Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_C07
(843 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002909-1|AAH02909.2| 456|Homo sapiens chordin-like 1 protein. 31 6.9
AY608914-1|AAU25841.1| 458|Homo sapiens ventroptin protein. 31 6.9
AL591489-2|CAI41337.1| 452|Homo sapiens chordin-like 1 protein. 31 6.9
AL591489-1|CAI41336.1| 450|Homo sapiens chordin-like 1 protein. 31 6.9
AL049176-2|CAI42038.1| 452|Homo sapiens chordin-like 1 protein. 31 6.9
AL049176-1|CAI42037.1| 450|Homo sapiens chordin-like 1 protein. 31 6.9
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 31 6.9
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 31 6.9
AF065164-1|AAC28444.2| 889|Homo sapiens hyperpolarization-activ... 31 6.9
AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization activ... 31 6.9
AB209548-1|BAD92785.1| 437|Homo sapiens chordin-like 1 variant ... 31 6.9
AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein. 30 9.1
AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein. 30 9.1
>BC002909-1|AAH02909.2| 456|Homo sapiens chordin-like 1 protein.
Length = 456
Score = 30.7 bits (66), Expect = 6.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 300 LESHELIYWLAQAPLRGNHSEGAVCRRPGRLFSHGHPW 187
++S + + Q + H G VC G+ +SHG W
Sbjct: 236 MDSQQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESW 273
>AY608914-1|AAU25841.1| 458|Homo sapiens ventroptin protein.
Length = 458
Score = 30.7 bits (66), Expect = 6.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 300 LESHELIYWLAQAPLRGNHSEGAVCRRPGRLFSHGHPW 187
++S + + Q + H G VC G+ +SHG W
Sbjct: 237 MDSQQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESW 274
>AL591489-2|CAI41337.1| 452|Homo sapiens chordin-like 1 protein.
Length = 452
Score = 30.7 bits (66), Expect = 6.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 300 LESHELIYWLAQAPLRGNHSEGAVCRRPGRLFSHGHPW 187
++S + + Q + H G VC G+ +SHG W
Sbjct: 231 MDSQQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESW 268
>AL591489-1|CAI41336.1| 450|Homo sapiens chordin-like 1 protein.
Length = 450
Score = 30.7 bits (66), Expect = 6.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 300 LESHELIYWLAQAPLRGNHSEGAVCRRPGRLFSHGHPW 187
++S + + Q + H G VC G+ +SHG W
Sbjct: 230 MDSQQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESW 267
>AL049176-2|CAI42038.1| 452|Homo sapiens chordin-like 1 protein.
Length = 452
Score = 30.7 bits (66), Expect = 6.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 300 LESHELIYWLAQAPLRGNHSEGAVCRRPGRLFSHGHPW 187
++S + + Q + H G VC G+ +SHG W
Sbjct: 231 MDSQQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESW 268
>AL049176-1|CAI42037.1| 450|Homo sapiens chordin-like 1 protein.
Length = 450
Score = 30.7 bits (66), Expect = 6.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 300 LESHELIYWLAQAPLRGNHSEGAVCRRPGRLFSHGHPW 187
++S + + Q + H G VC G+ +SHG W
Sbjct: 230 MDSQQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESW 267
>AJ133727-1|CAB42630.1| 889|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
channel hHCN2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 6.9
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 401 PSGLCLRKSPDPNPHGRWGMWESNLTKNSCR-SQPAPYPGPGGNPVGAIETAG 556
P+G C R P +P G G SCR + P PGPG E AG
Sbjct: 98 PNGECGRGEPQCSPAGPEGPARGPKVSFSCRGAASGPAPGPGPAEEAGSEEAG 150
>AJ012582-1|CAB42602.1| 889|Homo sapiens
hyperpolarization-activated cation channel HCN2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 6.9
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 401 PSGLCLRKSPDPNPHGRWGMWESNLTKNSCR-SQPAPYPGPGGNPVGAIETAG 556
P+G C R P +P G G SCR + P PGPG E AG
Sbjct: 98 PNGECGRGEPQCSPAGPEGPARGPKVSFSCRGAASGPAPGPGPAEEAGSEEAG 150
>AF065164-1|AAC28444.2| 889|Homo sapiens
hyperpolarization-activated, cyclic nucleotide-gated
channel 2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 6.9
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 401 PSGLCLRKSPDPNPHGRWGMWESNLTKNSCR-SQPAPYPGPGGNPVGAIETAG 556
P+G C R P +P G G SCR + P PGPG E AG
Sbjct: 98 PNGECGRGEPQCSPAGPEGPARGPKVSFSCRGAASGPAPGPGPAEEAGSEEAG 150
>AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 2
protein.
Length = 528
Score = 30.7 bits (66), Expect = 6.9
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 401 PSGLCLRKSPDPNPHGRWGMWESNLTKNSCR-SQPAPYPGPGGNPVGAIETAG 556
P+G C R P +P G G SCR + P PGPG E AG
Sbjct: 98 PNGECGRGEPQCSPAGPEGPARGPKVSFSCRGAASGPAPGPGPAEEAGSEEAG 150
>AB209548-1|BAD92785.1| 437|Homo sapiens chordin-like 1 variant
protein.
Length = 437
Score = 30.7 bits (66), Expect = 6.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 300 LESHELIYWLAQAPLRGNHSEGAVCRRPGRLFSHGHPW 187
++S + + Q + H G VC G+ +SHG W
Sbjct: 216 MDSQQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESW 253
>AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein.
Length = 1341
Score = 30.3 bits (65), Expect = 9.1
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 487 LPLTAGALPRTRRKPSRSY*DGG-TGFTQSTLHPSRRPPDAGPAAASNMTAGSLGRRAKS 663
L L G ++PS +G T H ++ D+ + +S+ ++ S R++S
Sbjct: 536 LALAKGITEECLKQPSLEQKEGRRASHTLLPSHRLKQSADSSSSRSSSSSSSSSRSRSRS 595
Query: 664 PIDSAALHLPPERSRDRDLQRRPT 735
P S + P RS+ RD+ + T
Sbjct: 596 PDSSGSRSHSPLRSKQRDVAQART 619
>AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein.
Length = 1286
Score = 30.3 bits (65), Expect = 9.1
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 487 LPLTAGALPRTRRKPSRSY*DGG-TGFTQSTLHPSRRPPDAGPAAASNMTAGSLGRRAKS 663
L L G ++PS +G T H ++ D+ + +S+ ++ S R++S
Sbjct: 481 LALAKGITEECLKQPSLEQKEGRRASHTLLPSHRLKQSADSSSSRSSSSSSSSSRSRSRS 540
Query: 664 PIDSAALHLPPERSRDRDLQRRPT 735
P S + P RS+ RD+ + T
Sbjct: 541 PDSSGSRSHSPLRSKQRDVAQART 564
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,126,659
Number of Sequences: 237096
Number of extensions: 3225169
Number of successful extensions: 10522
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10502
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -