Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_C07
(843 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0827 - 25122413-25122430,25122970-25123063,25124210-25124535 32 0.50
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 31 1.5
10_08_0520 - 18495118-18498237 30 2.0
12_02_0180 - 14977508-14977648,14978071-14978283 30 2.7
11_04_0321 - 16359390-16359539,16359674-16359746,16360448-163608... 30 2.7
07_03_0719 + 20920331-20920535,20920588-20920763,20920901-209211... 30 2.7
06_01_0431 + 3066701-3067729 30 2.7
04_04_0101 - 22800360-22800653,22801088-22801249 30 2.7
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 29 3.5
10_08_0824 + 20821724-20822137,20822457-20822543,20822729-208228... 29 3.5
09_03_0006 + 11426346-11426420,11426733-11427452 29 3.5
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 29 3.5
02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166... 29 3.5
01_01_1069 - 8420454-8420670,8421272-8421447,8421556-8421738,842... 29 3.5
01_01_0170 + 1442526-1442618,1442705-1444210,1444312-1444365 29 3.5
03_06_0178 - 32168000-32168128,32168211-32168308,32168412-321684... 29 4.6
01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020... 29 4.6
01_06_1473 - 37619415-37619561,37619649-37619723,37619800-376199... 29 4.6
11_04_0250 + 15335457-15335882 29 6.1
07_01_1093 + 10033403-10033984 29 6.1
03_05_0266 + 22537578-22538081 29 6.1
02_05_0796 + 31800256-31800528,31800635-31800758,31802642-318027... 29 6.1
01_06_0497 - 29804230-29804244,29804294-29804421,29804536-298046... 29 6.1
01_05_0809 - 25422832-25422919,25423887-25424443 29 6.1
03_05_0268 + 22540149-22540204,22541370-22541751 28 8.1
02_05_1274 + 35389179-35389597,35389690-35389919,35391350-353914... 28 8.1
01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313 28 8.1
>06_03_0827 - 25122413-25122430,25122970-25123063,25124210-25124535
Length = 145
Score = 32.3 bits (70), Expect = 0.50
Identities = 38/120 (31%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Frame = +1
Query: 391 RRETQWAVSEKIAGSKPARQVGYVGVEPH*KLLPLTAGALPRTRRKPSRSY*DGGTGFTQ 570
RRE+ AV EK+A S R+ + V P + + G R+ GG
Sbjct: 17 RRESGGAVGEKLAVSPGGRR---LAVSPRCREVASPGG---EGARRGGVGVGRGGERAAS 70
Query: 571 STLHPSRRPPDAGPAAASNMTA-GSLGRRAKSP----IDSAALHLPPERSRDRDLQRRPT 735
RR AG A G GRR SP SA L + ER D+ L RRPT
Sbjct: 71 GGEEQGRRRRRAGNEVAGRPEGRGGAGRRCASPPTCCACSAKLQVALERGDDKALLRRPT 130
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 450 GGVCGSRTSLKTPAAHSRRPTPDQAETQSELLRRRDR 560
GG + + AH+R PTP Q + + + LRRR R
Sbjct: 54 GGAQHAHGGEQLQLAHARTPTPPQQQRRQQQLRRRQR 90
>10_08_0520 - 18495118-18498237
Length = 1039
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 550 GGTGFT-QSTLHPSRRPPDAGPAAASNMTAGSLGR-RAKSPID 672
G TGFT +S + P+R PD +A+ A ++GR R K P D
Sbjct: 126 GATGFTTRSDIGPARAAPDLPDRSAAAAAAPAVGRGRGKPPGD 168
>12_02_0180 - 14977508-14977648,14978071-14978283
Length = 117
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 547 DGGTGFTQSTLHPSRRPPDAGPAAASNMTAGSLGRRAKSPIDSAALHLPP 696
+GG+G S+L P+ PP A+A+ GRR +P SA LPP
Sbjct: 3 EGGSG-GPSSLSPAADPPAVAAASAAAAGGSGGGRRQAAP--SAPSRLPP 49
>11_04_0321 -
16359390-16359539,16359674-16359746,16360448-16360845,
16360919-16362673,16362751-16362861,16363745-16363962,
16364088-16364196
Length = 937
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 513 PDQAETQSELLRRRDRVYAEHITSIPPSPRRRTGGRQQHD 632
P ET ELLR+ VY E +PPSP + G QHD
Sbjct: 137 PTLPETSFELLRK---VYPEITPVVPPSPVEQ-NGNDQHD 172
>07_03_0719 +
20920331-20920535,20920588-20920763,20920901-20921111,
20921240-20921477,20921613-20921763,20921878-20922186
Length = 429
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -3
Query: 682 ARHYQSGSWPVDRGNRRSCCWRPPVRRLG 596
AR Q WPVDRG+RR PP R LG
Sbjct: 12 ARREQQQRWPVDRGDRRPRRRAPP-RLLG 39
>06_01_0431 + 3066701-3067729
Length = 342
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +1
Query: 577 LHPSRRPPDAGPAAASNMTAGSLG--RRAKSPIDSA--ALHLPPERSRDRDLQRRPTSRF 744
+H +R+P PAAAS+ +G +R +S +D+ A PER + R +++RP ++
Sbjct: 74 IHVARQPVAMSPAAASSSQRRRVGPMKRTESAVDATMDATAAAPER-KFRGVRKRPWGKY 132
>04_04_0101 - 22800360-22800653,22801088-22801249
Length = 151
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 547 DGGTGFTQSTLHPSRRPPDAGPAAASNMTAGSLGRRAKSPIDSAALHLPPERSRDRDLQR 726
DGG +++ L S D G AA TAG R + A+ PP+ R+R+ +
Sbjct: 7 DGGRRSSRALLRVS----DGGSAAVDQATAGGQPGRGWLTAGARAMAKPPDLGRERENGK 62
Query: 727 RPTSRFLP 750
+ + R P
Sbjct: 63 KASDRRRP 70
>12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 604 AGPAAASNMTAGSLGRRAKSPIDSAALHLPPERSRDRDLQRRP 732
AG A T SLGR+ KS D + PER R+++ P
Sbjct: 994 AGKLAECQKTIASLGRQLKSLTDIDNTIVEPERLEPREIREMP 1036
>10_08_0824 +
20821724-20822137,20822457-20822543,20822729-20822829,
20822917-20822967,20823616-20823790,20823878-20824192,
20824504-20824707,20824799-20825314,20825400-20825609,
20826092-20826280,20827254-20827405,20827685-20827837,
20827925-20828006,20828086-20828475
Length = 1012
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 82 IFHVMFRTVY*LTMEVSAMPPMPLD 156
+F FRT+Y L+ ++A+PPMP D
Sbjct: 807 LFEDAFRTMYGLSDGITALPPMPND 831
>09_03_0006 + 11426346-11426420,11426733-11427452
Length = 264
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = -2
Query: 662 LLARRPREPAVMLLAAAGPASGGRRDGCNVLCVNPVPPS 546
L R P +PA+++LAA PAS +R C + PVPPS
Sbjct: 23 LRPRHPPKPAIVVLAAP-PASSSQRH-C---AIRPVPPS 56
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +1
Query: 502 GALPRTRRKPSRSY*DGGTGFTQSTLHPSRRPPDAGPAAASNMTAGSLGRRAKSPIDSAA 681
G+ PR +RS+ + + + P R PP A ++A G+ G A S +AA
Sbjct: 282 GSSPRASAASARSWPEMAAP-SSAPGDPGRGPPVALSSSAQGAVQGTAGLMASSATSAAA 340
Query: 682 LHLPPERSRDRDLQR 726
+ PP +++R
Sbjct: 341 MAPPPSAPSLPEVER 355
>02_05_0110 +
25914110-25915006,25915726-25915797,25916411-25916699,
25916864-25916949,25917267-25917490,25917674-25917740,
25917830-25917889,25917995-25918078,25918475-25918555
Length = 619
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +1
Query: 583 PSRRPPDAGPAAASNMTAGS--LGRRAKSPIDSAALHLPPERSRDRDLQRRPTS 738
P RRPP +G M G + A P A L P RD+QR P+S
Sbjct: 120 PPRRPPPSGVDGIGQMFQGPELWTKIASDPTTRAYLEQPDFMQMLRDVQRNPSS 173
>01_01_1069 -
8420454-8420670,8421272-8421447,8421556-8421738,
8421885-8421980,8422064-8422192,8422266-8422445,
8422524-8422634,8422714-8422869,8422983-8423078,
8423160-8423327,8423402-8423642,8423724-8423851,
8424042-8424134,8424214-8424309,8424431-8424523,
8424741-8424850,8424999-8425134,8425215-8425315,
8426029-8426152,8426237-8426411,8426523-8426681,
8427423-8427536,8427669-8427848,8428926-8429005
Length = 1113
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 550 GGTGFTQSTLHPSRRPPDAGPAAASNMTAGSLGRRAKSPIDSAALHLPPERSRDRDLQRR 729
GGT + T H +PP AGP+ A M + + AA LP ++ + +R
Sbjct: 226 GGT-YPPLTAHTPFQPPPAGPSLAGWMANAAAATSSVPSAVVAASSLPVPPNQAVPIMKR 284
Query: 730 PT 735
PT
Sbjct: 285 PT 286
>01_01_0170 + 1442526-1442618,1442705-1444210,1444312-1444365
Length = 550
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 625 NMTAGSLGR-RAKSPIDSAALHLPPERSRDRDL 720
N+ AG LG R SP + AAL+LP + DR+L
Sbjct: 160 NILAGLLGAYRVASPAEEAALNLPSGEAFDRNL 192
>03_06_0178 -
32168000-32168128,32168211-32168308,32168412-32168466,
32169020-32169121,32169221-32169340,32169641-32169699,
32169821-32169959,32170080-32170301
Length = 307
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 494 SQPAPYPGPGGNPVGAIETAGQGLRRAHYIHPAV 595
++PAP P G N V E AG G +R + A+
Sbjct: 37 AEPAPAPAAGSNGVAGEEEAGGGGKREEWYSKAI 70
>01_06_1805 -
39999987-40000169,40000648-40000974,40001724-40002017,
40002112-40002231,40002714-40002776,40003150-40003310,
40003864-40004035
Length = 439
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 425 SPDPNPHGRWGMWESNLTKNSCRSQPAPYPGPGGNP 532
S DP GMW+ S QP PYP G P
Sbjct: 49 SHDPAALYGEGMWQQMTMSGSGAMQPGPYPERSGEP 84
>01_06_1473 -
37619415-37619561,37619649-37619723,37619800-37619919,
37620074-37620127,37620204-37620426,37620506-37620585,
37620675-37620764,37620847-37620960,37621192-37621272,
37621383-37621490,37621677-37621722,37621802-37621899,
37621975-37622148,37622456-37622548,37623229-37623285,
37623399-37623438,37623567-37623685,37624179-37624298,
37624723-37624815,37624940-37625251,37625325-37625444,
37625545-37625658,37625731-37625910,37625996-37626110,
37626195-37626358,37626584-37626769,37626888-37626978,
37627089-37627153,37627223-37627297,37627410-37627493,
37627575-37627742,37628160-37629293
Length = 1579
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +1
Query: 514 RTRRKPSRSY*DGGTGFTQSTLHP---SRRPPDAGPAAAS-NMTAGSLGRRAKSPIDSAA 681
RT S DG G + P S+RPP AAAS + A +G++ S + +++
Sbjct: 98 RTIHSSSDEGSDGEDGAPRKRKQPRPQSKRPPQQSAAAASLSAAAAMMGKQRLSSMFTSS 157
