDVVL 333
+ L+ W D + W+ E+G T L V SE +W PD+VL
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVL 109
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 42.7 bits (96), Expect = 5e-06
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Frame = +1
Query: 37 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 195
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 196 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSEXLWRPDVVL 333
T + ++ W D +L WN ++G T V SE +W PD+VL
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVL 109
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 40.3 bits (90), Expect = 2e-05
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +1
Query: 73 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 240
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 241 IDKRLSWNAGEWGCSTWLVSSEXLWRPD 324
+D+RL++ G+ + + +W+PD
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPD 89
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 40.3 bits (90), Expect = 2e-05
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Frame = +1
Query: 67 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 225
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 226 LQMNWIDKRLSWNAGEWGCSTWL-VSSEXLWRPDVVL 333
++ +W D +L W+ E+G L V S+ +WRPD+VL
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVL 113
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 184 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSEXLWRPDVVLLXAA 345
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 184 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSEXLWRPDVVLLXAA 345
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 184 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSEXLWRPDVVLLXAA 345
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 184 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSEXLWRPDVVLLXAA 345
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 184 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSEXLWRPDVVLLXAA 345
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 184 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSEXLWRPDVVLLXAA 345
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 184 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSEXLWRPDVVLLXAA 345
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ +A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 184 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSEXLWRPDVVLLXAA 345
++ E + A L++ W+D L WN E+ G ++ LW+PD+++ +A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 39.1 bits (87), Expect = 6e-05
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 94 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 252
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 253 LSWNAGEWGCSTWL-VSSEXLWRPDVVL 333
L WN E+G L V SE +W PD+VL
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVL 122
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.5 bits (83), Expect = 2e-04
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 94 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 258
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 259 WNAGEWGCSTWL-VSSEXLWRPDVVL 333
W E+G L V S+ +WRPD+VL
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVL 117
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.5 bits (83), Expect = 2e-04
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 94 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 258
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 259 WNAGEWGCSTWL-VSSEXLWRPDVVL 333
W E+G L V S+ +WRPD+VL
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVL 117
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 36.7 bits (81), Expect = 3e-04
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 145 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSEXLWR 318
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + + +W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 319 PDVVLLXAAATTXGDYALR 375
PD+VL A G+Y +R
Sbjct: 111 PDIVLFNNA---DGNYEVR 126
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 35.5 bits (78), Expect = 7e-04
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Frame = +1
Query: 28 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-N 186
R+ L AIA AA + +++ LL TY+ P +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 187 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSEXLWRPDVVLLXAA 345
+ E + L++ W D + WN ++G L + LW+PDV++ +A
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 35.1 bits (77), Expect = 0.001
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 148 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSEXLWRPD 324
+V L+LH ++ E + + W D L WNA E+ G V +WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 325 VVL 333
+L
Sbjct: 92 TIL 94
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 34.7 bits (76), Expect = 0.001
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +1
Query: 70 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 237
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 238 WIDKRLSWNAGEW-GCSTWLVSSEXLWRPDV 327
W D LSW ++ G + V S+ +W PD+
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDI 129
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.015
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Frame = +1
Query: 94 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 252
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 253 LSWN--AGEWGCSTWLVSSEXLWRPDV 327
L +N G T L + +W PD+
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDL 120
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 30.3 bits (65), Expect = 0.026
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +1
Query: 82 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 246
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 247 KRLSWNAGEWGCSTWLVSSEXLWRPD 324
RLS+ S + E +WRPD
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPD 121
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 4.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 90 GQ*CCVFAFCRTSYSTSEEKPVTRII 13
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 291 PSAAAPLPCVPTQS 250
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.8 bits (44), Expect = 9.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 313 TSXPRTPAKCCSPTPLRSNSVVCRSNSFED 224
T TP + + PL + V CR+N E+
Sbjct: 21 TMPETTPRRKKNKKPLPTECVFCRNNGEEE 50
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,599
Number of Sequences: 438
Number of extensions: 2581
Number of successful extensions: 47
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30839445
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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