Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_C07
         (843 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069806-1|AAL39951.1| 1157|Drosophila melanogaster SD04681p pro...    31   1.5  
AE014296-3555|AAN12171.1| 1157|Drosophila melanogaster CG7597-PB...    31   1.5  
AE014296-3554|AAF51738.1| 1157|Drosophila melanogaster CG7597-PA...    31   1.5  
BT012340-1|AAS77465.1|  355|Drosophila melanogaster AT11348p pro...    29   6.0  
AY051895-1|AAK93319.1|  743|Drosophila melanogaster LD38452p pro...    29   8.0  
AE014296-570|AAN11533.1|  743|Drosophila melanogaster CG11494-PB...    29   8.0  
AE014296-569|AAF47721.2|  743|Drosophila melanogaster CG11494-PA...    29   8.0  

>AY069806-1|AAL39951.1| 1157|Drosophila melanogaster SD04681p
           protein.
          Length = 1157

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +3

Query: 471 TSLKTPAAHSRRPTPDQAET--QSELLRRRDRVYAEHITSIPPSPRRRTGGRQQHDRRFP 644
           T++ +  +H+ R +   + T    +   R  R  + ++ S PPSP   +G    H RR P
Sbjct: 444 TTVSSTPSHTTRTSKRASGTGTSGDRYSRSPRTSSRYMESSPPSPVGASGSHHYHHRRSP 503

Query: 645 R 647
           R
Sbjct: 504 R 504


>AE014296-3555|AAN12171.1| 1157|Drosophila melanogaster CG7597-PB,
           isoform B protein.
          Length = 1157

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +3

Query: 471 TSLKTPAAHSRRPTPDQAET--QSELLRRRDRVYAEHITSIPPSPRRRTGGRQQHDRRFP 644
           T++ +  +H+ R +   + T    +   R  R  + ++ S PPSP   +G    H RR P
Sbjct: 444 TTVSSTPSHTTRTSKRASGTGTSGDRYSRSPRTSSRYMESSPPSPVGASGSHHYHHRRSP 503

Query: 645 R 647
           R
Sbjct: 504 R 504


>AE014296-3554|AAF51738.1| 1157|Drosophila melanogaster CG7597-PA,
           isoform A protein.
          Length = 1157

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +3

Query: 471 TSLKTPAAHSRRPTPDQAET--QSELLRRRDRVYAEHITSIPPSPRRRTGGRQQHDRRFP 644
           T++ +  +H+ R +   + T    +   R  R  + ++ S PPSP   +G    H RR P
Sbjct: 444 TTVSSTPSHTTRTSKRASGTGTSGDRYSRSPRTSSRYMESSPPSPVGASGSHHYHHRRSP 503

Query: 645 R 647
           R
Sbjct: 504 R 504


>BT012340-1|AAS77465.1|  355|Drosophila melanogaster AT11348p
           protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 419 RKSPDPNPHG-RWGMWESNLTKNSCRSQPAPYPGPGG 526
           RKSP P+  G      + +L+KN   S PAP P P G
Sbjct: 277 RKSPSPSHDGISPSTSQESLSKNKSGSAPAPTPTPRG 313


>AY051895-1|AAK93319.1|  743|Drosophila melanogaster LD38452p
           protein.
          Length = 743

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 490 PLTAGALPRTRRKPSRSY*DGGTGFTQSTLHPSRRPPDAGPAAAS 624
           PL+AG  P TRRK  R   + G+G   +         DAG  A +
Sbjct: 246 PLSAGTSPATRRKRLRKSSNNGSGDRNNAEEQHNSSLDAGSGAGN 290


>AE014296-570|AAN11533.1|  743|Drosophila melanogaster CG11494-PB,
           isoform B protein.
          Length = 743

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 490 PLTAGALPRTRRKPSRSY*DGGTGFTQSTLHPSRRPPDAGPAAAS 624
           PL+AG  P TRRK  R   + G+G   +         DAG  A +
Sbjct: 246 PLSAGTSPATRRKRLRKSSNNGSGDRNNAEEQHNSSLDAGSGAGN 290


>AE014296-569|AAF47721.2|  743|Drosophila melanogaster CG11494-PA,
           isoform A protein.
          Length = 743

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 490 PLTAGALPRTRRKPSRSY*DGGTGFTQSTLHPSRRPPDAGPAAAS 624
           PL+AG  P TRRK  R   + G+G   +         DAG  A +
Sbjct: 246 PLSAGTSPATRRKRLRKSSNNGSGDRNNAEEQHNSSLDAGSGAGN 290


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,920,349
Number of Sequences: 53049
Number of extensions: 981150
Number of successful extensions: 3975
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3974
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)