Query: 682 LHLPPERSRDRD 717
+ P R RD
Sbjct: 158 VFRKPGSDRGRD 169
>11_04_0250 + 15335457-15335882
Length = 141
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 681 RGTINRALGPSTEGTGGHVAGG--RRSGVWGTAGWM 580
RG + + GG AGG RR+G WG A WM
Sbjct: 18 RGCAVLRISDRRQSRGGPTAGGGVRRAGGWGGAIWM 53
>07_01_1093 + 10033403-10033984
Length = 193
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 681 RGTINRALGPSTEGTGGHVAGGRRSGVWGTAGW 583
R T N G +GG V GR+ G+W A W
Sbjct: 84 RLTANEHGGRGCRSSGGAVETGRQLGIWEVAKW 116
>03_05_0266 + 22537578-22538081
Length = 167
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 455 GMWESNLTKNSCRSQPAPYPGPGGNPVGAIETAGQGLRR 571
G W+ T PAP P P G + G G RR
Sbjct: 14 GSWQPAATSTPATVSPAPAVSPVAAPAGELGGGGAGARR 52
>02_05_0796 +
31800256-31800528,31800635-31800758,31802642-31802771,
31804336-31804414,31804848-31805133,31805273-31805385
Length = 334
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 665 GLLARRPREPAVMLLAAAGPASGGRRDGCNVLCVNPVPPS 546
G + R E A + P GGRR CN+ + P PS
Sbjct: 90 GFVTFREPESAREAVRNPNPTIGGRRANCNIASMGPPRPS 129
>01_06_0497 -
29804230-29804244,29804294-29804421,29804536-29804688,
29805265-29805574,29805672-29805725
Length = 219
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +1
Query: 547 DGGTGFTQSTLHPSRRPPDAGPAAASNMTAGSLGRRAKSPIDSAALHLPPERSRDRDLQR 726
D G +T P +RP A G G+R K+P+ S P+R + QR
Sbjct: 120 DEDVGIQVTTELPEKRPKVTSLKRAPKAQLGLGGKRPKTPVTSTL----PKRQPIEEAQR 175
Query: 727 RPTSRFLPT 753
S +L T
Sbjct: 176 SKWSNYLDT 184
>01_05_0809 - 25422832-25422919,25423887-25424443
Length = 214
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 222 RPGRLFSHGHPWRITTTPHHRKVQRHRRH 136
+PGR S G PWR + R +RH RH
Sbjct: 64 QPGRCASRGAPWR--PSSQQRDGRRHHRH 90
>03_05_0268 + 22540149-22540204,22541370-22541751
Length = 145
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 649 RRAKSPIDSAALHLPPERSRDRDLQRRPTSRFLP 750
++AK P+D PP R R R R SRF P
Sbjct: 62 KKAKGPLDPPTTPRPPRRRRKRRRSRMFFSRFDP 95
>02_05_1274 +
35389179-35389597,35389690-35389919,35391350-35391414,
35391603-35391902
Length = 337
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = +3
Query: 486 PAAHSRRPTPDQAETQSELLRRRDRVYAEHITSIPPSPRR 605
PA H P P E LL R V++EH S PSPRR
Sbjct: 31 PAGH---PDPSVLERLLRLLASRG-VFSEHTGSSSPSPRR 66
>01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313
Length = 289
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 419 RKSPDPNPHGRWGMWESNLTKNSCRSQPAPYP 514
R+ P HGRW MW + S R + P P
Sbjct: 160 RRRRAPTWHGRWKMWPPATSSGSGRGRYHPIP 191
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,070,050
Number of Sequences: 37544
Number of extensions: 651635
Number of successful extensions: 2845
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2839
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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